Entry - #618522 - INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL DOMINANT 59; MRD59 - OMIM
 
# 618522

INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL DOMINANT 59; MRD59


Alternative titles; symbols

MENTAL RETARDATION, AUTOSOMAL DOMINANT 59


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
10q22.2 Intellectual developmental disorder, autosomal dominant 59 618522 AD 3 CAMK2G 602123
Clinical Synopsis
 
Phenotypic Series
 

INHERITANCE
- Autosomal dominant
GROWTH
Height
- Short stature, mild
HEAD & NECK
Head
- Large head circumference
Face
- Dysmorphic facial features, mild, variable
- Tall forehead
- Narrow forehead
- Flat forehead
- Flat face
- Round cheeks
- Long philtrum
- Facial hypotonia
Ears
- Prominent ears
- Low-set ears
Eyes
- Myopia
- Long palpebral fissures
- Arched eyebrows
- Glaucoma, juvenile
Nose
- Tubular nose
- Full nasal tip
SKELETAL
Hands
- Short hands
- Brachydactyly
Feet
- Short feet
- Large first toes
SKIN, NAILS, & HAIR
Skin
- Vascular malformations (1 patient)
Nails
- Brittle nails (1 patient)
MUSCLE, SOFT TISSUES
- Hypotonia
NEUROLOGIC
Central Nervous System
- Global developmental delay
- Impaired intellectual development
- Impaired language development
- No seizures
Behavioral Psychiatric Manifestations
- Autistic features
MISCELLANEOUS
- Two unrelated patients have been reported (last curated July 2019)
- Non-neurologic features are variable
- De novo mutation
MOLECULAR BASIS
- Caused by mutation in the calcium/calmodulin-dependent protein kinase II-gamma gene (CAMK2G, 602123.0001)
Intellectual developmental disorder, autosomal dominant - PS156200 - 66 Entries
Location Phenotype Inheritance Phenotype
mapping key
Phenotype
MIM number
Gene/Locus Gene/Locus
MIM number
1p36.11 Coffin-Siris syndrome 2 AD 3 614607 ARID1A 603024
1q21.3 White-Sutton syndrome AD 3 616364 POGZ 614787
1q21.3 GAND syndrome AD 3 615074 GATAD2B 614998
1q22 Intellectual developmental disorder, autosomal dominant 52 AD 3 617796 ASH1L 607999
1q44 Intellectual developmental disorder, autosomal dominant 22 AD 3 612337 ZBTB18 608433
2p25.3 Intellectual developmental disorder, autosomal dominant 39 AD 3 616521 MYT1L 613084
2q11.2 ?Intellectual developmental disorder, autosomal dominant 69 3 617863 LMAN2L 609552
2q23.1 Intellectual developmental disorder, autosomal dominant 1 AD 3 156200 MBD5 611472
3p25.3 Intellectual developmental disorder, autosomal dominant 23 AD 3 615761 SETD5 615743
3p21.31 Intellectual developmental disorder, autosomal dominant 70 AD 3 620157 SETD2 612778
3q22.3 Intellectual developmental disorder, autosomal dominant 47 AD 3 617635 STAG1 604358
3q26.32 Intellectual developmental disorder, autosomal dominant 41 AD 3 616944 TBL1XR1 608628
3q27.1 Intellectual developmental disorder 60 with seizures AD 3 618587 AP2M1 601024
4q31.1 Intellectual developmental disorder, autosomal dominant 50, with behavioral abnormalities AD 3 617787 NAA15 608000
5p15.2 Intellectual developmental disorder, autosomal dominant 63, with macrocephaly AD 3 618825 TRIO 601893
5p15.2 Intellectual developmental disorder, autosomal dominant 44, with microcephaly AD 3 617061 TRIO 601893
5q13.3 Intellectual developmental disorder, autosomal dominant 34 AD 3 616351 COL4A3BP 604677
5q32 Intellectual developmental disorder, autosomal dominant 53 AD 3 617798 CAMK2A 114078
5q33.2 Intellectual developmental disorder, autosomal dominant 67 AD 3 619927 GRIA1 138248
6p21.32 Intellectual developmental disorder, autosomal dominant 5 AD 3 612621 SYNGAP1 603384
6q13 Intellectual developmental disorder, autosomal dominant 46 AD 3 617601 KCNQ5 607357
6q14.3 Intellectual developmental disorder, autosomal dominant 64 AD 3 619188 ZNF292 616213
6q22.1 Intellectual developmental disorder, autosomal dominant 55, with seizures AD 3 617831 NUS1 610463
