PMC Links for GEO Profiles (Select 74282523) - PMC

Select item 63612311.

TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations

Haiming Tang, Robert D Finn, Paul D Thomas

Bioinformatics. 2019 Feb 1; 35(3): 518–520. Published online 2018 Jul 19. doi: 10.1093/bioinformatics/bty625

PMCID:: PMC6361231

Select item 32704752.

Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation

Sarah Burge, Elizabeth Kelly, David Lonsdale, Prudence Mutowo-Muellenet, Craig McAnulla, Alex Mitchell, Amaia Sangrador-Vegas, Siew-Yit Yong, Nicola Mulder, Sarah Hunter

Database (Oxford) 2012; 2012: bar068. Published online 2012 Feb 1. doi: 10.1093/database/bar068

PMCID:: PMC3270475

Abstract Article PDF–361K

Select item 26889333.

A whole-genome assembly of the domestic cow, Bos taurus

Aleksey V Zimin, Arthur L Delcher, Liliana Florea, David R Kelley, Michael C Schatz, Daniela Puiu, Finnian Hanrahan, Geo Pertea, Curtis P Van Tassell, Tad S Sonstegard, Guillaume Marçais, Michael Roberts, Poorani Subramanian, James A Yorke, Steven L Salzberg

Genome Biol. 2009; 10(4): R42. Published online 2009 Apr 24. doi: 10.1186/gb-2009-10-4-r42

PMCID:: PMC2688933

Abstract Article PDF–454K

Select item 16366504.

A second generation radiation hybrid map to aid the assembly of the bovine genome sequence

Oliver C Jann, Jan Aerts, Michelle Jones, Nicola Hastings, Andy Law, Stephanie McKay, Elisa Marques, Aparna Prasad, Jody Yu, Stephen S Moore, Sandrine Floriot, Marie-Françoise Mahé, André Eggen, Licia Silveri, Riccardo Negrini, Elisabetta Milanesi, Paolo Ajmone-Marsan, Alessio Valentini, Cinzia Marchitelli, Maria C Savarese, Michal Janitz, Ralf Herwig, Steffen Hennig, Chiara Gorni, Erin E Connor, Tad S Sonstegard, Timothy Smith, Cord Drögemüller, John L Williams

BMC Genomics. 2006; 7: 283. Published online 2006 Nov 6. doi: 10.1186/1471-2164-7-283

PMCID:: PMC1636650

Abstract Article PDF–446K

Select item 13149005.

Characterization of 954 bovine full-CDS cDNA sequences

Gregory P Harhay, Tad S Sonstegard, John W Keele, Michael P Heaton, Michael L Clawson, Warren M Snelling, Ralph T Wiedmann, Curt P Van Tassell, Timothy PL Smith

BMC Genomics. 2005; 6: 166. Published online 2005 Nov 23. doi: 10.1186/1471-2164-6-166

PMCID:: PMC1314900

Abstract Article PDF–499K

Select item 3110586.

Sequence Evaluation of Four Pooled-Tissue Normalized Bovine cDNA Libraries and Construction of a Gene Index for Cattle

Timothy P.L. Smith, William M. Grosse, Brad A. Freking, Andrew J. Roberts, Roger T. Stone, Eduardo Casas, James E. Wray, Joseph White, Jennifer Cho, Scott C. Fahrenkrug, Gary L. Bennett, Michael P. Heaton, William W. Laegreid, Gary A. Rohrer, Carol G. Chitko-McKown, Geo Pertea, Ingeborg Holt, Svetlana Karamycheva, Feng Liang, John Quackenbush, John W. Keele

Genome Res. 2001 Apr; 11(4): 626–630. doi: 10.1101/gr.170101

PMCID:: PMC311058

Abstract Article PDF–646K

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