Entry - #619291 - DYSTONIA 30; DYT30 - OMIM
# 619291

DYSTONIA 30; DYT30


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
20p13 Dystonia 30 619291 AD 3 VPS16 608550
Clinical Synopsis
 
Phenotypic Series
 

INHERITANCE
- Autosomal dominant
HEAD & NECK
Mouth
- Oromandibular dystonia
Neck
- Torticollis
NEUROLOGIC
Central Nervous System
- Dystonia
- Oromandibular dystonia
- Dysarthria
- Bulbar dystonia
- Upper limb dystonia
- Writer's cramp
- Dysphonia
- Speech difficulties
- Myoclonic jerks (in some patients)
- Generalized dystonia
- Impaired gait
- Loss of ambulation (in some patients)
- Intellectual disability, mild to moderate (in some patients)
- Cerebral atrophy on brain imaging
- Small caudate and putamen
- Signal abnormalities in the basal ganglia
- Brain imaging may be normal
Behavioral Psychiatric Manifestations
- Psychiatric manifestations (in some patients)
- Mood disorders
- Impulsivity
- Aggression
- OCD
- PTSD
- Bipolar disorder
MISCELLANEOUS
- Median age at onset 12 years (range 3 to 50)
- Slowly progressive
- Intrafamilial variability
- Incomplete penetrance
MOLECULAR BASIS
- Caused by mutation in the VPS16 core subunit of corvet and HOPS complexes gene (VPS16, 608550.0001)
Dystonia - PS128100 - 37 Entries
Location Phenotype Inheritance Phenotype
mapping key
Phenotype
MIM number
Gene/Locus Gene/Locus
MIM number
1p36.32-p36.13 Dystonia 13, torsion AD 2 607671 DYT13 607671
1p35.3 Dystonia, childhood-onset, with optic atrophy and basal ganglia abnormalities AR 3 617282 MECR 608205
1p35.1 Dystonia 2, torsion, autosomal recessive AR 3 224500 HPCA 142622
1p34.2 GLUT1 deficiency syndrome 2, childhood onset AD 3 612126 SLC2A1 138140
1p34.2 Dystonia 9 AD 3 601042 SLC2A1 138140
2p22.2 Dystonia 33 AD, AR 3 619687 EIF2AK2 176871
2q14.3-q21.3 Dystonia 21 AD 2 614588 DYT21 614588
2q31 Paroxysmal nonkinesigenic dyskinesia 2 AD 2 611147 PNKD2 611147
2q31.2 Dystonia 16 AR 3 612067 PRKRA 603424
2q35 Paroxysmal nonkinesigenic dyskinesia 1 AD 3 118800 PNKD 609023
2q37.3 Dystonia 27 AR 3 616411 COL6A3 120250
3p13 ?Dystonia 35, childhood-onset AR 3 619921 SHQ1 613663
4q21.1 Dystonia 37, early-onset, with striatal lesions AR 3 620427 NUP54 607607
5q22.3 ?Dystonia 34, myoclonic AD 3 619724 KCNN2 605879
7q21.3 Dystonia-11, myoclonic AD 3 159900 SGCE 604149
8p11.21 Dystonia 6, torsion AD 3 602629 THAP1 609520
9q22.32 Dystonia 31 AR 3 619565 AOPEP 619600
9q34 Dystonia 23 AD 2 614860 DYT23 614860
9q34.11 Dystonia-1, torsion AD 3 128100 TOR1A 605204
11p14.3-p14.2 Dystonia 24 AD 3 615034 ANO3 610110
11q13.2 Episodic kinesigenic dyskinesia 3 AD 3 620245 TMEM151A 620108
11q23.3 ?Dystonia 32 AR 3 619637 VPS11 608549
14q22.2 Dystonia, DOPA-responsive AD, AR 3 128230 GCH1 600225
16p11.2 Episodic kinesigenic dyskinesia 1 AD 3 128200 PRRT2 614386
16q13-q22.1 Episodic kinesigenic dyskinesia 2 AD 2 611031 EKD2 611031
17q22 ?Dystonia 22, adult-onset AR 3 620456 TSPOAP1 610764
17q22 Dystonia 22, juvenile-onset AR 3 620453 TSPOAP1 610764
18p11 Dystonia-15, myoclonic AD 2 607488 DYT15 607488
18p Dystonia-7, torsion AD 2 602124 DYT7 602124
18p11.21 Dystonia 25 AD 3 615073 GNAL 139312
19p13.3 Dystonia 4, torsion, autosomal dominant AD 3 128101 TUBB4A 602662
19q13.12 Dystonia 28, childhood-onset AD 3 617284 KMT2B 606834
19q13.2 Dystonia-12 AD 3 128235 ATP1A3 182350
20p13 Dystonia 30 AD 3 619291 VPS16 608550
20p11.2-q13.12 Dystonia-17, primary torsion AR 2 612406 DYT17 612406
22q12.3 Dystonia 26, myoclonic AD 3 616398 KCTD17 616386
Xq13.1 Dystonia-Parkinsonism, X-linked XLR 3 314250 TAF1 313650