6q24.2 Intellectual developmental disorder, autosomal dominant 43 AD 3 616977 HIVEP2 143054
6q25.3 Coffin-Siris syndrome 1 AD 3 135900 ARID1B 614556
7p22.1 Intellectual developmental disorder, autosomal dominant 48 AD 3 617751 RAC1 602048
7p13 Intellectual developmental disorder, autosomal dominant 54 AD 3 617799 CAMK2B 607707
7q11.22 Intellectual developmental disorder, autosomal dominant 26 AD 3 615834 KIAA0442 607270
7q36.2 Intellectual developmental disorder, autosomal dominant 33 AD 3 616311 DPP6 126141
9p24 Intellectual developmental disorder, autosomal dominant 2 AD 4 614113 MRD2 614113
9q34.11 Intellectual developmental disorder, autosomal dominant 58 AD 3 618106 SET 600960
9q34.3 Kleefstra syndrome 1 AD 3 610253 EHMT1 607001
10p15.3 Intellectual developmental disorder, autosomal dominant 30 AD 3 616083 ZMYND11 608668
10q22.2 Intellectual developmental disorder, autosomal dominant 59 AD 3 618522 CAMK2G 602123
11p15.5 Vulto-van Silfout-de Vries syndrome AD 3 615828 DEAF1 602635
11q13.1 Coffin-Siris syndrome 7 AD 3 618027 DPF2 601671
11q13.1-q13.2 Schuurs-Hoeijmakers syndrome AD 3 615009 PACS1 607492
11q13.2 Intellectual developmental disorder, autosomal dominant 51 AD 3 617788 KMT5B 610881
11q24.2 Intellectual developmental disorder, autosomal dominant 4 AD 2 612581 MRD4 612581
12p13.1 Intellectual developmental disorder, autosomal dominant 6, with or without seizures AD 3 613970 GRIN2B 138252
12q12 Coffin-Siris syndrome 6 AD 3 617808 ARID2 609539
12q13.12 Intellectual developmental disorder, autosomal dominant, FRA12A type AD 3 136630 DIP2B 611379
12q13.2 Coffin-Siris syndrome 8 AD 3 618362 SMARCC2 601734
12q21.33 Intellectual developmental disorder, autosomal dominant 66 AD 3 619910 ATP2B1 108731
14q11.2 Intellectual developmental disorder, autosomal dominant 74 AD 3 620688 HNRNPC 164020
15q21.3 Intellectual developmental disorder, autosomal dominant 71, with behavioral abnormalities AD 3 620330 RFX7 612660
16p13.3 Intellectual developmental disorder, autosomal dominant 72 AD 3 620439 SRRM2 606032
16q22.1 Intellectual developmental disorder, autosomal dominant 21 AD 3 615502 CTCF 604167
16q24.3 Intellectual developmental disorder, autosomal dominant 3 AD 3 612580 CDH15 114019
17p13.1 Intellectual developmental disorder, autosomal dominant 62 AD 3 618793 DLG4 602887
17q21.2 Coffin-Siris syndrome 5 AD 3 616938 SMARCE1 603111
17q21.31 Koolen-De Vries syndrome AD 3 610443 KANSL1 612452
17q23.1 Intellectual developmental disorder, autosomal dominant 56 AD 3 617854 CLTC 118955
17q23.2 Intellectual developmental disorder, autosomal dominant 61 AD 3 618009 MED13 603808
17q23.2 Intellectual developmental disorder, autosomal dominant 57 AD 3 618050 TLK2 608439
18q12.3 Intellectual developmental disorder, autosomal dominant 29 AD 3 616078 SETBP1 611060
19p13.3 Intellectual developmental disorder, autosomal dominant 65 AD 3 619320 KDM4B 609765
19p13.2 Coffin-Siris syndrome 4 AD 3 614609 SMARCA4 603254
19q13.12 Intellectual developmental disorder, autosomal dominant 68 AD 3 619934 KMT2B 606834
19q13.2 Intellectual developmental disorder, autosomal dominant 45 AD 3 617600 CIC 612082
20q11.23 ?Intellectual developmental disorder, autosomal dominant 11 AD 3 614257 EPB41L1 602879
20q13.33 Intellectual developmental disorder, autosomal dominant 73 AD 3 620450 TAF4 601796
20q13.33 Intellectual developmental disorder, autosomal dominant 38 AD 3 616393 EEF1A2 602959
21q22.13 Intellectual developmental disorder, autosomal dominant 7 AD 3 614104 DYRK1A 600855
22q11.23 Coffin-Siris syndrome 3 AD 3 614608 SMARCB1 601607
22q12.3 ?Intellectual developmental disorder, autosomal dominant 10 AD 3 614256 CACNG2 602911

TEXT

A number sign (#) is used with this entry because of evidence that autosomal dominant intellectual developmental disorder-59 (MRD59) is caused by heterozygous mutation in the CAMK2G gene (602123) on chromosome 10q22.


