PMC Links for GEO Profiles (Select 64579118) - PMC

Guimei Cui, Zhuoran Gao, Shiehong Chang, Nitin Narwade, Yitian Chen, Barun Poudel, Kate M. K. Lei, Weibo Zhang, Gang Li, Terence C. W. Poon, Edwin Cheung

Int J Biol Sci. 2022; 18(11): 4316–4328. Published online 2022 Jul 4. doi: 10.7150/ijbs.69466

PMCID:: PMC9295074

Abstract Article PDF–2.7M

Select item 92792854.

Scalable multiplex co-fractionation/mass spectrometry platform for accelerated protein interactome discovery

Pierre C. Havugimana, Raghuveera Kumar Goel, Sadhna Phanse, Ahmed Youssef, Dzmitry Padhorny, Sergei Kotelnikov, Dima Kozakov, Andrew Emili

Nat Commun. 2022; 13: 4043. Published online 2022 Jul 13. doi: 10.1038/s41467-022-31809-z

PMCID:: PMC9279285

Abstract Article PDF–2.5M

Select item 83539185.

Fucosyltransferase 8 regulation and breast cancer suppression by transcription factor activator protein 2γ

Minxing Ma, Dong Guo, Zengqi Tan, Jun Du, Feng Guan, Xiang Li

Cancer Sci. 2021 Aug; 112(8): 3190–3204. Published online 2021 Jun 12. doi: 10.1111/cas.14987

PMCID:: PMC8353918

Abstract Article PDF–3.4M

Select item 83529646.

Integrative oncogene-dependency mapping identifies RIT1 vulnerabilities and synergies in lung cancer

Athea Vichas, Amanda K. Riley, Naomi T. Nkinsi, Shriya Kamlapurkar, Phoebe C. R. Parrish, April Lo, Fujiko Duke, Jennifer Chen, Iris Fung, Jacqueline Watson, Matthew Rees, Austin M. Gabel, James D. Thomas, Robert K. Bradley, John K. Lee, Emily M. Hatch, Marina K. Baine, Natasha Rekhtman, Marc Ladanyi, Federica Piccioni, Alice H. Berger

Nat Commun. 2021; 12: 4789. Published online 2021 Aug 9. doi: 10.1038/s41467-021-24841-y

PMCID:: PMC8352964

Abstract Article PDF–4.5M

Select item 81650307.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 80247228.

Interaction of transcription factor AP‐2 gamma with proto‐oncogene PELP1 promotes tumorigenesis by enhancing RET signaling

Junhao Liu, Zexuan Liu, Mengxing Li, Weiwei Tang, Uday P. Pratap, Yiliao Luo, Kristin A. Altwegg, Xiaonan Li, Yi Zou, Hong Zhu, Gangadhara R. Sareddy, Suryavathi Viswanadhapalli, Ratna K. Vadlamudi

Mol Oncol. 2021 Apr; 15(4): 1146–1161. Published online 2021 Feb 9. doi: 10.1002/1878-0261.12871

Correction in:: Mol Oncol. 2022 Jan; 16(1): 307.

PMCID:: PMC8024722

Abstract Article PDF–2.5M

Select item 80090489.

Impact of cytosine methylation on DNA binding specificities of human transcription factors

Yimeng Yin, Ekaterina Morgunova, Arttu Jolma, Eevi Kaasinen, Biswajyoti Sahu, Syed Khund-Sayeed, Pratyush K. Das, Teemu Kivioja, Kashyap Dave, Fan Zhong, Kazuhiro R. Nitta, Minna Taipale, Alexander Popov, Paul A. Ginno, Silvia Domcke, Jian Yan, Dirk Schübeler, Charles Vinson, Jussi Taipale

Science. Author manuscript; available in PMC 2021 Mar 30.

Published in final edited form as: Science. 2017 May 5; 356(6337): eaaj2239. doi: 10.1126/science.aaj2239

PMCID:: PMC8009048

Abstract Article PDF–2.6M

Select item 797970510.

