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    CD3D CD3 delta subunit of T-cell receptor complex [ Canis lupus familiaris (dog) ]

    Gene ID: 479419, updated on 5-Mar-2024

    Summary

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    Official Symbol
    CD3Dprovided by VGNC
    Official Full Name
    CD3 delta subunit of T-cell receptor complexprovided by VGNC
    Primary source
    VGNC:VGNC:38954
    See related
    Ensembl:ENSCAFG00845002450
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See CD3D in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 5 NC_051809.1 (15335138..15339065)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 5 NC_006587.4 (15443561..15447497)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 5 NC_049226.1 (15417998..15421934)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 5 NC_049265.1 (15473389..15477325)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 5 NC_049746.1 (15376847..15380783)

    Chromosome 5 - NC_051809.1Genomic Context describing neighboring genes Neighboring gene ubiquitination factor E4A Neighboring gene CD3 gamma subunit of T-cell receptor complex Neighboring gene CD3 epsilon subunit of T-cell receptor complex Neighboring gene U4 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive thymic T cell selection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of alpha-beta T cell receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in external side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    T-cell surface glycoprotein CD3 delta chain
    Names
    CD3d molecule, delta (CD3-TCR complex)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051809.1 Reference ROS_Cfam_1.0

      Range
      15335138..15339065
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038664255.1 → XP_038520183.1  T-cell surface glycoprotein CD3 delta chain

      UniProtKB/TrEMBL
      A0A8C0JJ26, A0A8C0PNZ1, A0A8I3MJ11, A0A8P0NPW3
      Related
      ENSCAFP00845003455.1, ENSCAFT00845004326.1
      Conserved Domains (3) summary
      pfam02189
      Location:146 → 164
      ITAM; Immunoreceptor tyrosine-based activation motif
      pfam16680
      Location:30 → 104
      Ig_4; T-cell surface glycoprotein CD3 delta chain
      cd00096
      Location:25 → 29
      Ig; Ig strand A [structural motif]

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049265.1 Alternate UMICH_Zoey_3.1

      Range
      15473389..15477325
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038477621.1 → XP_038333549.1  T-cell surface glycoprotein CD3 delta chain

      Conserved Domains (3) summary
      pfam02189
      Location:146 → 164
      ITAM; Immunoreceptor tyrosine-based activation motif
      pfam16680
      Location:30 → 104
      Ig_4; T-cell surface glycoprotein CD3 delta chain
      cd00096
      Location:25 → 29
      Ig; Ig strand A [structural motif]

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049746.1 Alternate UNSW_CanFamBas_1.0

      Range
      15376847..15380783
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038599732.1 → XP_038455660.1  T-cell surface glycoprotein CD3 delta chain

      Conserved Domains (3) summary
      pfam02189
      Location:146 → 164
      ITAM; Immunoreceptor tyrosine-based activation motif
      pfam16680
      Location:30 → 104
      Ig_4; T-cell surface glycoprotein CD3 delta chain
      cd00096
      Location:25 → 29
      Ig; Ig strand A [structural motif]

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049226.1 Alternate UU_Cfam_GSD_1.0

      Range
      15417998..15421934
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038535510.1 → XP_038391438.1  T-cell surface glycoprotein CD3 delta chain

      UniProtKB/TrEMBL
      A0A8C0JJ26, A0A8C0PNZ1, A0A8I3MJ11, A0A8P0NPW3
      Conserved Domains (3) summary
      pfam02189
      Location:146 → 164
      ITAM; Immunoreceptor tyrosine-based activation motif
      pfam16680
      Location:30 → 104
      Ig_4; T-cell surface glycoprotein CD3 delta chain
      cd00096
      Location:25 → 29
      Ig; Ig strand A [structural motif]

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006587.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      15443561..15447497
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_536556.6 → XP_536556.1  T-cell surface glycoprotein CD3 delta chain

      UniProtKB/TrEMBL
      A0A8C0JJ26, A0A8C0PNZ1, A0A8I3MJ11, A0A8P0NPW3
      Conserved Domains (3) summary
      pfam02189
      Location:146 → 164
      ITAM; Immunoreceptor tyrosine-based activation motif
      pfam16680
      Location:30 → 104
      Ig_4; T-cell surface glycoprotein CD3 delta chain
      cd00096
      Location:25 → 29
      Ig; Ig strand A [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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