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    RDH16 retinol dehydrogenase 16 [ Canis lupus familiaris (dog) ]

    Gene ID: 474409, updated on 5-Mar-2024

    Summary

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    Official Symbol
    RDH16provided by VGNC
    Official Full Name
    retinol dehydrogenase 16provided by VGNC
    Primary source
    VGNC:VGNC:52599
    See related
    Ensembl:ENSCAFG00845009333
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 10
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 10 NC_051814.1 (1135298..1144806, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 10 NC_006592.4 (1188751..1198258, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 10 NC_049231.1 (1478831..1488339, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 10 NC_049270.1 (1112204..1121711, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 10 NC_049751.1 (1354063..1363571, complement)

    Chromosome 10 - NC_051814.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102155417 Neighboring gene short chain dehydrogenase/reductase family 9C member 7 Neighboring gene G protein-coupled receptor 182 Neighboring gene zinc finger and BTB domain containing 39

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    retinol dehydrogenase 16
    Names
    retinol dehydrogenase 16 (all-trans)
    XP_005625584.1
    XP_005625585.1
    XP_005625586.1
    XP_005625587.1
    XP_013972641.1
    XP_013972642.1
    XP_022279787.1
    XP_038343770.1
    XP_038343771.1
    XP_038343772.1
    XP_038343773.1
    XP_038343774.1
    XP_038343775.1
    XP_038343776.1
    XP_038405662.1
    XP_038405663.1
    XP_038405664.1
    XP_038405665.1
    XP_038405666.1
    XP_038405667.1
    XP_038405668.1
    XP_038469624.1
    XP_038469625.1
    XP_038469626.1
    XP_038469627.1
    XP_038469628.1
    XP_038469629.1
    XP_038469630.1
    XP_038534984.1
    XP_038534986.1
    XP_038534987.1
    XP_038534988.1
    XP_038534989.1
    XP_038534990.1
    XP_038534991.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051814.1 Reference ROS_Cfam_1.0

      Range
      1135298..1144806 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038679056.1 → XP_038534984.1  retinol dehydrogenase 16 isoform X1

      UniProtKB/TrEMBL
      A0A8C0S412, A0A8I3N0Y3
      Related
      ENSCAFP00845012795.1, ENSCAFT00845016450.1
      Conserved Domains (2) summary
      cd09805
      Location:137 → 410
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs
      cl21454
      Location:46 → 98
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    2. XM_038679061.1 → XP_038534989.1  retinol dehydrogenase 16 isoform X2

      UniProtKB/TrEMBL
      A0A8C0N469, A0A8C0R6Z6, A0A8I3N8I3
      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    3. XM_038679063.1 → XP_038534991.1  retinol dehydrogenase 16 isoform X2

      UniProtKB/TrEMBL
      A0A8C0N469, A0A8C0R6Z6, A0A8I3N8I3
      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    4. XM_038679060.1 → XP_038534988.1  retinol dehydrogenase 16 isoform X2

      UniProtKB/TrEMBL
      A0A8C0N469, A0A8C0R6Z6, A0A8I3N8I3
      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    5. XM_038679062.1 → XP_038534990.1  retinol dehydrogenase 16 isoform X2

      UniProtKB/TrEMBL
      A0A8C0N469, A0A8C0R6Z6, A0A8I3N8I3
      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    6. XM_038679059.1 → XP_038534987.1  retinol dehydrogenase 16 isoform X2

      UniProtKB/TrEMBL
      A0A8C0N469, A0A8C0R6Z6, A0A8I3N8I3
      Related
      ENSCAFP00845012821.1, ENSCAFT00845016487.1
      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    7. XM_038679058.1 → XP_038534986.1  retinol dehydrogenase 16 isoform X2

      UniProtKB/TrEMBL
      A0A8C0N469, A0A8C0R6Z6, A0A8I3N8I3
      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    RNA

    1. XR_005433067.1 RNA Sequence

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049270.1 Alternate UMICH_Zoey_3.1

      Range
      1112204..1121711 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038487842.1 → XP_038343770.1  retinol dehydrogenase 16 isoform X1

      Conserved Domains (2) summary
      cd09805
      Location:137 → 410
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs
      cl21454
      Location:46 → 98
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    2. XM_038487846.1 → XP_038343774.1  retinol dehydrogenase 16 isoform X2

      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    3. XM_038487848.1 → XP_038343776.1  retinol dehydrogenase 16 isoform X2

      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    4. XM_038487845.1 → XP_038343773.1  retinol dehydrogenase 16 isoform X2

      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    5. XM_038487847.1 → XP_038343775.1  retinol dehydrogenase 16 isoform X2

      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    6. XM_038487844.1 → XP_038343772.1  retinol dehydrogenase 16 isoform X2

      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    7. XM_038487843.1 → XP_038343771.1  retinol dehydrogenase 16 isoform X2

      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    RNA

    1. XR_005331577.1 RNA Sequence

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049751.1 Alternate UNSW_CanFamBas_1.0

