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Items: 1 to 20 of 30

1.
Efficient Embryonic Homozygous Gene Conversion via RAD51-Enhanced Interhomolog Repair
Jonathan J. Wilde, Tomomi Aida, Ricardo C.H. del Rosario, Tobias Kaiser, Peimin Qi, Martin Wienisch, Qiangge Zhang, Steven Colvin, Guoping Feng
Cell. Author manuscript; available in PMC 2022 Jun 10.
Published in final edited form as: Cell. 2021 Jun 10; 184(12): 3267–3280.e18. Published online 2021 May 26. doi: 10.1016/j.cell.2021.04.035
PMCID:
PMC8240950
ArticlePDF–2.2M
2.
Local regulation of gene expression by lncRNA promoters, transcription, and splicing
Jesse M. Engreitz, Jenna E. Haines, Elizabeth M. Perez, Glen Munson, Jenny Chen, Michael Kane, Patrick E. McDonel, Mitchell Guttman, Eric S. Lander
Nature. Author manuscript; available in PMC 2019 Nov 13.
Published in final edited form as: Nature. 2016 Nov 17; 539(7629): 452–455. Published online 2016 Oct 26. doi: 10.1038/nature20149
PMCID:
PMC6853796
ArticlePDF–3.4M
3.
Regulation of CHD2 expression by the Chaserr long noncoding RNA gene is essential for viability
Aviv Rom, Liliya Melamed, Noa Gil, Micah Jonathan Goldrich, Rotem Kadir, Matan Golan, Inbal Biton, Rotem Ben-Tov Perry, Igor Ulitsky
Nat Commun. 2019; 10: 5092. Published online 2019 Nov 8. doi: 10.1038/s41467-019-13075-8
PMCID:
PMC6841665
ArticlePDF–2.0M
4.
Effect of expression alteration in flanking genes on phenotypes of St8sia2-deficient mice
Keisuke Ikegami, Kazumasa Saigoh, Atsuko Fujioka, Mamoru Nagano, Ken Kitajima, Chihiro Sato, Satoru Masubuchi, Susumu Kusunoki, Yasufumi Shigeyoshi
Sci Rep. 2019; 9: 13634. Published online 2019 Sep 20. doi: 10.1038/s41598-019-50006-5
PMCID:
PMC6754417
ArticlePDF–4.4M
5.
Chd2 is necessary for neural circuit development and long-term memory
Young J Kim, Sattar Khoshkhoo, Jan C Frankowski, Bingyao Zhu, Saad Abbasi, Sunyoung Lee, Ye Emily Wu, Robert F Hunt
Neuron. Author manuscript; available in PMC 2019 Dec 5.
Published in final edited form as: Neuron. 2018 Dec 5; 100(5): 1180–1193.e6. Published online 2018 Oct 18. doi: 10.1016/j.neuron.2018.09.049
PMCID:
PMC6479120
ArticlePDF–1.6M
6.
Irisin Mediates Effects on Bone and Fat via αV Integrin Receptors
Hyeonwoo Kim, Christiane D. Wrann, Mark Jedrychowski, Sara Vidoni, Yukiko Kitase, Kenichi Nagano, Chenhe Zhou, Joshua Chou, Virginia-Jeni A. Parkman, Scott J. Novick, Timothy S. Strutzenberg, Bruce D. Pascal, Phuong T. Le, Daniel J. Brooks, Alexander M. Roche, Kaitlyn K. Gerber, Laura Mattheis, Wenjing Chen, Hua Tu, Mary L. Bouxsein, Patrick R. Griffin, Roland Baron, Clifford J. Rosen, Lynda F. Bonewald, Bruce M. Spiegelman
Cell. Author manuscript; available in PMC 2019 Dec 13.
Published in final edited form as: Cell. 2018 Dec 13; 175(7): 1756–1768.e17. doi: 10.1016/j.cell.2018.10.025
Correction in:
Cell. 2019 Jul 11; 178(2): 507–508.
PMCID:
PMC6298040
ArticlePDF–1.2M
7.
Autism‐linked CHD gene expression patterns during development predict multi‐organ disease phenotypes
Sahrunizam Kasah, Christopher Oddy, M. Albert Basson
J Anat. 2018 Dec; 233(6): 755–769. Published online 2018 Oct 2. doi: 10.1111/joa.12889
PMCID:
PMC6231164
ArticlePDF–7.9M
8.
