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    SLC23A1 solute carrier family 23 member 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 478025, updated on 5-Mar-2024

    Summary

    Official Symbol
    SLC23A1provided by VGNC
    Official Full Name
    solute carrier family 23 member 1provided by VGNC
    Primary source
    VGNC:VGNC:46282
    See related
    Ensembl:ENSCAFG00845000694
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See SLC23A1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 2 NC_051806.1 (35148002..35162589, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 2 NC_006584.4 (31801133..31809319, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 2 NC_049223.1 (33823283..33831469, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 2 NC_049262.1 (32205366..32213552, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 2 NC_049743.1 (33071664..33079850, complement)

    Chromosome 2 - NC_051806.1Genomic Context describing neighboring genes Neighboring gene disco interacting protein 2 homolog C Neighboring gene zinc finger MYND-type containing 11 Neighboring gene uncharacterized LOC119870179 Neighboring gene poly(A) binding protein interacting protein 2 Neighboring gene proline rich basic protein 1 Neighboring gene marginal zone B and B1 cell specific protein

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    solute carrier family 23 member 1
    Names
    solute carrier family 23 (nucleobase transporters), member 1
    solute carrier family 23 (nucleobase transporters), member 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109957.1NP_001103427.1  solute carrier family 23 member 1

      See identical proteins and their annotated locations for NP_001103427.1

      Status: PROVISIONAL

      Source sequence(s)
      EU125351
      UniProtKB/TrEMBL
      A0A8P0SB69, A8CX01
      Conserved Domains (2) summary
      pfam00860
      Location:52483
      Xan_ur_permease; Permease family
      cl23746
      Location:35489
      HCO3_cotransp; HCO3- transporter family

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051806.1 Reference ROS_Cfam_1.0

      Range
      35148002..35162589 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038657796.1XP_038513724.1  solute carrier family 23 member 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0MAC2, A0A8C0PZK3, A0A8I3MBA0
      Related
      ENSCAFP00845000879.1, ENSCAFT00845001158.1
      Conserved Domains (1) summary
      pfam00860
      Location:88519
      Xan_ur_permease; Permease family

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049262.1 Alternate UMICH_Zoey_3.1

      Range
      32205366..32213552 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049743.1 Alternate UNSW_CanFamBas_1.0

      Range
      33071664..33079850 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049223.1 Alternate UU_Cfam_GSD_1.0

      Range
      33823283..33831469 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006584.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      31801133..31809319 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)