CancerNext-Expanded®
Clinical Genetic Test
Help
offered by
GTR Test Accession: Help GTR000560508.9
NYS CLEP
CAP
INHERITED DISEASECANCERSYNDROMIC DISEASE ... View more
Last updated in GTR: 2024-03-20
Last annual review date for the lab: 2024-03-22 LinkOut
At a Glance
Diagnosis; Pre-symptomatic
Hereditary cancer-predisposing syndrome; Acrodysostosis 1 with or without hormone resistance; Adrenocortical carcinoma, hereditary; ...
AIP (11q13.2), ALK (2p23.2-23.1), APC (5q22.2), ATM (11q22.3), AXIN2 (17q24.1), ...
Molecular Genetics - Deletion/duplication analysis: Next-Generation (NGS)/Massively parallel sequencing (MPS); ...
Not provided
Clinical validity depends on specific clinical and family history.
Not provided
Ordering Information
Offered by: Help
Specimen Source: Help
Who can order: Help
  • Genetic Counselor
  • Health Care Provider
  • Licensed Physician
  • Nurse Practitioner
Test Order Code: Help
8874
Lab contact: Help
Monalyn Salvador, MS, CGC, Manager, Product Management - Oncology
mumali@ambrygen.com
949-457-8961
How to Order: Help
Test service: Help
Clinical Testing/Confirmation of Mutations Identified Previously
    OrderCode: 5555
Test development: Help
Test developed by laboratory (no manufacturer test name)
Informed consent required: Help
Based on applicable state law
Pre-test genetic counseling required: Help
Decline to answer
Post-test genetic counseling required: Help
Decline to answer
Recommended fields not provided:
Conditions Help
Total conditions: 121
Condition/Phenotype Identifier
Test Targets
Genes Help
Total genes: 71
Gene Associated Condition Germline or Somatic Allele (Lab-provided) Variant in NCBI
Methodology
Total methods: 2
Method Category Help
Test method Help
Instrument *
Deletion/duplication analysis
Next-Generation (NGS)/Massively parallel sequencing (MPS)
Sequence analysis of the entire coding region
Next-Generation (NGS)/Massively parallel sequencing (MPS)
* Instrument: Not provided
Clinical Information
Test purpose: Help
Diagnosis; Pre-symptomatic
Clinical validity: Help
Clinical validity depends on specific clinical and family history.
Variant Interpretation:
Will the lab re-contact the ordering physician if variant interpretation changes? Help
Yes.
Recommended fields not provided:
Technical Information
Test Confirmation: Help
Single nucleotide variant calls not satisfying 100x depth of coverage and 40% het ratio thresholds are verified by Sanger sequencing (Mu W et al. J Mol Diagn. 2016 Oct 4. PubMed PMID: 27720647). Gross deletion/duplication analysis is performed for all genes using a custom pipeline based on read-depth from NGS … View more
Test Comments: Help
Prenatal testing may be available. Please contact the lab for details.
Availability: Help
Tests performed
Entire test performed in-house
Analytical Validity: Help
This test is designed and validated to be capable of detecting >99% of described mutations in the gene(s) represented.
Proficiency testing (PT):
Is proficiency testing performed for this test? Help
Yes

Method used for proficiency testing: Help
Formal PT program

PT Provider: Help
American College of Medical Genetics / College of American Pathologists, ACMG/CAP
Recommended fields not provided:
Regulatory Approval
FDA Review: Help
Category: FDA exercises enforcement discretion
NYS CLEP Approval: Help
Number: 73884
Status: Approved
Additional Information

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