TEXT

A number sign (#) is used with this entry because of evidence that dystonia-30 (DYT30) is caused by heterozygous mutation in the VPS16 gene (608550) on chromosome 20p13. One family with a homozygous mutation in the VPS16 gene has been reported (Cai et al., 2016).


Description

Dystonia-30 (DYT30) is an autosomal dominant neurologic disorder characterized by the onset of symptoms in the first decades of life. Patients present with oromandibular, cervical, bulbar, or upper limb dystonia, and usually show slow progression to generalized dystonia. Some patients may lose ambulation. A subset of patients may also have neurocognitive impairment, including mild intellectual disability or psychiatric manifestations (summary by Steel et al., 2020).

In a review of the pathogenesis of disorders with prominent dystonia, Monfrini et al. (2021) classified DYT30 as belonging to a group of neurologic disorders termed 'HOPS-associated neurologic disorders' (HOPSANDs), which are caused by mutations in genes encoding various components of the autophagic/endolysosomal system, including VPS16.


Clinical Features

Steel et al. (2020) reported 19 patients from 14 unrelated families of European descent with DYT30. The patients were ascertained through international collaboration and the GeneMatcher program. The patients, who ranged from 17 to 69 years of age, presented with progressive early-onset dystonia at a median age of 12 years (range 3 to 50). Initial features included oromandibular, bulbar, cervical, and upper limb involvement, including speech difficulties, dysphonia, and writer's cramp. Most patients developed generalized dystonia, although only a minority (16%) lost independent ambulation. About one-third of patients had mild to moderate intellectual disability and/or psychiatric manifestations, including mood disorders, impulsivity, OCD, and PTSD. Brain imaging, performed in 4 patients, showed generalized cerebral atrophy, small caudate and putamen, and T2-weighted signal abnormalities in the basal ganglia and midbrain. There was also some evidence of iron deposition.

Pott et al. (2021) reported a 42-year-old German man with DYT30. He developed right-sided writer's cramp at age 16 years, which progressed to involve the tongue, pharynx, neck, and trunk, accompanied by myoclonic jerks. He responded well to deep brain stimulation. The legs were not affected. He had no cognitive involvement, and brain imaging was unremarkable except for mild nonspecific gliosis.

Li et al. (2021) reported a 28-year-old Chinese woman with early-onset multifocal dystonia. She developed torticollis at age 11, but had a history of leg shaking at age 8. The dystonia was progressive, and she had orofacial dyskinesia, bulbar dystonia, and leg dystonia. Dysphonia and swallowing difficulties were present. The trunk was not affected, and she did not have neuropsychiatric symptoms.

Autosomal Recessive Inheritance

Cai et al. (2016) reported a large multigenerational Chinese family in which 5 individuals had onset of torticollis between 11 and 14 years of age. The dystonia became generalized in 4 patients and remained focal in 1. The 4 patients with generalized dystonia had involvement of the oropharyngeal area, limbs, and trunk. Brain imaging of 1 patient was normal.


Clinical Management

Steel et al. (2020) and Pott et al. (2021) reported good response to deep brain stimulation in some patients with DYT30.


Inheritance

The transmission pattern of DYT30 in the families reported by Steel et al. (2020) was consistent with autosomal dominant inheritance and incomplete penetrance.


