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Items: 1 to 20 of 272

1.
Transcriptional Inhibition of Genes with Severe Histone H3 Hypoacetylation in the Coding Region
Arnold Kristjuhan, Jane Walker, Noriyuki Suka, Michael Grunstein, Douglas Roberts, Bradley R. Cairns, Jesper Q. Svejstrup
Mol Cell. Author manuscript; available in PMC 2022 Apr 24.
Published in final edited form as: Mol Cell. 2002 Oct; 10(4): 925–933. doi: 10.1016/s1097-2765(02)00647-0
PMCID:
PMC9035295
ArticlePDF–589K
2.
Structures and implications of TBP–nucleosome complexes
Haibo Wang, Le Xiong, Patrick Cramer
Proc Natl Acad Sci U S A. 2021 Jul 27; 118(30): e2108859118. Published online 2021 Jul 23. doi: 10.1073/pnas.2108859118
PMCID:
PMC8325331
ArticlePDF–2.1M
3.
Stress tolerance enhancement via SPT15 base editing in Saccharomyces cerevisiae
Yanfang Liu, Yuping Lin, Yufeng Guo, Fengli Wu, Yuanyuan Zhang, Xianni Qi, Zhen Wang, Qinhong Wang
Biotechnol Biofuels. 2021; 14: 155. Published online 2021 Jul 6. doi: 10.1186/s13068-021-02005-w
PMCID:
PMC8259078
ArticlePDF–3.3M
4.
TRIC: Capturing the direct cellular targets of promoter‐bound transcriptional activators
Amanda Dugan, Rachel Pricer, Micah Katz, Anna K. Mapp
Protein Sci. 2016 Aug; 25(8): 1371–1377. Published online 2016 Jun 13. doi: 10.1002/pro.2951
PMCID:
PMC4972194
ArticlePDF–719K
5.
Mutations on the DNA Binding Surface of TBP Discriminate between Yeast TATA and TATA-Less Gene Transcription
Ivanka Kamenova, Linda Warfield, Steven Hahn
Mol Cell Biol. 2014 Aug; 34(15): 2929–2943. doi: 10.1128/MCB.01685-13
PMCID:
PMC4135567
ArticlePDF–2.5M
6.
Independent RNA polymerase II preinitiation complex dynamics and nucleosome turnover at promoter sites in vivo
Yoselin Grimaldi, Paolo Ferrari, Michel Strubin
Genome Res. 2014 Jan; 24(1): 117–124. doi: 10.1101/gr.157792.113
PMCID:
PMC3875852
ArticlePDF–856K
7.
Sequential Recruitment of SAGA and TFIID in a Genomic Response to DNA Damage in Saccharomyces cerevisiae
Sujana Ghosh, B. Franklin Pugh
Mol Cell Biol. 2011 Jan; 31(1): 190–202. Published online 2010 Oct 18. doi: 10.1128/MCB.00317-10
PMCID:
PMC3019861
ArticlePDF–2.4M
8.
Yeast TATA Binding Protein Interaction with DNA: Fluorescence Determination of Oligomeric State, Equilibrium Binding, On-Rate, and Dissociation Kinetics
Gina M. Perez-Howard, P. Anthony Weil, Joseph M. Beechem
Biochemistry. Author manuscript; available in PMC 2010 Jun 24.
Published in final edited form as: Biochemistry. 1995 Jun 27; 34(25): 8005–8017. doi: 10.1021/bi00025a006
PMCID:
PMC2891535
ArticlePDF–2.5M
9.
Influence of the N-Terminal Domain and Divalent Cations on Self-Association and DNA Binding by the Saccharomyces cerevisiae TATA Binding Protein
Sergei Khrapunov, Michael Brenowitz
Biochemistry. Author manuscript; available in PMC 2008 Mar 7.
Published in final edited form as: Biochemistry. 2007 Apr 24; 46(16): 4876–4887. Published online 2007 Mar 23. doi: 10.1021/bi061651w
PMCID:
PMC2265637
ArticlePDF–988K
10.
