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Items: 1 to 20 of 25

1.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
ArticlePDF–2.2M
2.
HIV-1 Gag-Virus-Like Particles Induce Natural Killer Cell Immune Responses via Activation and Maturation of Dendritic Cells
Myint Oo Chang, Tomoyuki Suzuki, Hitoshi Suzuki, Hiroshi Takaku
J Innate Immun. 2012 Feb; 4(2): 187–200. Published online 2011 Jul 22. doi: 10.1159/000329226
PMCID:
PMC6741469
ArticlePDF–990K
3.
PLEKHA4/kramer Attenuates Dishevelled Ubiquitination to Modulate Wnt and Planar Cell Polarity Signaling
Adnan Shami Shah, Alex G. Batrouni, Dongsung Kim, Amith Punyala, Wendy Cao, Chun Han, Michael L. Goldberg, Marcus B. Smolka, Jeremy M. Baskin
Cell Rep. Author manuscript; available in PMC 2019 Jun 26.
Published in final edited form as: Cell Rep. 2019 May 14; 27(7): 2157–2170.e8. doi: 10.1016/j.celrep.2019.04.060
PMCID:
PMC6594551
ArticlePDF–1.4M
4.
Association of human leukocyte antigens‐DQB2/DPA1/DPB1 polymorphism and pulmonary tuberculosis in the Chinese Uygur population
Xue Wang, Xudong Cao, Wanjiang Zhang, Le Zhang, Lijun Lu, Xinyue Li, Saeed El‐Ashram, Jiangdong Wu, Chuangfu Chen
Mol Genet Genomic Med. 2019 Mar; 7(3): e544. Published online 2019 Jan 1. doi: 10.1002/mgg3.544
PMCID:
PMC6418356
ArticlePDF–420K
5.
Architecture of the human interactome defines protein communities and disease networks
Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper
Nature. Author manuscript; available in PMC 2017 Nov 17.
Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366
PMCID:
PMC5531611
ArticlePDF–2.7M
6.
The BioPlex Network: A Systematic Exploration of the Human Interactome
Edward L. Huttlin, Lily Ting, Raphael J. Bruckner, Fana Gebreab, Melanie P. Gygi, John Szpyt, Stanley Tam, Gabriela Zarraga, Greg Colby, Kurt Baltier, Rui Dong, Virginia Guarani, Laura Pontano Vaites, Alban Ordureau, Ramin Rad, Brian K. Erickson, Martin Wühr, Joel Chick, Bo Zhai, Deepak Kolippakkam, Julian Mintseris, Robert A. Obar, Tim Harris, Spyros Artavanis-Tsakonas, Mathew E. Sowa, Pietro DeCamilli, Joao A. Paulo, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2016 Jul 16.
Published in final edited form as: Cell. 2015 Jul 16; 162(2): 425–440. doi: 10.1016/j.cell.2015.06.043
PMCID:
PMC4617211
ArticlePDF–2.2M
7.
A Genome-Wide Association Study on Chronic HBV Infection and Its Clinical Progression in Male Han-Taiwanese
Su-Wei Chang, Cathy Shen-Jang Fann, Wen-Hui Su, Yu Chen Wang, Chia Chan Weng, Chia-Jung Yu, Chia-Lin Hsu, Ai-Ru Hsieh, Rong-Nan Chien, Chia-Ming Chu, Dar-In Tai
PLoS One. 2014; 9(6): e99724. Published online 2014 Jun 18. doi: 10.1371/journal.pone.0099724
PMCID:
PMC4062466
ArticlePDF–539K
8.
The activity of Nef on HIV-1 infectivity
Stéphane Basmaciogullari, Massimo Pizzato
Front Microbiol. 2014; 5: 232. Published online 2014 May 20. doi: 10.3389/fmicb.2014.00232
PMCID:
PMC4033043
ArticlePDF–1.2M
9.
Loci Associated with N-Glycosylation of Human Immunoglobulin G Show Pleiotropy with Autoimmune Diseases and Haematological Cancers
Gordan Lauc, Jennifer E. Huffman, Maja Pučić, Lina Zgaga, Barbara Adamczyk, Ana Mužinić, Mislav Novokmet, Ozren Polašek, Olga Gornik, Jasminka Krištić, Toma Keser, Veronique Vitart, Blanca Scheijen, Hae-Won Uh, Mariam Molokhia, Alan Leslie Patrick, Paul McKeigue, Ivana Kolčić, Ivan Krešimir Lukić, Olivia Swann, Frank N. van Leeuwen, L. Renee Ruhaak, Jeanine J. Houwing-Duistermaat, P. Eline Slagboom, Marian Beekman, Anton J. M. de Craen, André M. Deelder, Qiang Zeng, Wei Wang, Nicholas D. Hastie, Ulf Gyllensten, James F. Wilson, Manfred Wuhrer, Alan F. Wright, Pauline M. Rudd, Caroline Hayward, Yurii Aulchenko, Harry Campbell, Igor Rudan
PLoS Genet. 2013 Jan; 9(1): e1003225. Published online 2013 Jan 31. doi: 10.1371/journal.pgen.1003225
PMCID:
PMC3561084
ArticlePDF–1.0M
10.
Susceptibility Loci Associated with Specific and Shared Subtypes of Lymphoid Malignancies
Joseph Vijai, Tomas Kirchhoff, Kasmintan A. Schrader, Jennifer Brown, Ana Virginia Dutra-Clarke, Christopher Manschreck, Nichole Hansen, Rohini Rau-Murthy, Kara Sarrel, Jennifer Przybylo, Sohela Shah, Srujana Cheguri, Zsofia Stadler, Liying Zhang, Ora Paltiel, Dina Ben-Yehuda, Agnes Viale, Carol Portlock, David Straus, Steven M. Lipkin, Mortimer Lacher, Mark Robson, Robert J. Klein, Andrew Zelenetz, Kenneth Offit
PLoS Genet. 2013 Jan; 9(1): e1003220. Published online 2013 Jan 17. doi: 10.1371/journal.pgen.1003220
PMCID:
PMC3547842
ArticlePDF–1.4M
11.