Clinical Features

De Ligt et al. (2012) reported a boy with severe intellectual disability with myopia, strabismus, short stature, flat face with narrow forehead, long palpebral fissures, arched eyebrows, sacral dimple, short hands, brachydactyly, and short feet. He walked at age 5 years and started to speak at age 4 years. He also had behavioral abnormalities, including self-mutilation. Laboratory studies suggested mitochondrial dysfunction without mitochondrial gene defects. Proietti Onori et al. (2018) provided follow-up of the patient reported by de Ligt et al. (2012). At age 16.5 years, he had severely impaired intellectual development (IQ less than 35) and very poor speech. He did not have seizures; juvenile-onset glaucoma was noted. Brain imaging showed no structural abnormalities.

Proietti Onori et al. (2018) reported a 5-year-old boy who presented in infancy with generalized hypotonia and developmental delay with impaired speech and language, as well as autism. He had mild dysmorphic features, including relative macrocephaly, prominent capillary vascular malformations on the forehead and glabella, tall forehead, tubular nose with upturned tip, large ears, round cheeks, and facial hypotonia. He did not have seizures, and brain imaging was normal. The authors noted that both this patient and the patient previously reported by de Ligt et al. (2012) had some facial dysmorphisms, though not strikingly similar.


Inheritance

The heterozygous mutations in the CAMK2G gene that were identified in patients with MRD59 by de Ligt et al. (2012) and Proietti Onori et al. (2018) occurred de novo.


Molecular Genetics

In a boy with MRD59, de Ligt et al. (2012) identified a de novo heterozygous missense mutation in the CAMK2G gene (R292P; 602123.0001). The patient was ascertained from a larger cohort of 100 patients with severe intellectual disability who underwent exome sequencing. Functional studies of the variant were not performed. The patient had normal array and MLL2 testing.

Proietti Onori et al. (2018) identified a de novo heterozygous R292P mutation in a 5-year-old boy with MRD59 and noted that the substitution occurs in an autoregulatory domain that maintains the kinase in an inactive state in the absence of calcium/calmodulin. Detailed in vitro and in vivo functional studies in mouse primary hippocampal cells and in mouse embryos showed that the mutant protein caused decreased neurite length and arborization, as well as impaired neuronal migration from the subventricular zone during development. A dominant effect was observed. Further studies showed that the mutant protein had constitutively increased phosphotransferase activity with increased autophosphorylation at Thr287 compared to controls, consistent with a gain of function. The R292P mutant protein showed impaired nuclear localization, although calmodulin binding was intact. Silencing the catalytic site of the mutant protein reversed the pathogenic effect on neuronal maturation, without rescuing its nuclear targeting. The authors concluded that CAMK2G has an indispensable function in neurodevelopment and that the R292P protein gains constitutive activity toward cytosolic targets, rather than impaired targeting to the nucleus.


REFERENCES

  1. de Ligt, J., Willemsen, M. H., van Bon, B. W. M., Kleefstra, T., Yntema, H. G., Kroes, T., Vulto-van Silfhout, A. T., Koolen, D. A., de Vries, P., Gilissen, C., del Rosario, M., Hoischen, A., Scheffer, H., de Vries, B. B. A., Brunner, H. G., Veltman, J. A., Vissers, L. E. L. M. Diagnostic exome sequencing in persons with severe intellectual disability. New Eng. J. Med. 367: 1921-1929, 2012. [PubMed: 23033978, related citations] [Full Text]

  2. Proietti Onori, M., Koopal, B., Everman, D. B., Worthington, J. D., Jones, J. R., Ploeg, M. A., Mientjes, E., van Bon, B. W., Kleefstra, T., Schulman, H., Kushner, S. A., Kury, S., Elgersma, Y., van Woerden, G. M. The intellectual disability-associated CAMK2G p.rg292Pro mutation acts as a pathogenic gain-of-function. Hum. Mutat. 39: 2008-2024, 2018. [PubMed: 30184290, related citations] [Full Text]


Creation Date:
Cassandra L. Kniffin : 07/28/2019
carol : 12/11/2020
carol : 01/22/2020
carol : 08/01/2019
carol : 07/30/2019
ckniffin : 07/29/2019

# 618522

INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL DOMINANT 59; MRD59


Alternative titles; symbols

MENTAL RETARDATION, AUTOSOMAL DOMINANT 59


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
10q22.2 Intellectual developmental disorder, autosomal dominant 59 618522 Autosomal dominant 3 CAMK2G 602123

TEXT

A number sign (#) is used with this entry because of evidence that autosomal dominant intellectual developmental disorder-59 (MRD59) is caused by heterozygous mutation in the CAMK2G gene (602123) on chromosome 10q22.


