Full text in PMC (nucleotide) for Gene (Select 3773145) - PMC

Select item 66623361.

Signals of positive selection in mitochondrial protein‐coding genes of woolly mammoth: Adaptation to extreme environments?

Jacob Njaramba Ngatia, Tian Ming Lan, Thi Dao Dinh, Le Zhang, Ahmed Khalid Ahmed, Yan Chun Xu

Ecol Evol. 2019 Jun; 9(12): 6821–6832. Published online 2019 May 9. doi: 10.1002/ece3.5250

PMCID:: PMC6662336

Article PDF–1.1M

Select item 64118842.

Signs of biological activities of 28,000-year-old mammoth nuclei in mouse oocytes visualized by live-cell imaging

Kazuo Yamagata, Kouhei Nagai, Hiroshi Miyamoto, Masayuki Anzai, Hiromi Kato, Kei Miyamoto, Satoshi Kurosaka, Rika Azuma, Igor I. Kolodeznikov, Albert V. Protopopov, Valerii V. Plotnikov, Hisato Kobayashi, Ryouka Kawahara-Miki, Tomohiro Kono, Masao Uchida, Yasuyuki Shibata, Tetsuya Handa, Hiroshi Kimura, Yoshihiko Hosoi, Tasuku Mitani, Kazuya Matsumoto, Akira Iritani

Sci Rep. 2019; 9: 4050. Published online 2019 Mar 11. doi: 10.1038/s41598-019-40546-1

PMCID:: PMC6411884

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Select item 61627533.

Assessing Metagenomic Signals Recovered from Lyuba, a 42,000-Year-Old Permafrost-Preserved Woolly Mammoth Calf

Giada Ferrari, Heidi E. L. Lischer, Judith Neukamm, Enrique Rayo, Nicole Borel, Andreas Pospischil, Frank Rühli, Abigail S. Bouwman, Michael G. Campana

Genes (Basel) 2018 Sep; 9(9): 436. Published online 2018 Aug 31. doi: 10.3390/genes9090436

PMCID:: PMC6162753

Article PDF–2.4M

Select item 61218684.

Mitogenome evolution in the last surviving woolly mammoth population reveals neutral and functional consequences of small population size

Patrícia Pečnerová, Eleftheria Palkopoulou, Christopher W. Wheat, Pontus Skoglund, Sergey Vartanyan, Alexei Tikhonov, Pavel Nikolskiy, Johannes van der Plicht, David Díez‐del‐Molino, Love Dalén

Evol Lett. 2017 Dec; 1(6): 292–303. Published online 2017 Nov 28. doi: 10.1002/evl3.33

PMCID:: PMC6121868

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Select item 57350915.

Central European Woolly Mammoth Population Dynamics: Insights from Late Pleistocene Mitochondrial Genomes

James A. Fellows Yates, Dorothée G. Drucker, Ella Reiter, Simon Heumos, Frido Welker, Susanne C. Münzel, Piotr Wojtal, Martina Lázničková-Galetová, Nicholas J. Conard, Alexander Herbig, Hervé Bocherens, Johannes Krause

Sci Rep. 2017; 7: 17714. Published online 2017 Dec 18. doi: 10.1038/s41598-017-17723-1

PMCID:: PMC5735091

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Select item 54997426.

A new model for ancient DNA decay based on paleogenomic meta-analysis

Logan Kistler, Roselyn Ware, Oliver Smith, Matthew Collins, Robin G. Allaby

Nucleic Acids Res. 2017 Jun 20; 45(11): 6310–6320. Published online 2017 May 9. doi: 10.1093/nar/gkx361

PMCID:: PMC5499742

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Select item 54611097.

