Vascular Anomalies (VANseq) Expanded Sequencing Panel
GTR Test Accession: Help GTR000570484.6
CAP
INHERITED DISEASECARDIOVASCULARIMMUNOLOGY ... View more
Last updated in GTR: 2023-09-29
Last annual review date for the lab: 2023-09-29 LinkOut
At a Glance
Diagnosis
Capillary malformation; Abnormality of the lymphatic system; Arteriovenous malformation; ...
ACVRL1 (12q13.13), ANGPT2 (8p23.1), ARAF (Xp11.3), BRAF (7q34), CCBE1 (18q21.32), ...
Molecular Genetics - Sequence analysis of the entire coding region: Next-Generation (NGS)/Massively parallel sequencing (MPS)
Not provided
Not provided
Not provided
Ordering Information
Offered by: Help
Seattle Children's Hospital Genetics Laboratories
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Test short name: Help
VANseq Expanded Sequencing Panel
Specimen Source: Help
Who can order: Help
  • Health Care Provider
Test Order Code: Help
VANseq Test code LAB1920
View other test codes
CPT codes: Help
**AMA CPT codes notice
How to Order: Help
Test development: Help
Test developed by laboratory (no manufacturer test name)
Informed consent required: Help
No
Pre-test genetic counseling required: Help
No
Post-test genetic counseling required: Help
No
Recommended fields not provided:
Conditions Help
Total conditions: 50
Condition/Phenotype Identifier
Test Targets
Genes Help
Total genes: 47
Gene Associated Condition Germline or Somatic Allele (Lab-provided) Variant in NCBI
Methodology
Total methods: 1
Method Category Help
Test method Help
Instrument *
Sequence analysis of the entire coding region
Next-Generation (NGS)/Massively parallel sequencing (MPS)
* Instrument: Not provided
Clinical Information
Test purpose: Help
Diagnosis
Recommended fields not provided:
Technical Information
Availability: Help
Tests performed
Entire test performed in-house
Analytical Validity: Help
Target region includes coding exons and a minimum of 25 bp of flanking intron boundaries of the genes tested. Average coverage >1,000x, depth of coverage for all target regions is at least 20x. Sensitivity, specificity, and positive predictive value (PPV) of this test to detect single base-pair substitutions in coding … View more
Proficiency testing (PT):
Is proficiency testing performed for this test? Help
Yes

Method used for proficiency testing: Help
Formal PT program

PT Provider: Help
American College of Medical Genetics / College of American Pathologists, ACMG/CAP

CAP Testing Information Help
Next-Generation Sequencing-Solid Tumor; Next-generation sequencing; NGSST
Recommended fields not provided:
Regulatory Approval
FDA Review: Help
Category: FDA exercises enforcement discretion
Additional Information

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