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Items: 1 to 20 of 681

1.
HIV-1 reverse transcriptase and protease mutations for drug-resistance detection among treatment-experienced and naïve HIV-infected individuals
Farah Bokharaei-Salim, Maryam Esghaei, Khadijeh Khanaliha, Saeed Kalantari, Arezoo Marjani, Atousa Fakhim, Hossein Keyvani
PLoS One. 2020; 15(3): e0229275. Published online 2020 Mar 2. doi: 10.1371/journal.pone.0229275
PMCID:
PMC7051075
ArticlePDF–886K
2.
Characterisation of HIV-1 Molecular Epidemiology in Nigeria: Origin, Diversity, Demography and Geographic Spread
Jamirah Nazziwa, Nuno Rodrigues Faria, Beth Chaplin, Holly Rawizza, Phyllis Kanki, Patrick Dakum, Alash’le Abimiku, Man Charurat, Nicaise Ndembi, Joakim Esbjörnsson
Sci Rep. 2020; 10: 3468. Published online 2020 Feb 26. doi: 10.1038/s41598-020-59944-x
PMCID:
PMC7044301
ArticlePDF–1.8M
3.
HLA Heterozygote Advantage against HIV-1 Is Driven by Quantitative and Qualitative Differences in HLA Allele-Specific Peptide Presentation
Jatin Arora, Federica Pierini, Paul J McLaren, Mary Carrington, Jacques Fellay, Tobias L Lenz
Mol Biol Evol. 2020 Mar; 37(3): 639–650. Published online 2019 Oct 22. doi: 10.1093/molbev/msz249
PMCID:
PMC7038656
ArticlePDF–700K
4.
Prevalence of Non-B HIV-1 Subtypes in North Italy and Analysis of Transmission Clusters Based on Sequence Data Analysis
Giovanni Lorenzin, Franco Gargiulo, Arnaldo Caruso, Francesca Caccuri, Emanuele Focà, Anna Celotti, Eugenia Quiros-Roldan, Ilaria Izzo, Francesco Castelli, Maria A. De Francesco
Microorganisms. 2020 Jan; 8(1): 36. Published online 2019 Dec 23. doi: 10.3390/microorganisms8010036
PMCID:
PMC7022943
ArticlePDF–6.1M
5.
Full-length title: Dramatic HIV DNA degradation associated with spontaneous HIV suppression and disease-free outcome in a young seropositive woman following her infection
Philippe Colson, Catherine Dhiver, Catherine Tamalet, Jeremy Delerce, Olga O. Glazunova, Maxime Gaudin, Anthony Levasseur, Didier Raoult
Sci Rep. 2020; 10: 2548. Published online 2020 Feb 13. doi: 10.1038/s41598-020-58969-6
Correction in:
Sci Rep. 2020; 10: 14829.
PMCID:
PMC7018955
ArticlePDF–1.7M
6.
HIV-1 subtypes and drug resistance mutations among female sex workers varied in different cities and regions of the Democratic Republic of Congo
Eun Hee Kwon, Godefroid M. A. Musema, Jessica Boelter, Sydney Townsend, Désiré Tshala-Katumbay, Patrick K. Kayembe, John West, Charles Wood
PLoS One. 2020; 15(2): e0228670. Published online 2020 Feb 11. doi: 10.1371/journal.pone.0228670
PMCID:
PMC7012409
ArticlePDF–1.4M
7.
A cross-sectional study to characterize local HIV-1 dynamics in Washington, DC using next-generation sequencing
Keylie M. Gibson, Kamwing Jair, Amanda D. Castel, Matthew L. Bendall, Brittany Wilbourn, Jeanne A. Jordan, Keith A. Crandall, Marcos Pérez-Losada, the DC Cohort Executive Committee
Sci Rep. 2020; 10: 1989. Published online 2020 Feb 6. doi: 10.1038/s41598-020-58410-y
Correction in:
Sci Rep. 2020; 10: 7099.