Strategy for Identifying Dendritic Cell-Processed CD4+ T Cell Epitopes from the HIV Gag p24 Protein
Leonia Bozzacco, Haiqiang Yu, Jörn Dengjel, Christine Trumpfheller, Henry A. Zebroski, III, Nawei Zhang, Victoria Küttner, Beatrix M. Ueberheide, Haiteng Deng, Brian T. Chait, Ralph M. Steinman, Svetlana Mojsov, David Fenyö
PLoS One. 2012; 7(7): e41897. Published online 2012 Jul 30. doi: 10.1371/journal.pone.0041897
PMCID:
PMC3408443
ArticlePDF–1.4M
12.
One Protein to Rule them All: Modulation of Cell Surface Receptors and Molecules by HIV Nef
Alessia Landi, Veronica Iannucci, Anouk Van Nuffel, Pieter Meuwissen, Bruno Verhasselt
Curr HIV Res. 2011 Oct; 9(7): 496–504. Published online 2011 Oct. doi: 10.2174/157016211798842116
PMCID:
PMC3290772
ArticlePDF–247K
13.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
ArticlePDF–1.0M
14.
Misdirection of membrane trafficking by HIV-1 Vpu and Nef: Keys to viral virulence and persistence
Andrey Tokarev, John Guatelli
Cell Logist. 2011 May-Jun; 1(3): 90–102. Published online May-Jun 2011. doi: 10.4161/cl.1.3.16708
PMCID:
PMC3173656
ArticlePDF–619K
15.
Differential Genetic Associations for Systemic Lupus Erythematosus Based on Anti–dsDNA Autoantibody Production
Sharon A. Chung, Kimberly E. Taylor, Robert R. Graham, Joanne Nititham, Annette T. Lee, Ward A. Ortmann, Chaim O. Jacob, Marta E. Alarcón-Riquelme, Betty P. Tsao, John B. Harley, Patrick M. Gaffney, Kathy L. Moser, SLEGEN, Michelle Petri, F. Yesim Demirci, M. Ilyas Kamboh, Susan Manzi, Peter K. Gregersen, Carl D. Langefeld, Timothy W. Behrens, Lindsey A. Criswell
PLoS Genet. 2011 Mar; 7(3): e1001323. Published online 2011 Mar 3. doi: 10.1371/journal.pgen.1001323
PMCID:
PMC3048371
ArticlePDF–622K
16.
Differences in Self-peptide Binding between T1D-related Susceptible and Protective DR4 Subtypes
Xinhui Ge, Eddie A. James, Helena Reijonen, William W. Kwok
J Autoimmun. Author manuscript; available in PMC 2012 Mar 1.
Published in final edited form as: J Autoimmun. 2011 Mar; 36(2): 155–160. Published online 2011 Jan 22. doi: 10.1016/j.jaut.2010.12.004
PMCID:
PMC3046295
ArticlePDF–348K
17.
High-Density SNP Screening of the Major Histocompatibility Complex in Systemic Lupus Erythematosus Demonstrates Strong Evidence for Independent Susceptibility Regions
Lisa F. Barcellos, Suzanne L. May, Patricia P. Ramsay, Hong L. Quach, Julie A. Lane, Joanne Nititham, Janelle A. Noble, Kimberly E. Taylor, Diana L. Quach, Sharon A. Chung, Jennifer A. Kelly, Kathy L. Moser, Timothy W. Behrens, Michael F. Seldin, Glenys Thomson, John B. Harley, Patrick M. Gaffney, Lindsey A. Criswell
PLoS Genet. 2009 Oct; 5(10): e1000696. Published online 2009 Oct 23. doi: 10.1371/journal.pgen.1000696
PMCID:
PMC2758598
ArticlePDF–323K
18.
Human Immunodeficiency Virus Type 1 Vpu Protein Interacts with CD74 and Modulates Major Histocompatibility Complex Class II Presentation
Amjad Hussain, Clement Wesley, Mohammad Khalid, Ashutosh Chaudhry, Shahid Jameel
J Virol. 2008 Jan; 82(2): 893–902. Published online 2007 Oct 24. doi: 10.1128/JVI.01373-07
PMCID:
PMC2224584
ArticlePDF–554K
19.
Nef Proteins from Simian Immunodeficiency Virus-Infected Chimpanzees Interact with p21-Activated Kinase 2 and Modulate Cell Surface Expression of Various Human Receptors
Frank Kirchhoff, Michael Schindler, Nicola Bailer, G. Herma Renkema, Kalle Saksela, Volker Knoop, Michaela C. Müller-Trutwin, Mario L. Santiago, Frederic Bibollet-Ruche, Matthias T. Dittmar, Jonathan L. Heeney, Beatrice H. Hahn, Jan Münch
J Virol. 2004 Jul; 78(13): 6864–6874. doi: 10.1128/JVI.78.13.6864-6874.2004
PMCID:
PMC421647
ArticlePDF–1.2M
20.
Gene organization of DC and DX subregions of the human major histocompatibility complex.
K Okada, J M Boss, H Prentice, T Spies, R Mengler, C Auffray, J Lillie, D Grossberger, J L Strominger
Proc Natl Acad Sci U S A. 1985 May; 82(10): 3410–3414. doi: 10.1073/pnas.82.10.3410
PMCID:
PMC397785
SummaryPage BrowsePDF–1.3M

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