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Items: 1 to 20 of 27

1.
Role of the Sulfonium Center in Determining Ligand Specificity of Human S-Adenosylmethionine Decarboxylase
Shridhar Bale, Wesley Brooks, Jeremiah W. Hanes, Arnold M. Mahesan, Wayne C. Guida, Steven E. Ealick
Biochemistry. Author manuscript; available in PMC 2010 Jul 14.
Published in final edited form as: Biochemistry. 2009 Jul 14; 48(27): 6423–6430. doi: 10.1021/bi900590m
PMCID:
PMC2730737
AbstractArticlePDF–1.6M
2.
Structural Basis for Putrescine Activation of Human S-Adenosylmethionine Decarboxylase
Shridhar Bale, Maria M. Lopez, George I. Makhatadze, Qingming Fang, Anthony E. Pegg, Steven E. Ealick
Biochemistry. 2008 Dec 16; 47(50): 13404–13417. Published online 2008 Nov 17. doi: 10.1021/bi801732m
PMCID:
PMC2646671
AbstractArticlePDF–3.6M
3.
mTORC1-dependent AMD1 regulation sustains polyamine metabolism in prostate cancer
Amaia Zabala-Letona, Amaia Arruabarrena-Aristorena, Natalia Martín-Martín, Sonia Fernandez-Ruiz, James D. Sutherland, Michelle Clasquin, Julen Tomas-Cortazar, Jose Jimenez, Ines Torres, Phong Quang, Pilar Ximenez-Embun, Ruzica Bago, Aitziber Ugalde-Olano, Ana Loizaga-Iriarte, Isabel Lacasa-Viscasillas, Miguel Unda, Verónica Torrano, Diana Cabrera, Sebastiaan M. van Liempd, Ylenia Cendon, Elena Castro, Stuart Murray, Ajinkya Revandkar, Andrea Alimonti, Yinan Zhang, Amelia Barnett, Gina Lein, David Pirman, Ana R. Cortazar, Leire Arreal, Ludmila Prudkin, Ianire Astobiza, Lorea Valcarcel-Jimenez, Patricia Zuñiga-García, Itziar Fernandez-Dominguez, Marco Piva, Alfredo Caro-Maldonado, Pilar Sánchez-Mosquera, Mireia Castillo-Martín, Violeta Serra, Naiara Beraza, Antonio Gentilella, George Thomas, Mikel Azkargorta, Felix Elortza, Rosa Farràs, David Olmos, Alejo Efeyan, Juan Anguita, Javier Muñoz, Juan M. Falcón-Pérez, Rosa Barrio, Teresa Macarulla, Jose M. Mato, Maria L. Martinez-Chantar, Carlos Cordon-Cardo, Ana M. Aransay, Kevin Marks, José Baselga, Josep Tabernero, Paolo Nuciforo, Brendan D. Manning, Katya Marjon, Arkaitz Carracedo
Nature. Author manuscript; available in PMC 2017 Dec 28.
Published in final edited form as: Nature. 2017 Jul 6; 547(7661): 109–113. Published online 2017 Jun 28. doi: 10.1038/nature22964
PMCID:
PMC5505479
AbstractArticlePDF–4.6M
4.
Genetic Variant of AMD1 Is Associated with Obesity in Urban Indian Children
Rubina Tabassum, Alok Jaiswal, Ganesh Chauhan, Om Prakash Dwivedi, Saurabh Ghosh, Raman K. Marwaha, Nikhil Tandon, Dwaipayan Bharadwaj
PLoS One. 2012; 7(4): e33162. Published online 2012 Apr 9. doi: 10.1371/journal.pone.0033162
PMCID:
PMC3322123
AbstractArticlePDF–429K
5.
Genetic Variants in RUNX3, AMD1 and MSRA in the Methionine Metabolic Pathway and Survival in Non-small Cell Lung Cancer Patients
Ka Chen, Hongliang Liu, Zhensheng Liu, Sheng Luo, Edward F. Patz, Jr., Patricia G. Moorman, Li Su, Sipeng Shen, David C. Christiani, Qingyi Wei
Int J Cancer. Author manuscript; available in PMC 2019 Nov 4.
Published in final edited form as: Int J Cancer. 2019 Aug 1; 145(3): 621–631. Published online 2019 Feb 1. doi: 10.1002/ijc.32128
PMCID:
PMC6828159
AbstractArticlePDF–454K
6.
Effects of promoter methylation on increased expression of polyamine biosynthetic genes in suicide
Jeffrey A. Gross, Laura M. Fiori, Benoit Labonté, Juan Pablo Lopez, Gustavo Turecki
J Psychiatr Res. Author manuscript; available in PMC 2017 Feb 6.
Published in final edited form as: J Psychiatr Res. 2013 Apr; 47(4): 513–519. Published online 2012 Dec 20. doi: 10.1016/j.jpsychires.2012.11.016
PMCID:
PMC5293536
AbstractArticlePDF–1.5M
7.