Computer-Based Screening of Functional Conformers of Proteins
Héctor Marlosti Montiel Molina, César Millán-Pacheco, Nina Pastor, Gabriel del Rio
PLoS Comput Biol. 2008 Feb; 4(2): e1000009. Published online 2008 Feb 29. doi: 10.1371/journal.pcbi.1000009
PMCID:
PMC2265533
ArticlePDF–464K
11.
Multiple functions of the nonconserved N-terminal domain of yeast TATA-binding protein.
M Lee, K Struhl
Genetics. 2001 May; 158(1): 87–93. doi: 10.1093/genetics/158.1.87
PMCID:
PMC1461640
SummaryPDF–310K
12.
Stepwise Bending of DNA by a Single TATA-Box Binding Protein
Simon F. Tolić-Nørrelykke, Mette B. Rasmussen, Francesco S. Pavone, Kirstine Berg-Sørensen, Lene B. Oddershede
Biophys J. 2006 May 15; 90(10): 3694–3703. Published online 2006 Feb 24. doi: 10.1529/biophysj.105.074856
PMCID:
PMC1440750
ArticlePDF–309K
13.
Comparison of the Effect of Water Release on the Interaction of the Saccharomyces cerevisiae TATA Binding Protein (TBP) with “TATA Box” Sequences Composed of Adenosine or Inosine
Sergei Khrapunov, Michael Brenowitz
Biophys J. 2004 Jan; 86(1): 371–383. doi: 10.1016/S0006-3495(04)74113-2
PMCID:
PMC1303802
ArticlePDF–211K
14.
Selective binding of the TATA box-binding protein to the TATA box-containing promoter: analysis of structural and energetic factors.
L Pardo, N Pastor, H Weinstein
Biophys J. 1998 Nov; 75(5): 2411–2421. doi: 10.1016/S0006-3495(98)77685-4
PMCID:
PMC1299915
SummaryPDF–456K
15.
Global Role of TATA Box-Binding Protein Recruitment to Promoters in Mediating Gene Expression Profiles
Jonghwan Kim, Vishwanath R. Iyer
Mol Cell Biol. 2004 Sep; 24(18): 8104–8112. doi: 10.1128/MCB.24.18.8104-8112.2004
PMCID:
PMC515063
ArticlePDF–517K
16.
Requirement for acidic amino acid residues immediately N-terminal to the conserved domain of Saccharomyces cerevisiae TFIID.
Q A Zhou, M C Schmidt, A J Berk
EMBO J. 1991 Jul; 10(7): 1843–1852. doi: 10.1002/j.1460-2075.1991.tb07710.x
PMCID:
PMC452859
SummaryPage BrowsePDF–2.2M
17.
Probing TBP interactions in transcription initiation and reinitiation with RNA aptamers that act in distinct modes
Xiaochun Fan, Hua Shi, Karen Adelman, John T. Lis
Proc Natl Acad Sci U S A. 2004 May 4; 101(18): 6934–6939. Published online 2004 Apr 21. doi: 10.1073/pnas.0401523101
PMCID:
PMC406445
ArticlePDF–418K
18.
TBP mutants defective in activated transcription in vivo.
K M Arndt, S Ricupero-Hovasse, F Winston
EMBO J. 1995 Apr 3; 14(7): 1490–1497. doi: 10.1002/j.1460-2075.1995.tb07135.x
PMCID:
PMC398236
SummaryPage BrowsePDF–1.5M
19.
Biochemical and genetic characterization of a yeast TFIID mutant that alters transcription in vivo and DNA binding in vitro.
K M Arndt, S L Ricupero, D M Eisenmann, F Winston
Mol Cell Biol. 1992 May; 12(5): 2372–2382. doi: 10.1128/mcb.12.5.2372
PMCID:
PMC364409
SummaryPage BrowsePDF–2.9M
20.
The conserved carboxy-terminal domain of Saccharomyces cerevisiae TFIID is sufficient to support normal cell growth.
D Poon, S Schroeder, C K Wang, T Yamamoto, M Horikoshi, R G Roeder, P A Weil
Mol Cell Biol. 1991 Oct; 11(10): 4809–4821. doi: 10.1128/mcb.11.10.4809
PMCID:
PMC361446
SummaryPage BrowsePDF–3.3M

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