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    LMO3 LIM domain only 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701893, updated on 5-Mar-2024

    Summary

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    Official Symbol
    LMO3provided by VGNC
    Official Full Name
    LIM domain only 3provided by VGNC
    Primary source
    VGNC:VGNC:100072
    Locus tag
    EGK_03435
    See related
    Ensembl:ENSMMUG00000040307
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 11
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (17975918..18038299, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (17304577..17366981, complement)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene microsomal glutathione S-transferase 1 Neighboring gene uncharacterized LOC107000782 Neighboring gene aspartate aminotransferase, mitochondrial-like Neighboring gene uncharacterized LOC107000784 Neighboring gene RNA-binding protein with serine-rich domain 1 pseudogene Neighboring gene uncharacterized LOC107000785

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LIM domain only protein 3
    Names
    LIM domain only 3 (rhombotin-like 2)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266306.1 → NP_001253235.1  LIM domain only protein 3

      See identical proteins and their annotated locations for NP_001253235.1

      Status: PROVISIONAL

      Source sequence(s)
      JU319745
      UniProtKB/TrEMBL
      H9EM92
      Related
      ENSMMUP00000072061.1, ENSMMUT00000092153.1
      Conserved Domains (2) summary
      cd09388
      Location:13 → 67
      LIM1_LMO1_LMO3; The first LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)
      cd09389
      Location:77 → 131
      LIM2_LMO1_LMO3; The second LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      17975918..18038299 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015151108.2 → XP_015006594.1  LIM domain only protein 3 isoform X3

      UniProtKB/TrEMBL
      H9EM92
      Conserved Domains (2) summary
      cd09388
      Location:13 → 67
      LIM1_LMO1_LMO3; The first LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)
      cd09389
      Location:77 → 131
      LIM2_LMO1_LMO3; The second LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)

    2. XM_015151103.2 → XP_015006589.1  LIM domain only protein 3 isoform X1

      UniProtKB/TrEMBL
      F6S340
      Related
      ENSMMUP00000025374.4, ENSMMUT00000027125.4
      Conserved Domains (2) summary
      cd09388
      Location:55 → 109
      LIM1_LMO1_LMO3; The first LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)
      cd09389
      Location:119 → 173
      LIM2_LMO1_LMO3; The second LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)

    3. XM_015151105.2 → XP_015006591.1  LIM domain only protein 3 isoform X3

      UniProtKB/TrEMBL
      H9EM92
      Conserved Domains (2) summary
      cd09388
      Location:13 → 67
      LIM1_LMO1_LMO3; The first LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)
      cd09389
      Location:77 → 131
      LIM2_LMO1_LMO3; The second LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)

    4. XM_015151106.2 → XP_015006592.1  LIM domain only protein 3 isoform X3

      UniProtKB/TrEMBL
      H9EM92
      Related
      ENSMMUP00000019682.4, ENSMMUT00000021052.4
      Conserved Domains (2) summary
      cd09388
      Location:13 → 67
      LIM1_LMO1_LMO3; The first LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)
      cd09389
      Location:77 → 131
      LIM2_LMO1_LMO3; The second LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)

    5. XM_015151107.2 → XP_015006593.1  LIM domain only protein 3 isoform X3

      UniProtKB/TrEMBL
      H9EM92
      Conserved Domains (2) summary
      cd09388
      Location:13 → 67
      LIM1_LMO1_LMO3; The first LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)
      cd09389
      Location:77 → 131
      LIM2_LMO1_LMO3; The second LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)

    6. XM_028828848.1 → XP_028684681.1  LIM domain only protein 3 isoform X3

      UniProtKB/TrEMBL
      H9EM92
      Conserved Domains (2) summary
      cd09388
      Location:13 → 67
      LIM1_LMO1_LMO3; The first LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)
      cd09389
      Location:77 → 131
      LIM2_LMO1_LMO3; The second LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)

    7. XM_015151104.2 → XP_015006590.1  LIM domain only protein 3 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QJ35, A0A663DD10, A0A8J8XM88, F6YLE0
      Related
      ENSMMUP00000048057.2, ENSMMUT00000056345.2
      Conserved Domains (2) summary
      cd09388
      Location:24 → 78
      LIM1_LMO1_LMO3; The first LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)
      cd09389
      Location:88 → 142
      LIM2_LMO1_LMO3; The second LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)

    8. XM_028828849.1 → XP_028684682.1  LIM domain only protein 3 isoform X4

      Conserved Domains (1) summary
      cd09388
      Location:55 → 109
      LIM1_LMO1_LMO3; The first LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)
    Nucleotide Protein
    Heading Accession and Version

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