Molecular Genetics

In 19 patients from 14 unrelated families with DYT30, Steel et al. (2020) identified heterozygous loss-of-function mutations in the VPS16 gene (see, e.g., 608550.0001-608550.0004). The mutations, which were found by exome sequencing, were absent from the gnomAD database, except for 1 (R635X), which was found once (1 of 248,918 alleles). There were 4 frameshift, 3 nonsense, and 3 splice site mutations; 1 patient had a de novo microdeletion encompassing the VPS16 gene. Four mutations were inherited from a symptomatic parent, and 4 were inherited from an asymptomatic parent, consistent with incomplete penetrance. The inheritance pattern in the remaining patients was unknown. Functional studies of the variants were not performed, but all were predicted to result in haploinsufficiency. Electron microscopic studies of fibroblasts derived from 2 unrelated patients showed increased clusters of vacuoles, some containing particulate or laminated inclusions, suggesting lysosomal dysfunction.

In a 42-year-old German man with DYT30, Pott et al. (2021) identified a heterozygous frameshift mutation in the VPS16 gene (608550.0005). The mutation was found by direct Sanger sequencing; functional studies of the variant were not performed.

In a 28-year-old Chinese woman with DYT30, Li et al. (2021) identified a heterozygous frameshift mutation in the VPS16 gene (Arg643fsTer). The variant, which was found by whole-exome sequencing and confirmed by Sanger sequencing, was inherited from her unaffected father, indicating incomplete penetrance. Functional studies of the variant and studies of patient cells were not performed.

Autosomal Recessive Dystonia 30

In 5 members of a multigenerational consanguineous Chinese family with autosomal recessive inheritance of DYT30, Cai et al. (2016) identified a homozygous missense mutation in the VPS16 gene (N52K; 608550.0006). The mutation, which was found by a combination of homozygosity mapping and whole-exome sequencing and confirmed by Sanger sequencing, segregated with the disorder in the family. Studies of patient cells were not performed, but generation of mice carrying the N52K mutation using CRISPR-Cas9 technology showed that the mutation caused progressively impaired motor function compared to controls. There was also a decrease in mutant VPS16 protein levels in blood from mutant mice.


REFERENCES

  1. Cai, X., Chen, X., Wu, S., Liu, W., Zhang, X., Zhang, D., He, S., Wang, B., Zhang, M., Zhang, Y., Li, Z., Luo, K., Cai, Z., Li, W. Homozygous mutation of VPS16 gene is responsible for an autosomal recessive adolescent-onset primary dystonia. Sci. Rep. 6: 25834, 2016. [PubMed: 27174565, images, related citations] [Full Text]

  2. Li, L.-X., Jiang, L.-T., Liu, Y., Zhang, X.-L., Pan, Y.-G., Pan, L.-Z., Nie, Z.-Y., Wan, X.-H., Jin, L.-J. Mutation screening of VPS16 gene in patients with isolated dystonia. Parkinsonism Relat. Dis. 83: 63-65, 2021.

  3. Monfrini, E., Zech, M., Steel, D., Kurian, M. A., Winkelmann, J., Di Fonzo, A. HOPS-associated neurological disorders (HOPSANDs): linking endolysosomal dysfunction to the pathogenesis of dystonia. Brain 144: 2610-2615, 2021. [PubMed: 33871597, related citations] [Full Text]

  4. Pott, H., Bruggemann, N., Reese, R., Zeuner, K. E., Gandor, F., Gruber, D., DysTract Study Group, Klein, C., Volkmann, J., Lohmann, K. Truncating VPS16 mutations are rare in early onset dystonia. Ann. Neurol. 89: 625-626, 2021. [PubMed: 33305852, related citations] [Full Text]

  5. Steel, D., Zech, M., Zhao, C., Barwick, K. E. S., Burke, D., Demailly, D., Kumar, K. R., Zorzi, G., Nardocci, N., Kaiyrzhanov, R., Wagner, M., Iuso, A., and 41 others. Loss-of-function variants in HOPS complex genes VPS16 and VPS41 cause early onset dystonia associated with lysosomal abnormalities. Ann. Neurol. 88: 867-877, 2020. [PubMed: 32808683, related citations] [Full Text]