Palaeogenomes of Eurasian straight-tusked elephants challenge the current view of elephant evolution

Matthias Meyer, Eleftheria Palkopoulou, Sina Baleka, Mathias Stiller, Kirsty E H Penkman, Kurt W Alt, Yasuko Ishida, Dietrich Mania, Swapan Mallick, Tom Meijer, Harald Meller, Sarah Nagel, Birgit Nickel, Sven Ostritz, Nadin Rohland, Karol Schauer, Tim Schüler, Alfred L Roca, David Reich, Beth Shapiro, Michael Hofreiter

eLife. 2017; 6: e25413. Published online 2017 Jun 6. doi: 10.7554/eLife.25413

PMCID:: PMC5461109

Article PDF–1006K

Select item 53611128.

The evolutionary and phylogeographic history of woolly mammoths: a comprehensive mitogenomic analysis

Dan Chang, Michael Knapp, Jacob Enk, Sebastian Lippold, Martin Kircher, Adrian Lister, Ross D. E. MacPhee, Christopher Widga, Paul Czechowski, Robert Sommer, Emily Hodges, Nikolaus Stümpel, Ian Barnes, Love Dalén, Anatoly Derevianko, Mietje Germonpré, Alexandra Hillebrand-Voiculescu, Silviu Constantin, Tatyana Kuznetsova, Dick Mol, Thomas Rathgeber, Wilfried Rosendahl, Alexey N. Tikhonov, Eske Willerslev, Greg Hannon, Carles Lalueza-Fox, Ulrich Joger, Hendrik Poinar, Michael Hofreiter, Beth Shapiro

Sci Rep. 2017; 7: 44585. Published online 2017 Mar 22. doi: 10.1038/srep44585

PMCID:: PMC5361112

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Select item 52065279.

Substitutions of short heterologous DNA segments of intragenomic or extragenomic origins produce clustered genomic polymorphisms

Klaus Harms, Asbjørn Lunnan, Nils Hülter, Tobias Mourier, Lasse Vinner, Cheryl P. Andam, Pekka Marttinen, Helena Fridholm, Anders Johannes Hansen, William P. Hanage, Kaare Magne Nielsen, Eske Willerslev, Pål Jarle Johnsen

Proc Natl Acad Sci U S A. 2016 Dec 27; 113(52): 15066–15071. Published online 2016 Dec 12. doi: 10.1073/pnas.1615819114

PMCID:: PMC5206527

Article PDF–806K

Select item 474048510.

Was Frozen Mammoth or Giant Ground Sloth Served for Dinner at The Explorers Club?

Jessica R. Glass, Matt Davis, Timothy J. Walsh, Eric J. Sargis, Adalgisa Caccone

PLoS One. 2016; 11(2): e0146825. Published online 2016 Feb 3. doi: 10.1371/journal.pone.0146825

PMCID:: PMC4740485

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Select item 448874311.

Pros and cons of methylation-based enrichment methods for ancient DNA

Andaine Seguin-Orlando, Cristina Gamba, Clio Der Sarkissian, Luca Ermini, Guillaume Louvel, Eugenia Boulygina, Alexey Sokolov, Artem Nedoluzhko, Eline D. Lorenzen, Patricio Lopez, H. Gregory McDonald, Eric Scott, Alexei Tikhonov, Thomas W. Stafford,, Jr, Ahmed H. Alfarhan, Saleh A. Alquraishi, Khaled A. S. Al-Rasheid, Beth Shapiro, Eske Willerslev, Egor Prokhortchouk, Ludovic Orlando

Sci Rep. 2015; 5: 11826. Published online 2015 Jul 2. doi: 10.1038/srep11826

PMCID:: PMC4488743

Article PDF–979K

Select item 397362612.

Evidence of Positive Selection in Mitochondrial Complexes I and V of the African Elephant

Tabitha M. Finch, Nan Zhao, Dmitry Korkin, Katy H. Frederick, Lori S. Eggert

PLoS One. 2014; 9(4): e92587. Published online 2014 Apr 2. doi: 10.1371/journal.pone.0092587

PMCID:: PMC3973626

Article PDF–988K

Select item 356184713.