Common variants in LEPR, IL6, AMD1, and NAMPT do not associate with risk of juvenile and childhood obesity in Danes: a case–control study
Mette Hollensted, Tarunveer S Ahluwalia, Christian Theil Have, Niels Grarup, Cilius Esmann Fonvig, Tenna Ruest Haarmark Nielsen, Cæcilie Trier, Lavinia Paternoster, Oluf Pedersen, Jens-Christian Holm, Thorkild I A Sørensen, Torben Hansen
BMC Med Genet. 2015; 16: 105. Published online 2015 Nov 11. doi: 10.1186/s12881-015-0253-3
PMCID:
PMC4642628
AbstractArticlePDF–458K
8.
AMD1 upregulates hepatocellular carcinoma cells stemness by FTO mediated mRNA demethylation
Xinyu Bian, Dongmin Shi, Kailin Xing, Hongxin Zhou, Lili Lu, Dahai Yu, Weizhong Wu
Clin Transl Med. 2021 Mar; 11(3): e352. Published online 2021 Mar 24. doi: 10.1002/ctm2.352
PMCID:
PMC7989706
AbstractArticlePDF–15M
9.
Plasma Complement Components and Activation Fragments: Associations with Age-Related Macular Degeneration Genotypes and Phenotypes
Robyn Reynolds, M. Elizabeth Hartnett, John P. Atkinson, Patricia C. Giclas, Bernard Rosner, Johanna M. Seddon
Invest Ophthalmol Vis Sci. Author manuscript; available in PMC 2010 Feb 23.
Published in final edited form as: Invest Ophthalmol Vis Sci. 2009 Dec; 50(12): 5818–5827. Published online 2009 Aug 6. doi: 10.1167/iovs.09-3928
PMCID:
PMC2826794
AbstractArticlePDF–369K
10.
A Candidate Gene Study of Folate-Associated One Carbon Metabolism Genes and Colorectal Cancer Risk
A. Joan Levine, Jane C. Figueiredo, Won Lee, David V. Conti, Kathleen Kennedy, David J Duggan, Jenny N. Poynter, Peter T. Campbell, Polly Newcomb, Maria Elena Martinez, John L. Hopper, Loic Le Marchand, John A. Baron, Paul J. Limburg, Cornelia M. Ulrich, Robert W. Haile
Cancer Epidemiol Biomarkers Prev. Author manuscript; available in PMC 2011 Jul 1.
Published in final edited form as: Cancer Epidemiol Biomarkers Prev. 2010 Jul; 19(7): 1812–1821. doi: 10.1158/1055-9965.EPI-10-0151
PMCID:
PMC2950115
AbstractArticlePDF–280K
11.
The Functional Landscape of Hsp27 Reveals New Cellular Processes such as DNA Repair and Alternative Splicing and Proposes Novel Anticancer Targets
Maria Katsogiannou, Claudia Andrieu, Virginie Baylot, Anaïs Baudot, Nelson J. Dusetti, Odile Gayet, Pascal Finetti, Carmen Garrido, Daniel Birnbaum, François Bertucci, Christine Brun, Palma Rocchi
Mol Cell Proteomics. 2014 Dec; 13(12): 3585–3601. Published online 2014 Oct 1. doi: 10.1074/mcp.M114.041228
PMCID:
PMC4256507
AbstractArticlePDF–3.9M
12.
Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains
Jean-Philippe Lambert, Sarah Picaud, Takao Fujisawa, Huayun Hou, Pavel Savitsky, Liis Uusküla-Reimand, Gagan D. Gupta, Hala Abdouni, Zhen-Yuan Lin, Monika Tucholska, James D.R. Knight, Beatriz Gonzalez-Badillo, Nicole St-Denis, Joseph A. Newman, Manuel Stucki, Laurence Pelletier, Nuno Bandeira, Michael D. Wilson, Panagis Filippakopoulos, Anne-Claude Gingras
Mol Cell. 2019 Feb 7; 73(3): 621–638.e17. doi: 10.1016/j.molcel.2018.11.006
PMCID:
PMC6375729
AbstractArticlePDF–10M
13.
CLEC16A interacts with retromer and TRIM27, and its loss impairs endosomal trafficking and neurodevelopment
Daphne J. Smits, Jordy Dekker, Rachel Schot, Brahim Tabarki, Amal Alhashem, Jeroen A. A. Demmers, Dick H. W. Dekkers, Antonio Romito, Peter J. van der Spek, Tjakko J. van Ham, Aida M. Bertoli-Avella, Grazia M. S. Mancini
Hum Genet. 2023; 142(3): 379–397. Published online 2022 Dec 20. doi: 10.1007/s00439-022-02511-3
PMCID:
PMC9950183
AbstractArticlePDF–2.4M
14.