PMCID:
PMC7004982
ArticlePDF–1.6M
8.
Viral and Host Factors are Related to the Progression of HIV Diseases in Mimika, Papua
Mirna Widiyanti, Moch Irfan Hadi
Open Access Maced J Med Sci. 2019 Oct 30; 7(20): 3429–3432. Published online 2019 Oct 14. doi: 10.3889/oamjms.2019.437
PMCID:
PMC6980796
ArticlePDF–191K
9.
Evaluation of screening platforms for virus-like particle production with the baculovirus expression vector system in insect cells
Florian Strobl, Sahar Masoumeh Ghorbanpour, Dieter Palmberger, Gerald Striedner
Sci Rep. 2020; 10: 1065. Published online 2020 Jan 23. doi: 10.1038/s41598-020-57761-w
PMCID:
PMC6978312
ArticlePDF–1.5M
10.
Genome-scale analysis of evolutionary rate and selection in a fast-expanding Spanish cluster of HIV-1 subtype F1
Juan Á. Patiño-Galindo, Francisco Domínguez, María T. Cuevas, Elena Delgado, Mónica Sánchez, Lucía Pérez-Álvarez, Michael M. Thomson, Rafael Sanjuán, Fernando González-Candelas, José M. Cuevas
Infect Genet Evol. Author manuscript; available in PMC 2020 Jan 23.
Published in final edited form as: Infect Genet Evol. 2018 Dec 1; 66: 43–47. Published online 2018 Sep 13. doi: 10.1016/j.meegid.2018.09.008
PMCID:
PMC6978151
ArticlePDF–668K
11.
HIV chromatin is a preferred target for drugs that bind in the DNA minor groove
Clayton K. Collings, Donald W. Little, III, Samuel J. Schafer, John N. Anderson
PLoS One. 2019; 14(12): e0216515. Published online 2019 Dec 30. doi: 10.1371/journal.pone.0216515
PMCID:
PMC6936835
ArticlePDF–2.6M
12.
HIV-1 Reverse Transcriptase Promotes Tumor Growth and Metastasis Formation via ROS-Dependent Upregulation of Twist
Ekaterina Bayurova, Juris Jansons, Dace Skrastina, Olga Smirnova, Dzeina Mezale, Anastasia Kostyusheva, Dmitry Kostyushev, Stefan Petkov, Philip Podschwadt, Vladimir Valuev-Elliston, Sviataslau Sasinovich, Sergey Korolev, Per Warholm, Anastasia Latanova, Elizaveta Starodubova, Amir Tukhvatulin, Oleg Latyshev, Renat Selimov, Pavel Metalnikov, Alexander Komarov, Olga Ivanova, Tatiana Gorodnicheva, Sergey Kochetkov, Marina Gottikh, Ilze Strumfa, Alexander Ivanov, Ilya Gordeychuk, Maria Isaguliants
Oxid Med Cell Longev. 2019; 2019: 6016278. Published online 2019 Dec 2. doi: 10.1155/2019/6016278
PMCID:
PMC6915010
ArticlePDF–3.7M
13.
HIV-1 Vif Triggers Cell Cycle Arrest by Degrading Cellular PPP2R5 Phospho-regulators
Daniel J. Salamango, Terumasa Ikeda, Seyed Arad Moghadasi, Jiayi Wang, Jennifer L. McCann, Artur A. Serebrenik, Diako Ebrahimi, Matthew C. Jarvis, William L. Brown, Reuben S. Harris
Cell Rep. Author manuscript; available in PMC 2019 Dec 10.
Published in final edited form as: Cell Rep. 2019 Oct 29; 29(5): 1057–1065.e4. doi: 10.1016/j.celrep.2019.09.057
PMCID:
PMC6903395
ArticlePDF–1.9M
14.
