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Items: 1 to 20 of 57

1.
Existence and distribution of novel phylotypes of Nitrospira in water columnsof the South China Sea
Wei Sun, Lijing Jiao, Jiapeng Wu, Jiaqi Ye, Mingken Wei, Yiguo Hong
iScience. 2022 Sep 16; 25(9): 104895. Published online 2022 Aug 8. doi: 10.1016/j.isci.2022.104895
PMCID:
PMC9418846
ArticlePubReaderPDF–3.3MCite
2.
Integrating Genome-Resolved Metagenomics with Trait-Based Process Modeling to Determine Biokinetics of Distinct Nitrifying Communities within Activated Sludge
Pranav Sampara, Yaqian Luo, Xuan Lin, Ryan M. Ziels
Environ Sci Technol. 2022 Aug 16; 56(16): 11670–11682. Published online 2022 Aug 5. doi: 10.1021/acs.est.2c02081
PMCID:
PMC9387530
ArticlePubReaderPDF–3.8MCite
3.
Biochemistry shapes growth kinetics of nitrifiers and defines their activity under specific environmental conditions
Eloi Martinez‐Rabert, Cindy J. Smith, William T. Sloan, Rebeca González‐Cabaleiro
Biotechnol Bioeng. 2022 May; 119(5): 1290–1300. Published online 2022 Feb 11. doi: 10.1002/bit.28045
PMCID:
PMC9303882
ArticlePubReaderPDF–1.4MCite
4.
Nitrogen Kinetic Isotope Effects of Nitrification by the Complete Ammonia Oxidizer Nitrospira inopinata
Shurong Liu, Man-Young Jung, Shasha Zhang, Michael Wagner, Holger Daims, Wolfgang Wanek
mSphere. 2021 Nov-Dec; 6(6): e00634-21. Published online 2021 Dec 8. doi: 10.1128/mSphere.00634-21
PMCID:
PMC8653837
ArticlePubReaderPDF–1.6MCite
5.
Nitrification mainly driven by ammonia-oxidizing bacteria and nitrite-oxidizing bacteria in an anammox-inoculated wastewater treatment system
Jing Lu, Yiguo Hong, Ying Wei, Ji-Dong Gu, Jiapeng Wu, Yu Wang, Fei Ye, Jih-Gaw Lin
AMB Express. 2021; 11: 158. Published online 2021 Nov 27. doi: 10.1186/s13568-021-01321-6
PMCID:
PMC8627542
ArticlePubReaderPDF–1.8MCite
6.
Metabolic versatility of the nitrite-oxidizing bacterium Nitrospira marina and its proteomic response to oxygen-limited conditions
Barbara Bayer, Mak A. Saito, Matthew R. McIlvin, Sebastian Lücker, Dawn M. Moran, Thomas S. Lankiewicz, Christopher L. Dupont, Alyson E. Santoro
ISME J. 2021 Apr; 15(4): 1025–1039. Published online 2020 Nov 23. doi: 10.1038/s41396-020-00828-3
PMCID:
PMC8115632
ArticlePubReaderPDF–1.0MCite
7.
In-field bioreactors demonstrate dynamic shifts in microbial communities in response to geochemical perturbations
Regina L. Wilpiszeski, Caitlin M. Gionfriddo, Ann M. Wymore, Ji-Won Moon, Kenneth A. Lowe, Mircea Podar, Sa’ad Rafie, Matthew W. Fields, Terry C. Hazen, Xiaoxuan Ge, Farris Poole, Michael W. W. Adams, Romy Chakraborty, Yupeng Fan, Joy D. Van Nostrand, Jizhong Zhou, Adam P. Arkin, Dwayne A. Elias
PLoS One. 2020; 15(9): e0232437. Published online 2020 Sep 28. doi: 10.1371/journal.pone.0232437
PMCID:
PMC7521895
ArticlePubReaderPDF–2.2MCite
8.
Exploring the upper pH limits of nitrite oxidation: diversity, ecophysiology, and adaptive traits of haloalkalitolerant Nitrospira
Anne Daebeler, Katharina Kitzinger, Hanna Koch, Craig W. Herbold, Michaela Steinfeder, Jasmin Schwarz, Thomas Zechmeister, Søren M. Karst, Mads Albertsen, Per H. Nielsen, Michael Wagner, Holger Daims
ISME J. 2020 Dec; 14(12): 2967–2979. Published online 2020 Jul 24. doi: 10.1038/s41396-020-0724-1
PMCID:
PMC7784846
ArticlePubReaderPDF–2.0MCite
9.
Evolution of Predicted Acid Resistance Mechanisms in the Extremely Acidophilic Leptospirillum Genus
Eva Vergara, Gonzalo Neira, Carolina González, Diego Cortez, Mark Dopson, David S. Holmes
Genes (Basel) 2020 Apr; 11(4): 389. Published online 2020 Apr 3. doi: 10.3390/genes11040389
PMCID:
PMC7231039
ArticlePubReaderPDF–3.7MCite
10.
Monitoring and managing microbes in aquaculture – Towards a sustainable industry
Mikkel Bentzon‐Tilia, Eva C. Sonnenschein, Lone Gram
Microb Biotechnol. 2016 Sep; 9(5): 576–584. Published online 2016 Jul 24. doi: 10.1111/1751-7915.12392
PMCID:
PMC4993175
ArticlePubReaderPDF–255KCite
11.