Acetylation of ELF5 suppresses breast cancer progression by promoting its degradation and targeting CCND1

Xiahui Li, Shujing Li, Bowen Li, Yanan Li, Sattout Aman, Kangkai Xia, Yuxi Yang, Bashir Ahmad, Huijian Wu

NPJ Precis Oncol. 2021; 5: 20. Published online 2021 Mar 19. doi: 10.1038/s41698-021-00158-3

PMCID:: PMC7979705

Abstract Article PDF–6.8M

Select item 791864411.

GATA transcription factors, SOX17 and TFAP2C, drive the human germ-cell specification program

Yoji Kojima, Chika Yamashiro, Yusuke Murase, Yukihiro Yabuta, Ikuhiro Okamoto, Chizuru Iwatani, Hideaki Tsuchiya, Masataka Nakaya, Tomoyuki Tsukiyama, Tomonori Nakamura, Takuya Yamamoto, Mitinori Saitou

Life Sci Alliance. 2021 May; 4(5): e202000974. Published online 2021 Feb 19. doi: 10.26508/lsa.202000974

PMCID:: PMC7918644

Abstract Article PDF–4.6M

Select item 767810012.

Functional genomics of AP-2α and AP-2γ in cancers: in silico study

Damian Kołat, Żaneta Kałuzińska, Magdalena Orzechowska, Andrzej K. Bednarek, Elżbieta Płuciennik

BMC Med Genomics. 2020; 13: 174. Published online 2020 Nov 19. doi: 10.1186/s12920-020-00823-9

PMCID:: PMC7678100

Abstract Article PDF–7.2M

Select item 757626613.

METTL3 potentiates resistance to cisplatin through m⁶A modification of TFAP2C in seminoma

Jingchao Wei, Yinghao Yin, Jun Zhou, Hanfei Chen, Jingxuan Peng, Jianfu Yang, Yuxin Tang

J Cell Mol Med. 2020 Oct; 24(19): 11366–11380. Published online 2020 Aug 28. doi: 10.1111/jcmm.15738

PMCID:: PMC7576266

Abstract Article PDF–1.8M

Select item 756688114.

Systematic mapping of genetic interactions for de novo fatty acid synthesis identifies C12orf49 as a regulator of lipid metabolism

Michael Aregger, Keith A. Lawson, Maximillian Billmann, Michael Costanzo, Amy H. Y. Tong, Katherine Chan, Mahfuzur Rahman, Kevin R. Brown, Catherine Ross, Matej Usaj, Lucy Nedyalkova, Olga Sizova, Andrea Habsid, Judy Pawling, Zhen-Yuan Lin, Hala Abdouni, Cassandra J. Wong, Alexander Weiss, Patricia Mero, James W. Dennis, Anne-Claude Gingras, Chad L. Myers, Brenda J. Andrews, Charles Boone, Jason Moffat

Nat Metab. Author manuscript; available in PMC 2020 Dec 1.

Published in final edited form as: Nat Metab. 2020 Jun; 2(6): 499–513. Published online 2020 Jun 1. doi: 10.1038/s42255-020-0211-z

PMCID:: PMC7566881

Abstract Article PDF–4.8M

Select item 730600515.

Synthetic lethal and resistance interactions with BET bromodomain inhibitors in triple-negative breast cancer

Shaokun Shu, Hua-Jun Wu, Jennifer Y. Ge, Rhamy Zeid, Isaac S. Harris, Bojana Jovanović, Katherine Murphy, Binbin Wang, Xintao Qiu, Jennifer E. Endress, Jaime Reyes, Klothilda Lim, Alba Font-Tello, Sudeepa Syamala, Tengfei Xiao, Chandra Sekhar Reddy Chilamakuri, Evangelia K. Papachristou, Clive D’Santos, Jayati Anand, Kunihiko Hinohara, Wei Li, Thomas O. McDonald, Adrienne Luoma, Rebecca J. Modiste, Quang-De Nguyen, Brittany Michel, Paloma Cejas, Cigall Kadoch, Jacob D. Jaffe, Kai W. Wucherpfennig, Jun Qi, X. Shirley Liu, Henry Long, Myles Brown, Jason S. Carroll, Joan S. Brugge, James Bradner, Franziska Michor, Kornelia Polyak

Mol Cell. Author manuscript; available in PMC 2021 Jun 18.