Clinical Features

De Ligt et al. (2012) reported a boy with severe intellectual disability with myopia, strabismus, short stature, flat face with narrow forehead, long palpebral fissures, arched eyebrows, sacral dimple, short hands, brachydactyly, and short feet. He walked at age 5 years and started to speak at age 4 years. He also had behavioral abnormalities, including self-mutilation. Laboratory studies suggested mitochondrial dysfunction without mitochondrial gene defects. Proietti Onori et al. (2018) provided follow-up of the patient reported by de Ligt et al. (2012). At age 16.5 years, he had severely impaired intellectual development (IQ less than 35) and very poor speech. He did not have seizures; juvenile-onset glaucoma was noted. Brain imaging showed no structural abnormalities.

Proietti Onori et al. (2018) reported a 5-year-old boy who presented in infancy with generalized hypotonia and developmental delay with impaired speech and language, as well as autism. He had mild dysmorphic features, including relative macrocephaly, prominent capillary vascular malformations on the forehead and glabella, tall forehead, tubular nose with upturned tip, large ears, round cheeks, and facial hypotonia. He did not have seizures, and brain imaging was normal. The authors noted that both this patient and the patient previously reported by de Ligt et al. (2012) had some facial dysmorphisms, though not strikingly similar.


Inheritance

The heterozygous mutations in the CAMK2G gene that were identified in patients with MRD59 by de Ligt et al. (2012) and Proietti Onori et al. (2018) occurred de novo.


Molecular Genetics

In a boy with MRD59, de Ligt et al. (2012) identified a de novo heterozygous missense mutation in the CAMK2G gene (R292P; 602123.0001). The patient was ascertained from a larger cohort of 100 patients with severe intellectual disability who underwent exome sequencing. Functional studies of the variant were not performed. The patient had normal array and MLL2 testing.

Proietti Onori et al. (2018) identified a de novo heterozygous R292P mutation in a 5-year-old boy with MRD59 and noted that the substitution occurs in an autoregulatory domain that maintains the kinase in an inactive state in the absence of calcium/calmodulin. Detailed in vitro and in vivo functional studies in mouse primary hippocampal cells and in mouse embryos showed that the mutant protein caused decreased neurite length and arborization, as well as impaired neuronal migration from the subventricular zone during development. A dominant effect was observed. Further studies showed that the mutant protein had constitutively increased phosphotransferase activity with increased autophosphorylation at Thr287 compared to controls, consistent with a gain of function. The R292P mutant protein showed impaired nuclear localization, although calmodulin binding was intact. Silencing the catalytic site of the mutant protein reversed the pathogenic effect on neuronal maturation, without rescuing its nuclear targeting. The authors concluded that CAMK2G has an indispensable function in neurodevelopment and that the R292P protein gains constitutive activity toward cytosolic targets, rather than impaired targeting to the nucleus.


REFERENCES

  1. de Ligt, J., Willemsen, M. H., van Bon, B. W. M., Kleefstra, T., Yntema, H. G., Kroes, T., Vulto-van Silfhout, A. T., Koolen, D. A., de Vries, P., Gilissen, C., del Rosario, M., Hoischen, A., Scheffer, H., de Vries, B. B. A., Brunner, H. G., Veltman, J. A., Vissers, L. E. L. M. Diagnostic exome sequencing in persons with severe intellectual disability. New Eng. J. Med. 367: 1921-1929, 2012. [PubMed: 23033978] [Full Text: https://doi.org/10.1056/NEJMoa1206524]

  2. Proietti Onori, M., Koopal, B., Everman, D. B., Worthington, J. D., Jones, J. R., Ploeg, M. A., Mientjes, E., van Bon, B. W., Kleefstra, T., Schulman, H., Kushner, S. A., Kury, S., Elgersma, Y., van Woerden, G. M. The intellectual disability-associated CAMK2G p.rg292Pro mutation acts as a pathogenic gain-of-function. Hum. Mutat. 39: 2008-2024, 2018. [PubMed: 30184290] [Full Text: https://doi.org/10.1002/humu.23647]


Creation Date:
Cassandra L. Kniffin : 07/28/2019

Edit History:
carol : 12/11/2020
carol : 01/22/2020
carol : 08/01/2019
carol : 07/30/2019
ckniffin : 07/29/2019