Contributors:
Cassandra L. Kniffin - updated : 11/29/2021
Creation Date:
Cassandra L. Kniffin : 04/22/2021
alopez : 11/30/2021
alopez : 11/30/2021
ckniffin : 11/29/2021
alopez : 04/30/2021
alopez : 04/30/2021
ckniffin : 04/23/2021

# 619291

DYSTONIA 30; DYT30


DO: 0060937;  


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
20p13 Dystonia 30 619291 Autosomal dominant 3 VPS16 608550

TEXT

A number sign (#) is used with this entry because of evidence that dystonia-30 (DYT30) is caused by heterozygous mutation in the VPS16 gene (608550) on chromosome 20p13. One family with a homozygous mutation in the VPS16 gene has been reported (Cai et al., 2016).


Description

Dystonia-30 (DYT30) is an autosomal dominant neurologic disorder characterized by the onset of symptoms in the first decades of life. Patients present with oromandibular, cervical, bulbar, or upper limb dystonia, and usually show slow progression to generalized dystonia. Some patients may lose ambulation. A subset of patients may also have neurocognitive impairment, including mild intellectual disability or psychiatric manifestations (summary by Steel et al., 2020).

In a review of the pathogenesis of disorders with prominent dystonia, Monfrini et al. (2021) classified DYT30 as belonging to a group of neurologic disorders termed 'HOPS-associated neurologic disorders' (HOPSANDs), which are caused by mutations in genes encoding various components of the autophagic/endolysosomal system, including VPS16.


Clinical Features

Steel et al. (2020) reported 19 patients from 14 unrelated families of European descent with DYT30. The patients were ascertained through international collaboration and the GeneMatcher program. The patients, who ranged from 17 to 69 years of age, presented with progressive early-onset dystonia at a median age of 12 years (range 3 to 50). Initial features included oromandibular, bulbar, cervical, and upper limb involvement, including speech difficulties, dysphonia, and writer's cramp. Most patients developed generalized dystonia, although only a minority (16%) lost independent ambulation. About one-third of patients had mild to moderate intellectual disability and/or psychiatric manifestations, including mood disorders, impulsivity, OCD, and PTSD. Brain imaging, performed in 4 patients, showed generalized cerebral atrophy, small caudate and putamen, and T2-weighted signal abnormalities in the basal ganglia and midbrain. There was also some evidence of iron deposition.

Pott et al. (2021) reported a 42-year-old German man with DYT30. He developed right-sided writer's cramp at age 16 years, which progressed to involve the tongue, pharynx, neck, and trunk, accompanied by myoclonic jerks. He responded well to deep brain stimulation. The legs were not affected. He had no cognitive involvement, and brain imaging was unremarkable except for mild nonspecific gliosis.

Li et al. (2021) reported a 28-year-old Chinese woman with early-onset multifocal dystonia. She developed torticollis at age 11, but had a history of leg shaking at age 8. The dystonia was progressive, and she had orofacial dyskinesia, bulbar dystonia, and leg dystonia. Dysphonia and swallowing difficulties were present. The trunk was not affected, and she did not have neuropsychiatric symptoms.

Autosomal Recessive Inheritance

Cai et al. (2016) reported a large multigenerational Chinese family in which 5 individuals had onset of torticollis between 11 and 14 years of age. The dystonia became generalized in 4 patients and remained focal in 1. The 4 patients with generalized dystonia had involvement of the oropharyngeal area, limbs, and trunk. Brain imaging of 1 patient was normal.


Clinical Management

Steel et al. (2020) and Pott et al. (2021) reported good response to deep brain stimulation in some patients with DYT30.


Inheritance

The transmission pattern of DYT30 in the families reported by Steel et al. (2020) was consistent with autosomal dominant inheritance and incomplete penetrance.


Molecular Genetics

In 19 patients from 14 unrelated families with DYT30, Steel et al. (2020) identified heterozygous loss-of-function mutations in the VPS16 gene (see, e.g., 608550.0001-608550.0004). The mutations, which were found by exome sequencing, were absent from the gnomAD database, except for 1 (R635X), which was found once (1 of 248,918 alleles). There were 4 frameshift, 3 nonsense, and 3 splice site mutations; 1 patient had a de novo microdeletion encompassing the VPS16 gene. Four mutations were inherited from a symptomatic parent, and 4 were inherited from an asymptomatic parent, consistent with incomplete penetrance. The inheritance pattern in the remaining patients was unknown. Functional studies of the variants were not performed, but all were predicted to result in haploinsufficiency. Electron microscopic studies of fibroblasts derived from 2 unrelated patients showed increased clusters of vacuoles, some containing particulate or laminated inclusions, suggesting lysosomal dysfunction.

