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Items: 1 to 20 of 25

1.
Mouse models for hereditary spastic paraplegia uncover a role of PI4K2A in autophagic lysosome reformation
Mukhran Khundadze, Federico Ribaudo, Adeela Hussain, Henry Stahlberg, Nahal Brocke-Ahmadinejad, Patricia Franzka, Rita-Eva Varga, Milena Zarkovic, Thanakorn Pungsrinont, Miriam Kokal, Ian G. Ganley, Christian Beetz, Marc Sylvester, Christian A. Hübner
Autophagy. 2021; 17(11): 3690–3706. Published online 2021 Mar 9. doi: 10.1080/15548627.2021.1891848
PMCID:
PMC8632344
AbstractArticlePDF–19M
2.
BraInMap elucidates the macromolecular connectivity landscape of mammalian brain
Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili
Cell Syst. Author manuscript; available in PMC 2021 Apr 22.
Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003
Correction in:
Cell Syst. 2020 Aug 26; 11(2): 208.
PMCID:
PMC7938770
AbstractArticlePDF–2.0M
3.
Type II PI4-kinases control Weibel-Palade body biogenesis and von Willebrand factor structure in human endothelial cells
Mafalda Lopes da Silva, Marie N. O'Connor, Janos Kriston-Vizi, Ian J. White, Raya Al-Shawi, J. Paul Simons, Julia Mössinger, Volker Haucke, Daniel F. Cutler
J Cell Sci. 2016 May 15; 129(10): 2096–2105. doi: 10.1242/jcs.187864
PMCID:
PMC4878995
AbstractArticle
4.
Homologous Transcription Factors DUX4 and DUX4c Associate with Cytoplasmic Proteins during Muscle Differentiation
Eugénie Ansseau, Jocelyn O. Eidahl, Céline Lancelot, Alexandra Tassin, Christel Matteotti, Cassandre Yip, Jian Liu, Baptiste Leroy, Céline Hubeau, Cécile Gerbaux, Samuel Cloet, Armelle Wauters, Sabrina Zorbo, Pierre Meyer, Isabelle Pirson, Dalila Laoudj-Chenivesse, Ruddy Wattiez, Scott Q. Harper, Alexandra Belayew, Frédérique Coppée
PLoS One. 2016; 11(1): e0146893. Published online 2016 Jan 27. doi: 10.1371/journal.pone.0146893
PMCID:
PMC4729438
AbstractArticlePDF–9.2M
5.
A conditional knockout resource for the genome–wide study of mouse gene function
William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley
Nature. Author manuscript; available in PMC 2013 Feb 14.
Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163
PMCID:
PMC3572410
AbstractArticlePDF–1.1M
6.
Differences in Health Status Affect Susceptibility and Mapping of Genetic Loci for Atherosclerosis (Fatty Streak) in Inbred Mice
Ujala Srivastava, Beverly J. Paigen, Ron Korstanje
Arterioscler Thromb Vasc Biol. Author manuscript; available in PMC 2013 Oct 1.
Published in final edited form as: Arterioscler Thromb Vasc Biol. 2012 Oct; 32(10): 2380–2386. Published online 2012 Jul 26. doi: 10.1161/ATVBAHA.112.255703
PMCID:
PMC3563286
AbstractArticlePDF–848K
7.
Phosphatidylinositol 4-kinase IIα function at endosomes is regulated by the ubiquitin ligase Itch
Julia Mössinger, Marnix Wieffer, Eberhard Krause, Christian Freund, Fabian Gerth, Michael Krauss, Volker Haucke
EMBO Rep. 2012 Dec; 13(12): 1087–1094. Published online 2012 Nov 13. doi: 10.1038/embor.2012.164
PMCID:
PMC3512407
AbstractArticlePDF–1.1M
8.
The schizophrenia susceptibility factor dysbindin and its associated complex sort cargoes from cell bodies to the synapse
Jennifer Larimore, Karine Tornieri, Pearl V. Ryder, Avanti Gokhale, Stephanie A. Zlatic, Branch Craige, Joshua D. Lee, Konrad Talbot, Jean-Francois Pare, Yoland Smith, Victor Faundez
Mol Biol Cell. 2011 Dec 15; 22(24): 4854–4867. doi: 10.1091/mbc.E11-07-0592
PMCID:
PMC3237628
AbstractArticlePDF–7.5M
9.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
10.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
11.
