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Items: 16

1.
CHD1 loss sensitizes prostate cancer to DNA damaging therapy by promoting error-prone double-strand break repair
T. R. Shenoy, G. Boysen, M. Y. Wang, Q. Z. Xu, W. Guo, F. M. Koh, C. Wang, L. Z. Zhang, Y. Wang, V. Gil, S. Aziz, R. Christova, D. N. Rodrigues, M. Crespo, P. Rescigno, N. Tunariu, R. Riisnaes, Z. Zafeiriou, P. Flohr, W. Yuan, E. Knight, A. Swain, M. Ramalho-Santos, D. Y. Xu, J. de Bono, H. Wu
Ann Oncol. 2017 Jul; 28(7): 1495–1507. Published online 2017 Apr 5. doi: 10.1093/annonc/mdx165
PMCID:
PMC5834074
AbstractArticlePDF–1.4M
2.
Synthetic essentiality of chromatin remodeling factor CHD1 in PTEN deficient cancer
Di Zhao, Xin Lu, Guocan Wang, Zhengdao Lan, Wenting Liao, Jun Li, Xin Liang, Jasper Robin Chen, Sagar Shah, Xiaoying Shang, Ming Tang, Pingna Deng, Prasenjit Dey, Deepavali Chakravarti, Peiwen Chen, Denise J. Spring, Nora M. Navone, Patricia Troncoso, Jianhua Zhang, Y. Alan Wang, Ronald A. DePinho
Nature. Author manuscript; available in PMC 2017 May 30.
Published in final edited form as: Nature. 2017 Feb 23; 542(7642): 484–488. Published online 2017 Feb 6. doi: 10.1038/nature21357
PMCID:
PMC5448706
AbstractArticlePDF–1.9M
3.
NEURON-SPECIFIC SUMO KNOCKDOWN SUPPRESSES GLOBAL GENE EXPRESSION RESPONSE AND WORSENS FUNCTIONAL OUTCOME AFTER TRANSIENT FOREBRAIN ISCHEMIA IN MICE
LIN ZHANG, XIAOZHI LIU, HUAXIN SHENG, SHUAI LIU, YING LI, JULIA Q. ZHAO, DAVID S. WARNER, WULF PASCHEN, WEI YANG
Neuroscience. Author manuscript; available in PMC 2018 Feb 20.
Published in final edited form as: Neuroscience. 2017 Feb 20; 343: 190–212. Published online 2016 Dec 3. doi: 10.1016/j.neuroscience.2016.11.036
PMCID:
PMC5319602
AbstractArticlePDF–1.7M
4.
High-throughput discovery of novel developmental phenotypes
Mary E. Dickinson, Ann M. Flenniken, Xiao Ji, Lydia Teboul, Michael D. Wong, Jacqueline K. White, Terrence F. Meehan, Wolfgang J. Weninger, Henrik Westerberg, Hibret Adissu, Candice N. Baker, Lynette Bower, James M. Brown, L. Brianna Caddle, Francesco Chiani, Dave Clary, James Cleak, Mark J. Daly, James M. Denegre, Brendan Doe, Mary E. Dolan, Sarah M. Edie, Helmut Fuchs, Valerie Gailus-Durner, Antonella Galli, Alessia Gambadoro, Juan Gallegos, Shiying Guo, Neil R. Horner, Chih-wei Hsu, Sara J. Johnson, Sowmya Kalaga, Lance C. Keith, Louise Lanoue, Thomas N. Lawson, Monkol Lek, Manuel Mark, Susan Marschall, Jeremy Mason, Melissa L. McElwee, Susan Newbigging, Lauryl M.J. Nutter, Kevin A. Peterson, Ramiro Ramirez-Solis, Douglas J. Rowland, Edward Ryder, Kaitlin E. Samocha, John R. Seavitt, Mohammed Selloum, Zsombor Szoke-Kovacs, Masaru Tamura, Amanda G Trainor, Ilinca Tudose, Shigeharu Wakana, Jonathan Warren, Olivia Wendling, David B. West, Leeyean Wong, Atsushi Yoshiki, The International Mouse Phenotyping Consortium, Daniel G. MacArthur, Glauco P. Tocchini-Valentini, Xiang Gao, Paul Flicek, Allan Bradley, William C. Skarnes, Monica J. Justice, Helen E. Parkinson, Mark Moore, Sara Wells, Robert E. Braun, Karen L. Svenson, Martin Hrabe de Angelis, Yann Herault, Tim Mohun, Ann-Marie Mallon, R. Mark Henkelman, Steve D.M. Brown, David J. Adams, K.C. Kent Lloyd, Colin McKerlie, Arthur L. Beaudet, Maja Bucan, Stephen A. Murray
Nature. Author manuscript; available in PMC 2017 Mar 14.
Published in final edited form as: Nature. 2016 Sep 22; 537(7621): 508–514. Published online 2016 Sep 14. doi: 10.1038/nature19356
Correction in:
Nature. 2017 Nov 16; 551(7680): 398.