A protein interaction landscape of breast cancer
Minkyu Kim, Jisoo Park, Mehdi Bouhaddou, Kyumin Kim, Ajda Rojc, Maya Modak, Margaret Soucheray, Michael J. McGregor, Patrick O’Leary, Denise Wolf, Erica Stevenson, Tzeh Keong Foo, Dominique Mitchell, Kari A. Herrington, Denise P. Muñoz, Beril Tutuncuoglu, Kuei-Ho Chen, Fan Zheng, Jason F. Kreisberg, Morgan E. Diolaiti, John D. Gordan, Jean-Philippe Coppé, Danielle L. Swaney, Bing Xia, Laura van ’t Veer, Alan Ashworth, Trey Ideker, Nevan Krogan
Science. Author manuscript; available in PMC 2022 Apr 26.
Published in final edited form as: Science. 2021 Oct; 374(6563): eabf3066. Published online 2021 Oct 1. doi: 10.1126/science.abf3066
PMCID:
PMC9040556
AbstractArticlePDF–2.2M
15.
Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes
Jean-Philippe Lambert, Monika Tucholska, Christopher Go, James D.R. Knight, Anne-Claude Gingras
J Proteomics. Author manuscript; available in PMC 2016 Apr 6.
Published in final edited form as: J Proteomics. 2015 Apr 6; 118: 81–94. Published online 2014 Oct 2. doi: 10.1016/j.jprot.2014.09.011
PMCID:
PMC4383713
AbstractArticlePDF–1.4M
16.
A BioID-Derived Proximity Interactome for SARS-CoV-2 Proteins
Danielle G. May, Laura Martin-Sancho, Valesca Anschau, Sophie Liu, Rachel J. Chrisopulos, Kelsey L. Scott, Charles T. Halfmann, Ramon Díaz Peña, Dexter Pratt, Alexandre R. Campos, Kyle J. Roux
Viruses. 2022 Mar; 14(3): 611. Published online 2022 Mar 15. doi: 10.3390/v14030611
PMCID:
PMC8951556
AbstractArticlePDF–4.4M
17.
Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing
Teng Fei, Yiwen Chen, Tengfei Xiao, Wei Li, Laura Cato, Peng Zhang, Maura B. Cotter, Michaela Bowden, Rosina T. Lis, Shuang G. Zhao, Qiu Wu, Felix Y. Feng, Massimo Loda, Housheng Hansen He, X. Shirley Liu, Myles Brown
Proc Natl Acad Sci U S A. 2017 Jun 27; 114(26): E5207–E5215. Published online 2017 Jun 13. doi: 10.1073/pnas.1617467114
PMCID:
PMC5495225
AbstractArticlePDF–1.3M
18.
Ubiquitin-mediated proteolysis of HuR by heat shock
Kotb Abdelmohsen, Subramanya Srikantan, Xiaoling Yang, Ashish Lal, Hyeon Ho Kim, Yuki Kuwano, Stefanie Galban, Kevin G Becker, Davida Kamara, Rafael de Cabo, Myriam Gorospe
EMBO J. 2009 May 6; 28(9): 1271–1282. Published online 2009 Mar 26. doi: 10.1038/emboj.2009.67
PMCID:
PMC2683047
AbstractArticlePDF–1.4M
19.
Integrative oncogene-dependency mapping identifies RIT1 vulnerabilities and synergies in lung cancer
Athea Vichas, Amanda K. Riley, Naomi T. Nkinsi, Shriya Kamlapurkar, Phoebe C. R. Parrish, April Lo, Fujiko Duke, Jennifer Chen, Iris Fung, Jacqueline Watson, Matthew Rees, Austin M. Gabel, James D. Thomas, Robert K. Bradley, John K. Lee, Emily M. Hatch, Marina K. Baine, Natasha Rekhtman, Marc Ladanyi, Federica Piccioni, Alice H. Berger
Nat Commun. 2021; 12: 4789. Published online 2021 Aug 9. doi: 10.1038/s41467-021-24841-y
PMCID:
PMC8352964
AbstractArticlePDF–4.5M
20.
Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes
Kouichi Kimura, Ai Wakamatsu, Yutaka Suzuki, Toshio Ota, Tetsuo Nishikawa, Riu Yamashita, Jun-ichi Yamamoto, Mitsuo Sekine, Katsuki Tsuritani, Hiroyuki Wakaguri, Shizuko Ishii, Tomoyasu Sugiyama, Kaoru Saito, Yuko Isono, Ryotaro Irie, Norihiro Kushida, Takahiro Yoneyama, Rie Otsuka, Katsuhiro Kanda, Takahide Yokoi, Hiroshi Kondo, Masako Wagatsuma, Katsuji Murakawa, Shinichi Ishida, Tadashi Ishibashi, Asako Takahashi-Fujii, Tomoo Tanase, Keiichi Nagai, Hisashi Kikuchi, Kenta Nakai, Takao Isogai, Sumio Sugano
Genome Res. 2006 Jan; 16(1): 55–65. doi: 10.1101/gr.4039406
PMCID:
PMC1356129
AbstractArticlePDF–438K

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