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Items: 18

1.
A Fosmid-Based System for the Generation of Recombinant Cercopithecine Alphaherpesvirus 2 Encoding Reporter Genes
Ekaterina Chukhno, Sabine Gärtner, Abdul Rahman Siregar, Alexander Mehr, Marie Wende, Stoyan Petkov, Jasper Götting, Akshay Dhingra, Thomas Schulz, Stefan Pöhlmann, Michael Winkler
Viruses. 2019 Nov; 11(11): 1026. Published online 2019 Nov 5. doi: 10.3390/v11111026
PMCID:
PMC6893520
ArticlePDF–2.3M
2.
Ancient Recombination Events between Human Herpes Simplex Viruses
Sonia Burrel, David Boutolleau, Diane Ryu, Henri Agut, Kevin Merkel, Fabian H. Leendertz, Sébastien Calvignac-Spencer
Mol Biol Evol. 2017 Jul; 34(7): 1713–1721. Published online 2017 Mar 28. doi: 10.1093/molbev/msx113
PMCID:
PMC5455963
ArticlePDF–790K
3.
The Basic Domain of Herpes Simplex Virus 1 pUS9 Recruits Kinesin-1 To Facilitate Egress from Neurons
Russell J. Diefenbach, April Davis, Monica Miranda-Saksena, Marian A. Fernandez, Barbara J. Kelly, Cheryl A. Jones, Jennifer H. LaVail, Jing Xue, Joey Lai, Anthony L. Cunningham
J Virol. 2016 Feb 15; 90(4): 2102–2111. Prepublished online 2015 Dec 9. Published online 2016 Jan 28. doi: 10.1128/JVI.03041-15
PMCID:
PMC4733978
ArticlePDF–3.0M
4.
Genetic Diversity within Alphaherpesviruses: Characterization of a Novel Variant of Herpes Simplex Virus 2
Sonia Burrel, Nathalie Désiré, Julien Marlet, Laurent Dacheux, Sophie Seang, Eric Caumes, Hervé Bourhy, Henri Agut, David Boutolleau
J Virol. 2015 Dec 15; 89(24): 12273–12283. Published online 2015 Sep 23. doi: 10.1128/JVI.01959-15
PMCID:
PMC4665239
ArticlePDF–1.4M
5.
Vy-PER: eliminating false positive detection of virus integration events in next generation sequencing data
Michael Forster, Silke Szymczak, David Ellinghaus, Georg Hemmrich, Malte Rühlemann, Lars Kraemer, Sören Mucha, Lars Wienbrandt, Martin Stanulla, UFO Sequencing Consortium within the I-BFM Study Group, Andre Franke
Sci Rep. 2015; 5: 11534. Published online 2015 Jul 13. doi: 10.1038/srep11534
PMCID:
PMC4499804
ArticlePDF–589K
6.
Genome-wide prediction of vaccine targets for human herpes simplex viruses using Vaxign reverse vaccinology
Zuoshuang Xiang, Yongqun He
BMC Bioinformatics. 2013; 14(Suppl 4): S2. Published online 2013 Mar 8. doi: 10.1186/1471-2105-14-S4-S2
PMCID:
PMC3599071
ArticlePDF–1.0M
7.
Analysis of the genome of leporid herpesvirus 4
Bobby Babra, Gregory Watson, Wayne Xu, Brendan Jeffrey, Jia-Rong Xu, Dan Rockey, George Rohrmann, Ling Jin
Virology. Author manuscript; available in PMC 2013 Nov 10.
Published in final edited form as: Virology. 2012 Nov 10; 433(1): 183–191. Published online 2012 Aug 22. doi: 10.1016/j.virol.2012.08.002
PMCID:
PMC3474708
ArticlePDF–1.5M
8.
Herpes B Virus Utilizes Human Nectin-1 but Not HVEM or PILRα for Cell-Cell Fusion and Virus Entry
Qing Fan, Melanie Amen, Mallory Harden, Alberto Severini, Anthony Griffiths, Richard Longnecker
J Virol. 2012 Apr; 86(8): 4468–4476. doi: 10.1128/JVI.00041-12
PMCID:
PMC3318624
ArticlePDF–1.0M
9.