PMCID:
PMC5295821
AbstractArticlePDF–3.0M
5.
Regulation of hepatic microRNA expression by hepatocyte nuclear factor 4 alpha
Hong Lu, Xiaohong Lei, Jerry Liu, Curtis Klaassen
World J Hepatol. 2017 Feb 8; 9(4): 191–208. Published online 2017 Feb 8. doi: 10.4254/wjh.v9.i4.191
PMCID:
PMC5295159
AbstractArticlePDF–2.4M
6.
Loss of CHD1 causes DNA repair defects and enhances prostate cancer therapeutic responsiveness
Vijayalakshmi Kari, Wael Yassin Mansour, Sanjay Kumar Raul, Simon J Baumgart, Andreas Mund, Marian Grade, Hüseyin Sirma, Ronald Simon, Hans Will, Matthias Dobbelstein, Ekkehard Dikomey, Steven A Johnsen
EMBO Rep. 2016 Nov; 17(11): 1609–1623. Published online 2016 Sep 5. doi: 10.15252/embr.201642352
Correction in:
EMBO Rep. 2018 Oct; 19(10): e46783.
PMCID:
PMC5090703
AbstractArticlePDF–2.4M
7.
Emergence of hematopoietic stem and progenitor cells involves a Chd1-dependent increase in total nascent transcription
Fong Ming Koh, Carlos O. Lizama, Priscilla Wong, John S. Hawkins, Ann C. Zovein, Miguel Ramalho-Santos
Proc Natl Acad Sci U S A. 2015 Apr 7; 112(14): E1734–E1743. Published online 2015 Mar 23. doi: 10.1073/pnas.1424850112
PMCID:
PMC4394284
AbstractArticlePDF–1.9M
8.
Intermittent Hypoxia Mobilizes Bone Marrow-Derived Very Small Embryonic-Like Stem Cells and Activates Developmental Transcriptional Programs in Mice
Sina A. Gharib, Ehab A. Dayyat, Abdelnaby Khalyfa, Jinkwan Kim, Heather B. Clair, Magdalena Kucia, David Gozal
Sleep. 2010 Nov 1; 33(11): 1439–1446. doi: 10.1093/sleep/33.11.1439
PMCID:
PMC2954693
AbstractArticlePDF–1.7M
9.
Microarray Analysis Identifies Cerebellar Genes Sensitive to Chronic Ethanol Treatment in PKCγ Mice
Barbara J. Bowers, Richard A. Radcliffe, Amy M. Smith, Jill Miyamoto-Ditmon, Jeanne M. Wehner
Alcohol. Author manuscript; available in PMC 2007 Jul 24.
Published in final edited form as: Alcohol. 2006 Aug; 40(1): 19–33. doi: 10.1016/j.alcohol.2006.09.004
PMCID:
PMC1931504
AbstractArticlePDF–110K
10.
The tumor suppressor menin regulates hematopoiesis and myeloid transformation by influencing Hox gene expression
Ya-Xiong Chen, Jizhou Yan, Karen Keeshan, Anthony T. Tubbs, Haoren Wang, Albert Silva, Eric J. Brown, Jay L. Hess, Warren S. Pear, Xianxin Hua
Proc Natl Acad Sci U S A. 2006 Jan 24; 103(4): 1018–1023. Published online 2006 Jan 13. doi: 10.1073/pnas.0510347103
PMCID:
PMC1326489
AbstractArticlePDF–393K
11.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
12.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M
13.
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells
Doug Stryke, Michiko Kawamoto, Conrad C. Huang, Susan J. Johns, Leslie A. King, Courtney A. Harper, Elaine C. Meng, Roy E. Lee, Alice Yee, Larry L'Italien, Pao-Tien Chuang, Stephen G. Young, William C. Skarnes, Patricia C. Babbitt, Thomas E. Ferrin
Nucleic Acids Res. 2003 Jan 1; 31(1): 278–281. doi: 10.1093/nar/gkg064
PMCID:
PMC165511
AbstractArticlePDF–217K
14.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K
15.
A mammalian DNA-binding protein that contains a chromodomain and an SNF2/SWI2-like helicase domain.
V Delmas, D G Stokes, R P Perry
Proc Natl Acad Sci U S A. 1993 Mar 15; 90(6): 2414–2418. doi: 10.1073/pnas.90.6.2414
PMCID:
PMC46097
SummaryPage BrowsePDF–2.2M
16.
Characterization of the CHD family of proteins
Trevor Woodage, Munira A. Basrai, Andreas D. Baxevanis, Philip Hieter, Francis S. Collins
Proc Natl Acad Sci U S A. 1997 Oct 14; 94(21): 11472–11477. doi: 10.1073/pnas.94.21.11472
PMCID:
PMC23509
AbstractArticlePDF–338K

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