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Items: 1 to 20 of 33

1.
Gallionellaceae in rice root plaque: metabolic roles in iron oxidation, nutrient cycling, and plant interactions
Clara S. Chan, Gretchen E. Dykes, Rene L. Hoover, Matt A. Limmer, Angelia L. Seyfferth
Appl Environ Microbiol. 2023 Dec; 89(12): e00570-23. Published online 2023 Nov 27. doi: 10.1128/aem.00570-23
PMCID:
PMC10734482
ArticlePDF–1.6M
2.
Geomonas oryzae gen. nov., sp. nov., Geomonas edaphica sp. nov., Geomonas ferrireducens sp. nov., Geomonas terrae sp. nov., Four Ferric-Reducing Bacteria Isolated From Paddy Soil, and Reclassification of Three Species of the Genus Geobacter as Members of the Genus Geomonas gen. nov.
Zhenxing Xu, Yoko Masuda, Hideomi Itoh, Natsumi Ushijima, Yutaka Shiratori, Keishi Senoo
Front Microbiol. 2019; 10: 2201. Published online 2019 Sep 25. doi: 10.3389/fmicb.2019.02201
PMCID:
PMC6773877
ArticlePDF–4.6M
3.
A puzzling homology: a brittle star using a putative cnidarian-type luciferase for bioluminescence
Jérôme Delroisse, Esther Ullrich-Lüter, Stefanie Blaue, Olga Ortega-Martinez, Igor Eeckhaut, Patrick Flammang, Jérôme Mallefet
Open Biol. 2017 Apr; 7(4): 160300. Published online 2017 Apr 5. doi: 10.1098/rsob.160300
PMCID:
PMC5413902
ArticlePDF–1.5M
4.
Mechanistic insights into c-di-GMP–dependent control of the biofilm regulator FleQ from Pseudomonas aeruginosa
Bruno Y. Matsuyama, Petya V. Krasteva, Claudine Baraquet, Caroline S. Harwood, Holger Sondermann, Marcos V. A. S. Navarro
Proc Natl Acad Sci U S A. 2016 Jan 12; 113(2): E209–E218. Published online 2015 Dec 28. doi: 10.1073/pnas.1523148113
PMCID:
PMC4720306
ArticlePDF–2.0M
5.
Carboxydotrophic growth of Geobacter sulfurreducens
Jeanine S. Geelhoed, Anne M. Henstra, Alfons J. M. Stams
Appl Microbiol Biotechnol. 2016; 100: 997–1007. Published online 2015 Oct 19. doi: 10.1007/s00253-015-7033-z
PMCID:
PMC4703632
ArticlePDF–987K
6.
Magnet-Facilitated Selection of Electrogenic Bacteria from Marine Sediment
Larisa Kiseleva, Justina Briliute, Irina V. Khilyas, David J. W. Simpson, Viacheslav Fedorovich, M. Cohen, Igor Goryanin
Biomed Res Int. 2015; 2015: 582471. Published online 2015 Oct 4. doi: 10.1155/2015/582471
PMCID:
PMC4609349
ArticlePDF–1.7M
7.
Re-analysis of omics data indicates Smithella may degrade alkanes by addition to fumarate under methanogenic conditions
Boonfei Tan, Camilla Nesbø, Julia Foght
ISME J. 2014 Dec; 8(12): 2353–2356. Published online 2014 May 27. doi: 10.1038/ismej.2014.87
PMCID:
PMC4260707
ArticlePDF–814K
8.
Nitrogen Fertilization Has a Stronger Effect on Soil Nitrogen-Fixing Bacterial Communities than Elevated Atmospheric CO2
Sean T. Berthrong, Chris M. Yeager, Laverne Gallegos-Graves, Blaire Steven, Stephanie A. Eichorst, Robert B. Jackson, Cheryl R. Kuske
Appl Environ Microbiol. 2014 May; 80(10): 3103–3112. doi: 10.1128/AEM.04034-13
PMCID:
PMC4018900
ArticlePDF–1.0M
9.
The MprB Extracytoplasmic Domain Negatively Regulates Activation of the Mycobacterium tuberculosis MprAB Two-Component System
Daniel J. Bretl, Tarin M. Bigley, Scott S. Terhune, Thomas C. Zahrt
J Bacteriol. 2014 Jan; 196(2): 391–406. doi: 10.1128/JB.01064-13
PMCID:
PMC3911260
ArticlePDF–2.0M
10.
Comparative Metagenomics of Anode-Associated Microbiomes Developed in Rice Paddy-Field Microbial Fuel Cells
Atsushi Kouzuma, Takuya Kasai, Gen Nakagawa, Ayaka Yamamuro, Takashi Abe, Kazuya Watanabe
PLoS One. 2013; 8(11): e77443. Published online 2013 Nov 1. doi: 10.1371/journal.pone.0077443
PMCID:
PMC3815305
ArticlePDF–887K
11.