Autism-like phenotype and risk gene-RNA deadenylation by CPEB4 mis-splicing
Alberto Parras, Héctor Anta, María Santos-Galindo, Vivek Swarup, Ainara Elorza, José L. Nieto-Gonzalez, Sara Picó, Ivó H. Hernández, Juan I. Díaz-Hernández, Eulàlia Belloc, Annie Rodolosse, Neelroop N. Parikshak, Olga Peñagarikano, Rafael Fernández-Chacón, Manuel Irimia, Pilar Navarro, Daniel H. Geschwind, Raúl Méndez, José J. Lucas
Nature. Author manuscript; available in PMC 2019 Feb 15.
Published in final edited form as: Nature. 2018 Aug; 560(7719): 441–446. Published online 2018 Aug 15. doi: 10.1038/s41586-018-0423-5
PMCID:
PMC6217926
ArticlePDF–5.9M
9.
A CRISPR-based screen for Hedgehog signaling provides insights into ciliary function and ciliopathies
David K. Breslow, Sascha Hoogendoorn, Adam R. Kopp, David W. Morgens, Brandon K. Vu, Margaret C. Kennedy, Kyuho Han, Amy Li, Gaelen T. Hess, Michael C. Bassik, James K. Chen, Maxence V. Nachury
Nat Genet. Author manuscript; available in PMC 2018 Aug 19.
Published in final edited form as: Nat Genet. 2018 Mar; 50(3): 460–471. Published online 2018 Feb 19. doi: 10.1038/s41588-018-0054-7
PMCID:
PMC5862771
ArticlePDF–2.5M
10.
Chd2 regulates chromatin for proper gene expression toward differentiation in mouse embryonic stem cells
Yuichiro Semba, Akihito Harada, Kazumitsu Maehara, Shinya Oki, Chikara Meno, Jun Ueda, Kazuo Yamagata, Atsushi Suzuki, Mitsuho Onimaru, Jumpei Nogami, Seiji Okada, Koichi Akashi, Yasuyuki Ohkawa
Nucleic Acids Res. 2017 Sep 6; 45(15): 8758–8772. Published online 2017 May 26. doi: 10.1093/nar/gkx475
PMCID:
PMC5587750
ArticlePDF–1.7M
11.
High-throughput discovery of novel developmental phenotypes
Mary E. Dickinson, Ann M. Flenniken, Xiao Ji, Lydia Teboul, Michael D. Wong, Jacqueline K. White, Terrence F. Meehan, Wolfgang J. Weninger, Henrik Westerberg, Hibret Adissu, Candice N. Baker, Lynette Bower, James M. Brown, L. Brianna Caddle, Francesco Chiani, Dave Clary, James Cleak, Mark J. Daly, James M. Denegre, Brendan Doe, Mary E. Dolan, Sarah M. Edie, Helmut Fuchs, Valerie Gailus-Durner, Antonella Galli, Alessia Gambadoro, Juan Gallegos, Shiying Guo, Neil R. Horner, Chih-wei Hsu, Sara J. Johnson, Sowmya Kalaga, Lance C. Keith, Louise Lanoue, Thomas N. Lawson, Monkol Lek, Manuel Mark, Susan Marschall, Jeremy Mason, Melissa L. McElwee, Susan Newbigging, Lauryl M.J. Nutter, Kevin A. Peterson, Ramiro Ramirez-Solis, Douglas J. Rowland, Edward Ryder, Kaitlin E. Samocha, John R. Seavitt, Mohammed Selloum, Zsombor Szoke-Kovacs, Masaru Tamura, Amanda G Trainor, Ilinca Tudose, Shigeharu Wakana, Jonathan Warren, Olivia Wendling, David B. West, Leeyean Wong, Atsushi Yoshiki, The International Mouse Phenotyping Consortium, Daniel G. MacArthur, Glauco P. Tocchini-Valentini, Xiang Gao, Paul Flicek, Allan Bradley, William C. Skarnes, Monica J. Justice, Helen E. Parkinson, Mark Moore, Sara Wells, Robert E. Braun, Karen L. Svenson, Martin Hrabe de Angelis, Yann Herault, Tim Mohun, Ann-Marie Mallon, R. Mark Henkelman, Steve D.M. Brown, David J. Adams, K.C. Kent Lloyd, Colin McKerlie, Arthur L. Beaudet, Maja Bucan, Stephen A. Murray
Nature. Author manuscript; available in PMC 2017 Mar 14.
