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    SCMH1 Scm polycomb group protein homolog 1 [ Gallus gallus (chicken) ]

    Gene ID: 768916, updated on 3-Apr-2024

    Summary

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    Symbol
    SCMH1provided by CGNC
    Full Name
    Scm polycomb group protein homolog 1provided by CGNC
    Primary source
    CGNC:426
    See related
    Ensembl:ENSGALG00010013017
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 23
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 23 NC_052554.1 (1607113..1630127)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 23 NC_052595.1 (1374209..1397575)

    Chromosome 23 - NC_052554.1Genomic Context describing neighboring genes Neighboring gene forkhead box O6 Neighboring gene uncharacterized LOC101751112 Neighboring gene CTP synthase 1 Neighboring gene uncharacterized LOC107055005

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    polycomb protein SCMH1
    Names
    sex comb on midleg homolog 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052554.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      1607113..1630127
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046903651.1 → XP_046759607.1  polycomb protein SCMH1 isoform X1

    2. XM_015297576.4 → XP_015153062.2  polycomb protein SCMH1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YI31
      Related
      ENSGALP00010018196.1, ENSGALT00010031224.1
      Conserved Domains (3) summary
      cd09578
      Location:618 → 688
      SAM_Scm; SAM domain of Scm proteins of Polycomb group
      smart00561
      Location:37 → 132
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      PHA03247
      Location:239 → 377
      PHA03247; large tegument protein UL36; Provisional

    3. XM_015297577.4 → XP_015153063.2  polycomb protein SCMH1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YI36
      Related
      ENSGALP00010018201.1, ENSGALT00010031233.1
      Conserved Domains (3) summary
      cd09578
      Location:574 → 644
      SAM_Scm; SAM domain of Scm proteins of Polycomb group
      smart00561
      Location:37 → 132
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      PHA03247
      Location:239 → 377
      PHA03247; large tegument protein UL36; Provisional

    4. XM_015297578.4 → XP_015153064.2  polycomb protein SCMH1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0YI36
      Conserved Domains (3) summary
      cd09578
      Location:489 → 559
      SAM_Scm; SAM domain of Scm proteins of Polycomb group
      smart00561
      Location:37 → 132
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      PHA03307
      Location:179 → 493
      PHA03307; transcriptional regulator ICP4; Provisional

    5. XM_025143035.3 → XP_024998803.2  polycomb protein SCMH1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YI36
      Conserved Domains (2) summary
      cd09578
      Location:498 → 568
      SAM_Scm; SAM domain of Scm proteins of Polycomb group
      smart00561
      Location:37 → 132
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

    6. XM_046903650.1 → XP_046759606.1  polycomb protein SCMH1 isoform X1

    7. XM_040651962.1 → XP_040507896.1  polycomb protein SCMH1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YI31
      Conserved Domains (3) summary
      cd09578
      Location:618 → 688
      SAM_Scm; SAM domain of Scm proteins of Polycomb group
      smart00561
      Location:37 → 132
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      PHA03247
      Location:239 → 377
      PHA03247; large tegument protein UL36; Provisional

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052595.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      1374209..1397575
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046932201.1 → XP_046788157.1  polycomb protein SCMH1 isoform X1

    2. XM_040690080.2 → XP_040546014.1  polycomb protein SCMH1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YI31
      Conserved Domains (4) summary
      cd09578
      Location:618 → 688
      SAM_Scm; SAM domain of Scm proteins of Polycomb group
      smart00561
      Location:37 → 132
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam12140
      Location:364 → 472
      SLED; SLED domain
      pfam17208
      Location:277 → 330
      RBR; RNA binding Region

    3. XM_040690082.2 → XP_040546016.1  polycomb protein SCMH1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YI36
      Conserved Domains (3) summary
      cd09578
      Location:574 → 644
      SAM_Scm; SAM domain of Scm proteins of Polycomb group
      smart00561
      Location:37 → 132
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      PHA03247
      Location:239 → 377
      PHA03247; large tegument protein UL36; Provisional

    4. XM_040690084.2 → XP_040546018.1  polycomb protein SCMH1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0YI36
      Conserved Domains (3) summary
      cd09578
      Location:489 → 559
      SAM_Scm; SAM domain of Scm proteins of Polycomb group
      smart00561
      Location:37 → 132
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      PHA03307
      Location:179 → 493
      PHA03307; transcriptional regulator ICP4; Provisional

    5. XM_040690083.2 → XP_040546017.1  polycomb protein SCMH1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YI36
      Conserved Domains (3) summary
      cd09578
      Location:498 → 568
      SAM_Scm; SAM domain of Scm proteins of Polycomb group
      smart00561
      Location:37 → 132
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam12140
      Location:244 → 352
      SLED; SLED domain

    6. XM_046932202.1 → XP_046788158.1  polycomb protein SCMH1 isoform X1

    7. XM_040690081.1 → XP_040546015.1  polycomb protein SCMH1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YI31
      Conserved Domains (4) summary
      cd09578
      Location:618 → 688
      SAM_Scm; SAM domain of Scm proteins of Polycomb group
      smart00561
      Location:37 → 132
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam12140
      Location:364 → 472
      SLED; SLED domain
      pfam17208
      Location:277 → 330
      RBR; RNA binding Region
    Nucleotide Protein
    Heading Accession and Version

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