      Range
      1354063..1363571 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038613696.1 → XP_038469624.1  retinol dehydrogenase 16 isoform X1

      Conserved Domains (2) summary
      cd09805
      Location:137 → 410
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs
      cl21454
      Location:46 → 98
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    2. XM_038613700.1 → XP_038469628.1  retinol dehydrogenase 16 isoform X2

      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    3. XM_038613702.1 → XP_038469630.1  retinol dehydrogenase 16 isoform X2

      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    4. XM_038613699.1 → XP_038469627.1  retinol dehydrogenase 16 isoform X2

      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    5. XM_038613701.1 → XP_038469629.1  retinol dehydrogenase 16 isoform X2

      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    6. XM_038613698.1 → XP_038469626.1  retinol dehydrogenase 16 isoform X2

      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    7. XM_038613697.1 → XP_038469625.1  retinol dehydrogenase 16 isoform X2

      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    RNA

    1. XR_005399724.1 RNA Sequence

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049231.1 Alternate UU_Cfam_GSD_1.0

      Range
      1478831..1488339 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038549734.1 → XP_038405662.1  retinol dehydrogenase 16 isoform X1

      UniProtKB/TrEMBL
      A0A8C0S412, A0A8I3N0Y3
      Conserved Domains (2) summary
      cd09805
      Location:137 → 410
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs
      cl21454
      Location:46 → 98
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    2. XM_038549738.1 → XP_038405666.1  retinol dehydrogenase 16 isoform X2

      UniProtKB/TrEMBL
      A0A8C0N469, A0A8C0R6Z6, A0A8I3N8I3
      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    3. XM_038549740.1 → XP_038405668.1  retinol dehydrogenase 16 isoform X2

      UniProtKB/TrEMBL
      A0A8C0N469, A0A8C0R6Z6, A0A8I3N8I3
      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    4. XM_038549737.1 → XP_038405665.1  retinol dehydrogenase 16 isoform X2

      UniProtKB/TrEMBL
      A0A8C0N469, A0A8C0R6Z6, A0A8I3N8I3
      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    5. XM_038549739.1 → XP_038405667.1  retinol dehydrogenase 16 isoform X2

      UniProtKB/TrEMBL
      A0A8C0N469, A0A8C0R6Z6, A0A8I3N8I3
      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    6. XM_038549736.1 → XP_038405664.1  retinol dehydrogenase 16 isoform X2

      UniProtKB/TrEMBL
      A0A8C0N469, A0A8C0R6Z6, A0A8I3N8I3
      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    7. XM_038549735.1 → XP_038405663.1  retinol dehydrogenase 16 isoform X2

      UniProtKB/TrEMBL
      A0A8C0N469, A0A8C0R6Z6, A0A8I3N8I3
      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    RNA

    1. XR_005365287.1 RNA Sequence

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      1188751..1198258 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014117166.3 → XP_013972641.1  retinol dehydrogenase 16 isoform X1

      UniProtKB/TrEMBL
      A0A8C0S412, A0A8I3N0Y3
      Conserved Domains (2) summary
      cd09805
      Location:137 → 410
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs
      cl21454
      Location:46 → 98
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    2. XM_022424079.2 → XP_022279787.1  retinol dehydrogenase 16 isoform X2

      UniProtKB/TrEMBL
      A0A8C0N469, A0A8C0R6Z6, A0A8I3N8I3
      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    3. XM_005625529.4 → XP_005625586.1  retinol dehydrogenase 16 isoform X2

      See identical proteins and their annotated locations for XP_005625586.1

      UniProtKB/TrEMBL
      A0A8C0N469, A0A8C0R6Z6, A0A8I3N8I3
      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    4. XM_005625530.3 → XP_005625587.1  retinol dehydrogenase 16 isoform X2

      See identical proteins and their annotated locations for XP_005625587.1

      UniProtKB/TrEMBL
      A0A8C0N469, A0A8C0R6Z6, A0A8I3N8I3
      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    5. XM_005625527.4 → XP_005625584.1  retinol dehydrogenase 16 isoform X2

      See identical proteins and their annotated locations for XP_005625584.1

      UniProtKB/TrEMBL
      A0A8C0N469, A0A8C0R6Z6, A0A8I3N8I3
      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    6. XM_005625528.4 → XP_005625585.1  retinol dehydrogenase 16 isoform X2

      See identical proteins and their annotated locations for XP_005625585.1

      UniProtKB/TrEMBL
      A0A8C0N469, A0A8C0R6Z6, A0A8I3N8I3
      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    7. XM_014117167.3 → XP_013972642.1  retinol dehydrogenase 16 isoform X2

      UniProtKB/TrEMBL
      A0A8C0N469, A0A8C0R6Z6, A0A8I3N8I3
      Conserved Domains (1) summary
      cd09805
      Location:30 → 303
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

    RNA

    1. XR_002630388.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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