UCSF Molecular Diagnostics Laboratory
GTR Test Accession: Help GTR000600647.1
Last updated in GTR: 2022-10-27
Last annual review date for the lab: 2022-10-27 Past due LinkOut
At a Glance
Diagnosis; Monitoring; Prognostic
Acute myeloid leukemia; Juvenile myelomonocytic leukemia; Myelodysplastic syndrome; ...
ABL1 (9q34.12), ASXL1 (20q11.21), BCOR (Xp11.4), BCORL1 (Xq26.1), BRAF (7q34), ...
Molecular Genetics - Sequence analysis of the entire coding region: Next-Generation (NGS)/Massively parallel sequencing (MPS)
Acute Myeloid Leukemia (AML), Myelodysplastic Syndrome (MDS), Primary Myelofibrosis (PMF), …
Not provided
Not provided
Ordering Information
Offered by: Help
UCSF Molecular Diagnostics Laboratory
View lab's website
View lab's test page
Test short name: Help
Specimen Source: Help
Who can order: Help
  • Licensed Physician
CPT codes: Help
**AMA CPT codes notice
Lab contact: Help
Erik Samayoa, CLS, Laboratory Supervisor
Contact Policy: Help
Laboratory can only accept contact from health care providers. Patients/families are encouraged to discuss genetic testing options with their health care provider.
How to Order: Help
Blood: 3 mL
Bone marrow aspirate: 3 mL
FFPE: 10 micron sections x5 on uncharged, unstained, glass slides
Germline Sample: Collect 4-6 cytobrushes/cotton swabs on each side of the mouth, place swabs in transport tubes, 2 swabs per tube.
Order URL
Test service: Help
Clinical Testing/Confirmation of Mutations Identified Previously
Test development: Help
Test developed by laboratory (no manufacturer test name)
Informed consent required: Help
Pre-test genetic counseling required: Help
Post-test genetic counseling required: Help
Recommended fields not provided:
Conditions Help
Total conditions: 4
Condition/Phenotype Identifier
Test Targets
Genes Help
Total genes: 52
Gene Associated Condition Germline or Somatic Allele (Lab-provided) Variant in NCBI
Total methods: 1
Method Category Help
Test method Help
Instrument *
Sequence analysis of the entire coding region
Next-Generation (NGS)/Massively parallel sequencing (MPS)
* Instrument: Not provided
Clinical Information
Test purpose: Help
Diagnosis; Monitoring; Prognostic
Target population: Help
Acute Myeloid Leukemia (AML), Myelodysplastic Syndrome (MDS), Primary Myelofibrosis (PMF), Myeloid malignancies
Recommended fields not provided:
Technical Information
Test Procedure: Help
Exons Capture for DNA Library
Test Platform:
Illumina MiSeq
Availability: Help
Tests performed
Entire test performed in-house
Interpretation performed in-house
Report generated in-house
Specimen preparation performed in-house
Wet lab work performed in-house
Analytical Validity: Help
Variant Allele Frequency (VAF) greater or equal to 1%
Proficiency testing (PT):
Is proficiency testing performed for this test? Help

Method used for proficiency testing: Help
Formal PT program

PT Provider: Help
College of American Pathologists, CAP

Description of PT method: Help
Next Generation Sequencing
Recommended fields not provided:
Regulatory Approval
FDA Review: Help
Not provided
Additional Information

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