In a 42-year-old German man with DYT30, Pott et al. (2021) identified a heterozygous frameshift mutation in the VPS16 gene (608550.0005). The mutation was found by direct Sanger sequencing; functional studies of the variant were not performed.

In a 28-year-old Chinese woman with DYT30, Li et al. (2021) identified a heterozygous frameshift mutation in the VPS16 gene (Arg643fsTer). The variant, which was found by whole-exome sequencing and confirmed by Sanger sequencing, was inherited from her unaffected father, indicating incomplete penetrance. Functional studies of the variant and studies of patient cells were not performed.

Autosomal Recessive Dystonia 30

In 5 members of a multigenerational consanguineous Chinese family with autosomal recessive inheritance of DYT30, Cai et al. (2016) identified a homozygous missense mutation in the VPS16 gene (N52K; 608550.0006). The mutation, which was found by a combination of homozygosity mapping and whole-exome sequencing and confirmed by Sanger sequencing, segregated with the disorder in the family. Studies of patient cells were not performed, but generation of mice carrying the N52K mutation using CRISPR-Cas9 technology showed that the mutation caused progressively impaired motor function compared to controls. There was also a decrease in mutant VPS16 protein levels in blood from mutant mice.


REFERENCES

  1. Cai, X., Chen, X., Wu, S., Liu, W., Zhang, X., Zhang, D., He, S., Wang, B., Zhang, M., Zhang, Y., Li, Z., Luo, K., Cai, Z., Li, W. Homozygous mutation of VPS16 gene is responsible for an autosomal recessive adolescent-onset primary dystonia. Sci. Rep. 6: 25834, 2016. [PubMed: 27174565] [Full Text: https://doi.org/10.1038/srep25834]

  2. Li, L.-X., Jiang, L.-T., Liu, Y., Zhang, X.-L., Pan, Y.-G., Pan, L.-Z., Nie, Z.-Y., Wan, X.-H., Jin, L.-J. Mutation screening of VPS16 gene in patients with isolated dystonia. Parkinsonism Relat. Dis. 83: 63-65, 2021.

  3. Monfrini, E., Zech, M., Steel, D., Kurian, M. A., Winkelmann, J., Di Fonzo, A. HOPS-associated neurological disorders (HOPSANDs): linking endolysosomal dysfunction to the pathogenesis of dystonia. Brain 144: 2610-2615, 2021. [PubMed: 33871597] [Full Text: https://doi.org/10.1093/brain/awab161]

  4. Pott, H., Bruggemann, N., Reese, R., Zeuner, K. E., Gandor, F., Gruber, D., DysTract Study Group, Klein, C., Volkmann, J., Lohmann, K. Truncating VPS16 mutations are rare in early onset dystonia. Ann. Neurol. 89: 625-626, 2021. [PubMed: 33305852] [Full Text: https://doi.org/10.1002/ana.25990]

  5. Steel, D., Zech, M., Zhao, C., Barwick, K. E. S., Burke, D., Demailly, D., Kumar, K. R., Zorzi, G., Nardocci, N., Kaiyrzhanov, R., Wagner, M., Iuso, A., and 41 others. Loss-of-function variants in HOPS complex genes VPS16 and VPS41 cause early onset dystonia associated with lysosomal abnormalities. Ann. Neurol. 88: 867-877, 2020. [PubMed: 32808683] [Full Text: https://doi.org/10.1002/ana.25879]


Contributors:
Cassandra L. Kniffin - updated : 11/29/2021

Creation Date:
Cassandra L. Kniffin : 04/22/2021

Edit History:
alopez : 11/30/2021
alopez : 11/30/2021
ckniffin : 11/29/2021
alopez : 04/30/2021
alopez : 04/30/2021
ckniffin : 04/23/2021