HIV-1 Envelope Glycoprotein Amino Acids Signatures Associated with Clade B Transmitted/Founder and Recent Viruses
Alexis Kafando, Christine Martineau, Mohamed El-Far, Eric Fournier, Florence Doualla-Bell, Bouchra Serhir, Adama Kazienga, Mohamed Ndongo Sangaré, Mohamed Sylla, Annie Chamberland, Hugues Charest, Cécile L. Tremblay
Viruses. 2019 Nov; 11(11): 1012. Published online 2019 Nov 1. doi: 10.3390/v11111012
PMCID:
PMC6893788
ArticlePDF–6.3M
15.
Analysis of HIV-1 diversity, primary drug resistance and transmission networks in Croatia
Maja Oroz, Josip Begovac, Ana Planinić, Filip Rokić, Maja M. Lunar, Tomaž Mark Zorec, Robert Beluzić, Petra Korać, Oliver Vugrek, Mario Poljak, Snježana Židovec Lepej
Sci Rep. 2019; 9: 17307. Published online 2019 Nov 21. doi: 10.1038/s41598-019-53520-8
PMCID:
PMC6872562
ArticlePDF–2.0M
16.
Comparison of an in-house ‘home-brew’ and commercial ViroSeq integrase genotyping assays on HIV-1 subtype C samples
Kaelo K. Seatla, Wonderful T. Choga, Mompati Mogwele, Thabo Diphoko, Dorcas Maruapula, Lucy Mupfumi, Rosemary M. Musonda, Christopher F. Rowley, Ava Avalos, Ishmael Kasvosve, Sikhulile Moyo, Simani Gaseitsiwe
PLoS One. 2019; 14(11): e0224292. Published online 2019 Nov 21. doi: 10.1371/journal.pone.0224292
PMCID:
PMC6871785
ArticlePDF–1.7M
17.
Novel gRNA design pipeline to develop broad-spectrum CRISPR/Cas9 gRNAs for safe targeting of the HIV-1 quasispecies in patients
Neil T. Sullivan, Will Dampier, Cheng-Han Chung, Alexander G. Allen, Andrew Atkins, Vanessa Pirrone, Greg Homan, Shendra Passic, Jean Williams, Wen Zhong, Katherine Kercher, Mathew Desimone, Luna Li, Gregory C. Antell, Joshua Chang Mell, Garth D. Ehrlich, Zsofia Szep, Jeffrey M. Jacobson, Michael R. Nonnemacher, Brian Wigdahl
Sci Rep. 2019; 9: 17088. Published online 2019 Nov 19. doi: 10.1038/s41598-019-52353-9
PMCID:
PMC6864089
ArticlePDF–4.2M
18.
SNAPPy: A snakemake pipeline for scalable HIV-1 subtyping by phylogenetic pairing
Pedro M M Araújo, Joana S Martins, Nuno S Osório
Virus Evol. 2019 Jul; 5(2): vez050. Published online 2019 Nov 19. doi: 10.1093/ve/vez050
PMCID:
PMC6863187
ArticlePDF–287K
19.
TREM-1 Protects HIV-1-Infected Macrophages from Apoptosis through Maintenance of Mitochondrial Function
Grant R. Campbell, Rachel K. To, Stephen A. Spector
mBio. 2019 Nov-Dec; 10(6): e02638-19. Published online 2019 Nov 12. doi: 10.1128/mBio.02638-19
PMCID:
PMC6851287
ArticlePDF–3.2M
20.
Detection of HIV transmission hotspots in British Columbia, Canada: A novel framework for the prioritization and allocation of treatment and prevention resources
Angela McLaughlin, Paul Sereda, Natalia Oliveira, Rolando Barrios, Chanson J. Brumme, Zabrina L. Brumme, Julio S.G. Montaner, Jeffrey B. Joy
EBioMedicine. 2019 Oct; 48: 405–413. Published online 2019 Oct 15. doi: 10.1016/j.ebiom.2019.09.026
PMCID:
PMC6838403
ArticlePDF–1.9M

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