Hydrogen peroxide detoxification is a key mechanism for growth of ammonia-oxidizing archaea
Jong-Geol Kim, Soo-Je Park, Jaap S. Sinninghe Damsté, Stefan Schouten, W. Irene C. Rijpstra, Man-Young Jung, So-Jeong Kim, Joo-Han Gwak, Heeji Hong, Ok-Ja Si, SangHoon Lee, Eugene L. Madsen, Sung-Keun Rhee
Proc Natl Acad Sci U S A. 2016 Jul 12; 113(28): 7888–7893. Published online 2016 Jun 23. doi: 10.1073/pnas.1605501113
PMCID:
PMC4948306
ArticlePubReaderPDF–1020KCite
12.
Inhabitancy of active Nitrosopumilus-like ammonia-oxidizing archaea and Nitrospira nitrite-oxidizing bacteria in the sponge Theonella swinhoei
Guofang Feng, Wei Sun, Fengli Zhang, Loganathan Karthik, Zhiyong Li
Sci Rep. 2016; 6: 24966. Published online 2016 Apr 26. doi: 10.1038/srep24966
PMCID:
PMC4844951
ArticlePubReaderPDF–1.8MCite
13.
The effects of salinity on nitrification using halophilic nitrifiers in a Sequencing Batch Reactor treating hypersaline wastewater
You-Wei Cui, Hong-Yu Zhang, Jie-Ran Ding, Yong-Zhen Peng
Sci Rep. 2016; 6: 24825. Published online 2016 Apr 25. doi: 10.1038/srep24825
PMCID:
PMC4843016
ArticlePubReaderPDF–1.6MCite
14.
Ecological patterns, diversity and core taxa of microbial communities in groundwater-fed rapid gravity filters
Arda Gülay, Sanin Musovic, Hans-Jørgen Albrechtsen, Waleed Abu Al-Soud, Søren J Sørensen, Barth F Smets
ISME J. 2016 Sep; 10(9): 2209–2222. Published online 2016 Mar 8. doi: 10.1038/ismej.2016.16
PMCID:
PMC4989307
ArticlePubReaderPDF–1.1MCite
15.
A novel marine nitrite-oxidizing Nitrospira species from Dutch coastal North Sea water
Suzanne C. M. Haaijer, Ke Ji, Laura van Niftrik, Alexander Hoischen, Daan Speth, Mike S. M. Jetten, Jaap S. Sinninghe Damsté, Huub J. M. Op den Camp
Front Microbiol. 2013; 4: 60. Published online 2013 Mar 18. doi: 10.3389/fmicb.2013.00060
PMCID:
PMC3600790
ArticlePubReaderPDF–2.3MCite
16.
Low-Dissolved-Oxygen Nitrifying Systems Exploit Ammonia-Oxidizing Bacteria with Unusually High Yields
Micol Bellucci, Irina D. Ofiţeru, David W. Graham, Ian M. Head, Thomas P. Curtis
Appl Environ Microbiol. 2011 Nov; 77(21): 7787–7796. doi: 10.1128/AEM.00330-11
PMCID:
PMC3209145
ArticlePubReaderPDF–1.0MCite
17.
Microbial Ecology of the Dark Ocean above, at, and below the Seafloor
Beth N. Orcutt, Jason B. Sylvan, Nina J. Knab, Katrina J. Edwards
Microbiol Mol Biol Rev. 2011 Jun; 75(2): 361–422. doi: 10.1128/MMBR.00039-10
PMCID:
PMC3122624
ArticlePubReaderPDF–9.2MCite
18.
Conservation of proteobacterial magnetosome genes and structures in an uncultivated member of the deep-branching Nitrospira phylum
Christian Jogler, Gerhard Wanner, Sebastian Kolinko, Martina Niebler, Rudolf Amann, Nikolai Petersen, Michael Kube, Richard Reinhardt, Dirk Schüler
Proc Natl Acad Sci U S A. 2011 Jan 18; 108(3): 1134–1139. Published online 2010 Dec 29. doi: 10.1073/pnas.1012694108
PMCID:
PMC3024689
ArticlePubReaderPDF–1.0MCite
19.
Effects of Aeration Cycles on Nitrifying Bacterial Populations and Nitrogen Removal in Intermittently Aerated Reactors
Cesar Mota, Melanie A. Head, Jennifer A. Ridenoure, Jay J. Cheng, Francis L. de los Reyes, III
Appl Environ Microbiol. 2005 Dec; 71(12): 8565–8572. doi: 10.1128/AEM.71.12.8565-8572.2005
PMCID:
PMC1317396
ArticlePubReaderPDF–206KCite
20.
Microbial Community Structure in Midgut and Hindgut of the Humus-Feeding Larva of Pachnoda ephippiata (Coleoptera: Scarabaeidae)
Markus Egert, Bianca Wagner, Thorsten Lemke, Andreas Brune, Michael W. Friedrich
Appl Environ Microbiol. 2003 Nov; 69(11): 6659–6668. doi: 10.1128/AEM.69.11.6659-6668.2003
PMCID:
PMC262301
ArticlePubReaderPDF–363KCite

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