Mouse Genome Issue MG-4409

Summary:

There is an over-expansion in GRCm38 chr. 14

Description:

The mouse genomes project has reported a possible artificial expansion of the reference assembly at NC_000080.6: 25,989,274-26,303,829.

Status:

Resolved (GRC Resolved by Electronic Means)

Type:

Path Problem

Last updated:

2020-07-22

Affects version:

GRCm38

Fix version:

GRCm39

Resolution:

Review confirms the over-expansion, and AC175032.1, AC174723.2 and AC174479.2 have been removed from the assembly.

Patches and alternate loci

No patches or alts are associated with MG-4409.

Locations and genomic context

Select a placement below to display it in the Sequence Viewer.

• GRCm39 chr14:25,874,699-26,177,118 (View region: Ensembl | NCBI | UCSC)
• GRCm38.p6 chr14:25,874,275-26,455,963 (View region: Ensembl | NCBI | UCSC)
• MGSCv37 chr14:26,693,761-27,275,449 (View region: Ensembl | NCBI | UCSC)