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    CG34316 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 5740757, updated on 10-May-2024

    Summary

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    Official Symbol
    CG34316provided by FlyBase
    Primary source
    FLYBASE:FBgn0085345
    Locus tag
    Dmel_CG34316
    See related
    AllianceGenome:FB:FBgn0085345
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG34316; Dm_3R:60797; JHBP
    Orthologs
    all
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    Genomic context

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    See CG34316 in Genome Data Viewer
    Location:
    88E3-88E3; 3-56 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (15230585..15231686)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (11056307..11057408)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Arginine methyltransferase 3 Neighboring gene antisense RNA:CR43471 Neighboring gene mitochondrial ribosomal protein S10 Neighboring gene telomere fusion Neighboring gene Heat shock protein 70 cognate 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A set of structural features defines the cis-regulatory modules of antenna-expressed genes in Drosophila melanogaster. López Y, et al. PLoS One, 2014. PMID 25153327, Free PMC Article
    2. First transcriptome profiling of D. melanogaster after development in a deep underground low radiation background laboratory. Zarubin M, et al. PLoS One, 2021. PMID 34351964, Free PMC Article
    3. Transcriptomic analysis of inbreeding depression in cold-sensitive Drosophila melanogaster shows upregulation of the immune response. Vermeulen CJ, et al. J Evol Biol, 2013 Sep. PMID 23944235
    4. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
    5. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in multicellular organismal reproductive process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG34316-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      15230585..15231686
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001104328.2 → NP_001097798.1  uncharacterized protein Dmel_CG34316 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097798.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1A6X9, A2VET7
      Conserved Domains (1) summary
      cl12117
      Location:32 → 231
      JHBP; Haemolymph juvenile hormone binding protein (JHBP)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1A6X9 A1A6X9

    Gene LinkOut

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