Loss of phosphatidylinositol 4-kinase 2α activity causes late onset degeneration of spinal cord axons
J. Paul Simons, Raya Al-Shawi, Shane Minogue, Mark G. Waugh, Claudia Wiedemann, Stylianos Evangelou, Andrzej Loesch, Talvinder S. Sihra, Rosalind King, Thomas T. Warner, J. Justin Hsuan
Proc Natl Acad Sci U S A. 2009 Jul 14; 106(28): 11535–11539. Published online 2009 Jul 6. doi: 10.1073/pnas.0903011106
PMCID:
PMC2710652
AbstractArticlePDF–1.6M
12.
Roles of BLOC-1 and Adaptor Protein-3 Complexes in Cargo Sorting to Synaptic Vesicles
Karen Newell-Litwa, Gloria Salazar, Yoland Smith, Victor Faundez
Mol Biol Cell. 2009 Mar 1; 20(5): 1441–1453. doi: 10.1091/mbc.E08-05-0456
PMCID:
PMC2649275
AbstractArticlePDF–676K
13.
Hermansky-Pudlak Syndrome Protein Complexes Associate with Phosphatidylinositol 4-Kinase Type II α in Neuronal and Non-neuronal Cells
Gloria Salazar, Stephanie Zlatic, Branch Craige, Andrew A. Peden, Jan Pohl, Victor Faundez
J Biol Chem. 2009 Jan 16; 284(3): 1790–1802. doi: 10.1074/jbc.M805991200
PMCID:
PMC2615517
AbstractArticlePDF–842K
14.
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells
Gwenn M. Hansen, Diane C. Markesich, Michael B. Burnett, Qichao Zhu, Karen M. Dionne, Lizabeth J. Richter, Richard H. Finnell, Arthur T. Sands, Brian P. Zambrowicz, Alejandro Abuin
Genome Res. 2008 Oct; 18(10): 1670–1679. doi: 10.1101/gr.078352.108
PMCID:
PMC2556270
AbstractArticlePDF–493K
15.
Integrating Genetic and Network Analysis to Characterize Genes Related to Mouse Weight
Anatole Ghazalpour, Sudheer Doss, Bin Zhang, Susanna Wang, Christopher Plaisier, Ruth Castellanos, Alec Brozell, Eric E Schadt, Thomas A Drake, Aldons J Lusis, Steve Horvath
PLoS Genet. 2006 Aug; 2(8): e130. Prepublished online 2006 Jun 30. Published online 2006 Aug 18. doi: 10.1371/journal.pgen.0020130
PMCID:
PMC1550283
AbstractArticlePDF–416K
16.
Phosphatidylinositol-4-Kinase Type II α Is a Component of Adaptor Protein-3-derived Vesicles
Gloria Salazar, Branch Craige, Bruce H. Wainer, Jun Guo, Pietro De Camilli, Victor Faundez
Mol Biol Cell. 2005 Aug; 16(8): 3692–3704. doi: 10.1091/mbc.E05-01-0020
PMCID:
PMC1182308
AbstractArticlePDF–841K
17.
Searching QTL by gene expression: analysis of diabesity
Aaron C Brown, William I Olver, Charles J Donnelly, Marjorie E May, Jürgen K Naggert, Daniel J Shaffer, Derry C Roopenian
BMC Genet. 2005; 6: 12. Published online 2005 Mar 10. doi: 10.1186/1471-2156-6-12
PMCID:
PMC555939
AbstractArticlePDF–414K
18.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
19.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M
20.
GenePaint.org: an atlas of gene expression patterns in the mouse embryo
Axel Visel, Christina Thaller, Gregor Eichele
Nucleic Acids Res. 2004 Jan 1; 32(Database issue): D552–D556. doi: 10.1093/nar/gkh029
PMCID:
PMC308763
AbstractArticlePDF–253K

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