Published in final edited form as: Nature. 2016 Sep 22; 537(7621): 508–514. Published online 2016 Sep 14. doi: 10.1038/nature19356
Correction in:
Nature. 2017 Nov 16; 551(7680): 398.
PMCID:
PMC5295821
ArticlePDF–3.0M
12.
Collaborative cross mice in a genetic association study reveal new candidate genes for bone microarchitecture
Roei Levy, Richard F. Mott, Fuad A. Iraqi, Yankel Gabet
BMC Genomics. 2015; 16: 1013. Published online 2015 Nov 26. doi: 10.1186/s12864-015-2213-x
PMCID:
PMC4661944
ArticlePDF–1.6M
13.
Genome-Wide Mapping and Interrogation of the Nmp4 Antianabolic Bone Axis
Paul Childress, Keith R. Stayrook, Marta B. Alvarez, Zhiping Wang, Yu Shao, Selene Hernandez-Buquer, Justin K. Mack, Zachary R. Grese, Yongzheng He, Daniel Horan, Fredrick M. Pavalko, Stuart J. Warden, Alexander G. Robling, Feng-Chun Yang, Matthew R. Allen, Venkatesh Krishnan, Yunlong Liu, Joseph P. Bidwell
Mol Endocrinol. 2015 Sep; 29(9): 1269–1285. Published online 2015 Aug 5. doi: 10.1210/me.2014-1406
PMCID:
PMC4552437
Article
14.
Catalog of mRNA expression patterns for DNA methylating and demethylating genes in developing mouse lower urinary tract
Kimberly P. Keil, Helene M. Altmann, Vatsal Mehta, Lisa L. Abler, Erik A. Elton, Chad M. Vezina
Gene Expr Patterns. Author manuscript; available in PMC 2014 Dec 1.
Published in final edited form as: Gene Expr Patterns. 2013 Dec; 13(8): 10.1016/j.gep.2013.07.008. Published online 2013 Aug 3. doi: 10.1016/j.gep.2013.07.008
PMCID:
PMC3825751
ArticlePDF–7.2M
15.
Chd2 interacts with H3.3 to determine myogenic cell fate
Akihito Harada, Seiji Okada, Daijiro Konno, Jun Odawara, Tomohiko Yoshimi, Saori Yoshimura, Hiromi Kumamaru, Hirokazu Saiwai, Toshiaki Tsubota, Hitoshi Kurumizaka, Koichi Akashi, Taro Tachibana, Anthony N Imbalzano, Yasuyuki Ohkawa
EMBO J. 2012 Jun 29; 31(13): 2994–3007. Published online 2012 May 8. doi: 10.1038/emboj.2012.136
PMCID:
PMC3395093
ArticlePDF–1.0M
16.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
ArticlePDF–1.0M
17.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
ArticlePDF–3.8M
18.
Disruption of Chromodomain Helicase DNA Binding Protein 2 (CHD2) Causes Scoliosis
Shashikant Kulkarni, Prabakaran Nagarajan, Jonathan Wall, Diana J. Donovan, Robert L. Donell, Azra H. Ligon, Sundaresan Venkatachalam, Bradley J. Quade
Am J Med Genet A. Author manuscript; available in PMC 2010 Mar 8.
Published in final edited form as: Am J Med Genet A. 2008 May 1; 146A(9): 1117–1127. doi: 10.1002/ajmg.a.32178
PMCID:
PMC2834558
ArticlePDF–2.1M
19.
A Mutation in the Mouse Chd2 Chromatin Remodeling Enzyme Results in a Complex Renal Phenotype
Concetta G.A. Marfella, Nils Henninger, Scott E. LeBlanc, Namrata Krishnan, David S. Garlick, Lawrence B. Holzman, Anthony N. Imbalzano
Kidney Blood Press Res. 2009 Feb; 31(6): 421–432. Published online 2009 Jan 14. doi: 10.1159/000190788
PMCID:
PMC2818461
ArticlePDF–1.2M
20.
Role of Chromodomain Helicase DNA binding protein 2 in DNA damage response signaling and tumorigenesis
Prabakaran Nagarajan, Thandi M. Onami, Sangeetha Rajagopalan, Stephen Kania, Robert Donnell, Sundaresan Venkatachalam
Oncogene. Author manuscript; available in PMC 2009 Aug 26.
Published in final edited form as: Oncogene. 2009 Feb 26; 28(8): 1053–1062. Published online 2009 Jan 12. doi: 10.1038/onc.2008.440
PMCID:
PMC2648865
ArticlePDF–1.0M

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