RNA binding properties of the US11 protein from four primate simplexviruses
Sarah Tohme, Cyprian D Cukier, Alberto Severini
Virol J. 2011; 8: 504. Published online 2011 Nov 3. doi: 10.1186/1743-422X-8-504
PMCID:
PMC3225334
ArticlePDF–392K
10.
UMARS: Un-MAppable Reads Solution
Sung-Chou Li, Wen-Ching Chan, Chun-Hung Lai, Kuo-Wang Tsai, Chun-Nan Hsu, Yuh-Shan Jou, Hua-Chien Chen, Chun-Hong Chen, Wen-chang Lin
BMC Bioinformatics. 2011; 12(Suppl 1): S9. Published online 2011 Feb 15. doi: 10.1186/1471-2105-12-S1-S9
PMCID:
PMC3044317
ArticlePDF–1.4M
11.
Herpesvirus systematics
Andrew J. Davison
Vet Microbiol. 2010 Jun 16; 143(1-2): 52–69. doi: 10.1016/j.vetmic.2010.02.014
PMCID:
PMC2995426
Article
12.
Identification of a novel linear B-cell epitope in the UL26 and UL26.5 proteins of Duck Enteritis Virus
Xiaoli Liu, Zongxi Han, Yuhao Shao, Dan Yu, Huixin Li, Yu Wang, Xiangang Kong, Shengwang Liu
Virol J. 2010; 7: 223. Published online 2010 Sep 13. doi: 10.1186/1743-422X-7-223
PMCID:
PMC2949831
ArticlePDF–872K
13.
Least-Squares Support Vector Machine Approach to Viral Replication Origin Prediction
Raul Cruz-Cano, David S.H. Chew, Choi Kwok-Pui, Leung Ming-Ying
INFORMS J Comput. Author manuscript; available in PMC 2011 Jun 1.
Published in final edited form as: INFORMS J Comput. 2010 Jun 1; 22(3): 457–470. doi: 10.1287/ijoc.1090.0360
PMCID:
PMC2923853
ArticlePDF–890K
14.
Whole-proteome phylogeny of large dsDNA viruses and parvoviruses through a composition vector method related to dynamical language model
Zu-Guo Yu, Ka Hou Chu, Chi Pang Li, Vo Anh, Li-Qian Zhou, Roger Wei Wang
BMC Evol Biol. 2010; 10: 192. Published online 2010 Jun 22. doi: 10.1186/1471-2148-10-192
PMCID:
PMC2898692
ArticlePDF–1.3M
15.
Stepwise Evolution of the Herpes Simplex Virus Origin Binding Protein and Origin of Replication
Monica Olsson, Ka-Wei Tang, Cecilia Persson, L. Marcus Wilhelmsson, Martin Billeter, Per Elias
J Biol Chem. 2009 Jun 12; 284(24): 16246–16255. Published online 2009 Apr 7. doi: 10.1074/jbc.M807551200
PMCID:
PMC2713539
ArticlePDF–1.5M
16.
AT excursion: a new approach to predict replication origins in viral genomes by locating AT-rich regions
David SH Chew, Ming-Ying Leung, Kwok Pui Choi
BMC Bioinformatics. 2007; 8: 163. Published online 2007 May 21. doi: 10.1186/1471-2105-8-163
PMCID:
PMC1904460
ArticlePDF–382K
17.
The Complete Genome Sequence of Herpesvirus Papio 2 (Cercopithecine Herpesvirus 16) Shows Evidence of Recombination Events among Various Progenitor Herpesviruses
Shaun D. Tyler, Alberto Severini
J Virol. 2006 Feb; 80(3): 1214–1221. doi: 10.1128/JVI.80.3.1214-1221.2006
PMCID:
PMC1346941
ArticlePDF–514K
18.
Scoring schemes of palindrome clusters for more sensitive prediction of replication origins in herpesviruses
David S. H. Chew, Kwok Pui Choi, Ming-Ying Leung
Nucleic Acids Res. 2005; 33(15): e134. Published online 2005 Sep 1. doi: 10.1093/nar/gni135
PMCID:
PMC1197138
ArticlePDF–282K

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