Gene Expression Correlates with Process Rates Quantified for Sulfate- and Fe(III)-Reducing Bacteria in U(VI)-Contaminated Sediments
Denise M. Akob, Sang Hyon Lee, Mili Sheth, Kirsten Küsel, David B. Watson, Anthony V. Palumbo, Joel E. Kostka, Kuk-Jeong Chin
Front Microbiol. 2012; 3: 280. Published online 2012 Aug 9. doi: 10.3389/fmicb.2012.00280
PMCID:
PMC3415069
ArticlePDF–1.6M
12.
Combined Application of PCR-Based Functional Assays for the Detection of Aromatic-Compound-Degrading Anaerobes
Kevin Kuntze, Carsten Vogt, Hans-Hermann Richnow, Matthias Boll
Appl Environ Microbiol. 2011 Jul; 77(14): 5056–5061. doi: 10.1128/AEM.00335-11
PMCID:
PMC3147403
ArticlePDF–961K
13.
Recent advance of microbial mercury methylation in the environment
Xuya Peng, Yan Yang, Shu Yang, Lei Li, Liyan Song
Appl Microbiol Biotechnol. 2024; 108(1): 235. Published online 2024 Feb 26. doi: 10.1007/s00253-023-12967-6
PMCID:
PMC10896945
ArticlePDF–1.9M
14.
Mining-impacted rice paddies select for Archaeal methylators and reveal a putative (Archaeal) regulator of mercury methylation
Rui Zhang, Stéphane Aris-Brosou, Veronika Storck, Jiang Liu, Mahmoud A. Abdelhafiz, Xinbin Feng, Bo Meng, Alexandre J. Poulain
ISME Commun. 2023; 3: 74. Published online 2023 Jul 15. doi: 10.1038/s43705-023-00277-x
PMCID:
PMC10349881
ArticlePDF–4.7M
15.
SEPHS1: Its Evolution, Function and Roles in Development and Diseases
Jeyoung Bang, Donghyun Kang, Jisu Jung, Tack-Jin Yoo, Myung Sup Shim, Vadim N. Gladyshev, Petra A. Tsuji, Dolph L. Hatfield, Jin-Hong Kim, Byeong Jae Lee
Arch Biochem Biophys. Author manuscript; available in PMC 2023 Nov 15.
Published in final edited form as: Arch Biochem Biophys. 2022 Nov 15; 730: 109426. Published online 2022 Oct 4. doi: 10.1016/j.abb.2022.109426
PMCID:
PMC9648052
ArticlePDF–1.4M
16.
“Working on microbes in everything”: an interview with Denise Akob on the natural microbiome and sustainability
Commun Biol. 2021; 4: 784. Published online 2021 Jun 25. doi: 10.1038/s42003-021-02300-0
PMCID:
PMC8233363
ArticlePDF–420K
17.
Expanding the Enzyme Repertoire for Sugar Nucleotide Epimerization: the CDP-Tyvelose 2-Epimerase from Thermodesulfatator atlanticus for Glucose/Mannose Interconversion
Christian Rapp, Stevie van Overtveldt, Koen Beerens, Hansjörg Weber, Tom Desmet, Bernd Nidetzky
Appl Environ Microbiol. 2021 Feb; 87(4): e02131-20. Prepublished online 2020 Dec 4. Published online 2021 Jan 29. doi: 10.1128/AEM.02131-20
PMCID:
PMC7851689
ArticlePDF–2.2M
18.
Description of Three Novel Members in the Family Geobacteraceae, Oryzomonas japonicum gen. nov., sp. nov., Oryzomonas sagensis sp. nov., and Oryzomonas ruber sp. nov.
Zhenxing Xu, Yoko Masuda, Chie Hayakawa, Natsumi Ushijima, Keisuke Kawano, Yutaka Shiratori, Keishi Senoo, Hideomi Itoh
Microorganisms. 2020 May; 8(5): 634. Published online 2020 Apr 27. doi: 10.3390/microorganisms8050634
PMCID:
PMC7285026
ArticlePDF–8.8M
19.
Adaptations to High Salt in a Halophilic Protist: Differential Expression and Gene Acquisitions through Duplications and Gene Transfers
Tommy Harding, Andrew J. Roger, Alastair G. B. Simpson
Front Microbiol. 2017; 8: 944. Published online 2017 May 29. doi: 10.3389/fmicb.2017.00944
PMCID:
PMC5447177
ArticlePDF–7.7M
20.
Comparative Genomics of Four Isosphaeraceae Planctomycetes: A Common Pool of Plasmids and Glycoside Hydrolase Genes Shared by Paludisphaera borealis PX4T, Isosphaera pallida IS1BT, Singulisphaera acidiphila DSM 18658T, and Strain SH-PL62
Anastasia A. Ivanova, Daniil G. Naumoff, Kirill K. Miroshnikov, Werner Liesack, Svetlana N. Dedysh
Front Microbiol. 2017; 8: 412. Published online 2017 Mar 16. doi: 10.3389/fmicb.2017.00412
PMCID:
PMC5352709
ArticlePDF–4.6M

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