Recovery of cell nuclei from 15,000 years old mammoth tissues and its injection into mouse enucleated matured oocytes

Hiromi Kato, Masayuki Anzai, Tasuku Mitani, Masahiro Morita, Yui Nishiyama, Akemi Nakao, Kenji Kondo, Petr A. Lazarev, Tsuyoshi Ohtani, Yasuyuki Shibata, Akira Iritani

Proc Jpn Acad Ser B Phys Biol Sci. 2009 Jul; 85(7): 240–247. doi: 10.2183/pjab.85.240

PMCID:: PMC3561847

Article PDF–9.2M

Select item 321997314.

Complete Columbian mammoth mitogenome suggests interbreeding with woolly mammoths

Jacob Enk, Alison Devault, Regis Debruyne, Christine E King, Todd Treangen, Dennis O'Rourke, Steven L Salzberg, Daniel Fisher, Ross MacPhee, Hendrik Poinar

Genome Biol. 2011; 12(5): R51. Published online 2011 May 31. doi: 10.1186/gb-2011-12-5-r51

PMCID:: PMC3219973

Article PDF–809K

Select item 266437315.

Range-wide mtDNA phylogeography yields insights into the origins of Asian elephants

T.N.C. Vidya, Raman Sukumar, Don J. Melnick

Proc Biol Sci. 2009 Mar 7; 276(1658): 893–902. Published online 2008 Nov 18. doi: 10.1098/rspb.2008.1494

Correction in:: Proc Biol Sci. 2011 Mar 7; 278(1706): 798.

PMCID:: PMC2664373

Article PDF–1.5M

Select item 242341316.

Intraspecific phylogenetic analysis of Siberian woolly mammoths using complete mitochondrial genomes

M. Thomas P. Gilbert, Daniela I. Drautz, Arthur M. Lesk, Simon Y. W. Ho, Ji Qi, Aakrosh Ratan, Chih-Hao Hsu, Andrei Sher, Love Dalén, Anders Götherström, Lynn P. Tomsho, Snjezana Rendulic, Michael Packard, Paula F. Campos, Tatyana V. Kuznetsova, Fyodor Shidlovskiy, Alexei Tikhonov, Eske Willerslev, Paola Iacumin, Bernard Buigues, Per G. P. Ericson, Mietje Germonpré, Pavel Kosintsev, Vladimir Nikolaev, Malgosia Nowak-Kemp, James R. Knight, Gerard P. Irzyk, Clotilde S. Perbost, Karin M. Fredrikson, Timothy T. Harkins, Sharon Sheridan, Webb Miller, Stephan C. Schuster

Proc Natl Acad Sci U S A. 2008 Jun 17; 105(24): 8327–8332. Published online 2008 Jun 9. doi: 10.1073/pnas.0802315105

PMCID:: PMC2423413

Article PDF–626K

Select item 192513417.

Proboscidean Mitogenomics: Chronology and Mode of Elephant Evolution Using Mastodon as Outgroup

Nadin Rohland, Anna-Sapfo Malaspinas, Joshua L Pollack, Montgomery Slatkin, Paul Matheus, Michael Hofreiter

PLoS Biol. 2007 Aug; 5(8): e207. Published online 2007 Jul 24. doi: 10.1371/journal.pbio.0050207

PMCID:: PMC1925134

Article PDF–339K

Select item 136010118.

Complete Mitochondrial Genome and Phylogeny of Pleistocene MammothMammuthus primigenius

Evgeny I Rogaev, Yuri K Moliaka, Boris A Malyarchuk, Fyodor A Kondrashov, Miroslava V Derenko, Ilya Chumakov, Anastasia P Grigorenko

PLoS Biol. 2006 Mar; 4(3): e73. Published online 2006 Feb 7. doi: 10.1371/journal.pbio.0040073

PMCID:: PMC1360101

Article PDF–233K

Select item 136009719.

The Year of the Mammoth

Alan Cooper

PLoS Biol. 2006 Mar; 4(3): e78. Published online 2006 Feb 7. doi: 10.1371/journal.pbio.0040078

PMCID:: PMC1360097

Article PDF–64K

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