Published in final edited form as: Mol Cell. 2020 Jun 18; 78(6): 1096–1113.e8. Published online 2020 May 15. doi: 10.1016/j.molcel.2020.04.027

PMCID:: PMC7306005

Abstract Article PDF–3.2M

Select item 713595616.

TFAP2C- and p63-Dependent Networks Sequentially Rearrange Chromatin Landscapes to Drive Human Epidermal Lineage Commitment

Lingjie Li, Yong Wang, Jessica L. Torkelson, Gautam Shankar, Jillian M. Pattison, Hanson H. Zhen, Fengqin Fang, Zhana Duren, Jingxue Xin, Sadhana Gaddam, Sandra P. Melo, Samantha N. Piekos, Jiang Li, Eric J. Liaw, Lang Chen, Rui Li, Marius Wernig, Wing H. Wong, Howard Y. Chang, Anthony E. Oro

Cell Stem Cell. Author manuscript; available in PMC 2020 Apr 6.

Published in final edited form as: Cell Stem Cell. 2019 Feb 7; 24(2): 271–284.e8. Published online 2019 Jan 24. doi: 10.1016/j.stem.2018.12.012

PMCID:: PMC7135956

Abstract Article PDF–4.1M

Select item 711664517.

Endogenous purification reveals GREB1 as a key Estrogen Receptor regulatory factor

Hisham Mohammed, Clive D’Santos, Aurelien A. Serandour, H. Raza Ali, Gordon. D. Brown, Alan Atkins, Oscar M. Rueda, Kelly A Holmes, Vasiliki Theodorou, Jessica L. L. Robinson, Wilbert Zwart, Amel Saadi, Caryn S. Ross-Innes, Suet-Feung Chin, Suraj Menon, John Stingl, Carlo Palmieri, Carlos Caldas, Jason S. Carroll

Cell Rep. Author manuscript; available in PMC 2021 Jan 29.

Published in final edited form as: Cell Rep. 2013 Feb 21; 3(2): 342–9. Published online 2013 Feb 9. doi: 10.1016/j.celrep.2013.01.010

PMCID:: PMC7116645

Abstract Article PDF–1.5M

Select item 698921618.

Extracellular matrix anisotropy is determined by TFAP2C-dependent regulation of cell collisions

Danielle Park, Esther Wershof, Stefan Boeing, Anna Labernadie, Robert P Jenkins, Samantha George, Xavier Trepat, Paul A Bates, Erik Sahai

Nat Mater. Author manuscript; available in PMC 2020 Apr 28.

Published in final edited form as: Nat Mater. 2020 Feb; 19(2): 227–238. Published online 2019 Oct 28. doi: 10.1038/s41563-019-0504-3

PMCID:: PMC6989216

Abstract Article PDF–4.2M

Select item 694220519.

A TFAP2C Gene Signature is Predictive of Outcome in HER2-positive Breast Cancer

Vincent T. Wu, Boris Kiriazov, Kelsey E. Koch, Vivian W. Gu, Anna C. Beck, Nicholas Borcherding, Tiandao Li, Peter Addo, Zachary J. Wehrspan, Weizhou Zhang, Terry A. Braun, Bartley J. Brown, Vimla Band, Hamid Band, Mikhail V. Kulak, Ronald J. Weigel

Mol Cancer Res. Author manuscript; available in PMC 2020 Jul 1.

Published in final edited form as: Mol Cancer Res. 2020 Jan; 18(1): 46–56. Published online 2019 Oct 16. doi: 10.1158/1541-7786.MCR-19-0359

PMCID:: PMC6942205

Abstract Article PDF–1.6M

Select item 674682220.

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei

Giovanni Nassa, Giorgio Giurato, Annamaria Salvati, Valerio Gigantino, Giovanni Pecoraro, Jessica Lamberti, Francesca Rizzo, Tuula A. Nyman, Roberta Tarallo, Alessandro Weisz

Sci Data. 2019; 6: 173. Published online 2019 Sep 16. doi: 10.1038/s41597-019-0179-2

PMCID:: PMC6746822

Abstract Article PDF–2.0M

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