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Select item 106629651.

Lung Cancer

Roy S. Herbst, John V. Heymach, Scott M. Lippman

N Engl J Med. Author manuscript; available in PMC 2023 Nov 21.

Published in final edited form as: N Engl J Med. 2008 Sep 25; 359(13): 1367–1380. doi: 10.1056/NEJMra0802714

PMCID:: PMC10662965

Article PDF–1.3M

Select item 46360502.

Spatial and temporal diversity in genomic instability processes defines lung cancer evolution

Elza C. de Bruin, Nicholas McGranahan, Richard Mitter, Max Salm, David C. Wedge, Lucy Yates, Mariam Jamal-Hanjani, Seema Shafi, Nirupa Murugaesu, Andrew J. Rowan, Eva Grönroos, Madiha A. Muhammad, Stuart Horswell, Marco Gerlinger, Ignacio Varela, David Jones, John Marshall, Thierry Voet, Peter Van Loo, Doris M. Rassl, Robert C. Rintoul, Sam M. Janes, Siow-Ming Lee, Martin Forster, Tanya Ahmad, David Lawrence, Mary Falzon, Arrigo Capitanio, Timothy T. Harkins, Clarence C. Lee, Warren Tom, Enock Teefe, Shann-Ching Chen, Sharmin Begum, Adam Rabinowitz, Benjamin Phillimore, Bradley Spencer-Dene, Gordon Stamp, Zoltan Szallasi, Nik Matthews, Aengus Stewart, Peter Campbell, Charles Swanton

Science. Author manuscript; available in PMC 2015 Nov 6.

Published in final edited form as: Science. 2014 Oct 10; 346(6206): 251–256. doi: 10.1126/science.1253462

PMCID:: PMC4636050

Article PDF–1.4M

Select item 43548583.

Intra-tumor Heterogeneity in Localized Lung Adenocarcinomas Delineated by Multi-region Sequencing

Jianjun Zhang, Junya Fujimoto, Jianhua Zhang, David C. Wedge, Xingzhi Song, Jiexin Zhang, Sahil Seth, Chi-Wan Chow, Yu Cao, Curtis Gumbs, Kathryn A. Gold, Neda Kalhor, Latasha Little, Harshad Mahadeshwar, Cesar Moran, Alexei Protopopov, Huandong Sun, Jiabin Tang, Xifeng Wu, Yuanqing Ye, William N. William, Jack J. Lee, John V. Heymach, Waun Ki Hong, Stephen Swisher, Ignacio I. Wistuba, P. Andrew Futreal

Science. Author manuscript; available in PMC 2015 Oct 10.

Published in final edited form as: Science. 2014 Oct 10; 346(6206): 256–259. doi: 10.1126/science.1256930

PMCID:: PMC4354858

Article PDF–191K

Select item 42314814.

Comprehensive molecular profiling of lung adenocarcinoma

The Cancer Genome Atlas Research Network

Nature. Author manuscript; available in PMC 2014 Nov 14.

Published in final edited form as: Nature. 2014 Jul 31; 511(7511): 543–550. Published online 2014 Jul 9. doi: 10.1038/nature13385

PMCID:: PMC4231481

Article PDF–1.3M

Select item 36256445.

Multiple dose-dependent roles for Sox2 in the patterning and differentiation of anterior foregut endoderm

Jianwen Que, Tadashi Okubo, James R. Goldenring, Ki-Taek Nam, Reiko Kurotani, Edward E. Morrisey, Olena Taranova, Larysa H. Pevny, Brigid L. M. Hogan

Development. Author manuscript; available in PMC 2013 Apr 14.

Published in final edited form as: Development. 2007 Jul; 134(13): 2521–2531. Published online 2007 May 23. doi: 10.1242/dev.003855

PMCID:: PMC3625644

Article PDF–3.0M

Select item 35514716.

Detection of Mutations in EGFR in Circulating Lung-Cancer Cells

Shyamala Maheswaran, Lecia V. Sequist, Sunitha Nagrath, Lindsey Ulkus, Brian Brannigan, Chey V. Collura, Elizabeth Inserra, Sven Diederichs, A. John Iafrate, Daphne W. Bell, Subba Digumarthy, Alona Muzikansky, Daniel Irimia, Jeffrey Settleman, Ronald G. Tompkins, Thomas J. Lynch, Mehmet Toner, Daniel A. Haber

N Engl J Med. Author manuscript; available in PMC 2013 Jan 22.

Published in final edited form as: N Engl J Med. 2008 Jul 24; 359(4): 366–377. Published online 2008 Jul 2. doi: 10.1056/NEJMoa0800668

PMCID:: PMC3551471

Article PDF–1013K

Select item 35416757.

FAS and NF-κB signalling modulate dependence of lung cancers on mutant EGFR

Trever G. Bivona, Haley Hieronymus, Joel Parker, Kenneth Chang, Miquel Taron, Rafael Rosell, Philicia Moonsamy, Kimberly Dahlman, Vincent A. Miller, Carlota Costa, Gregory Hannon, Charles L. Sawyers

Nature. Author manuscript; available in PMC 2013 Jan 10.

Published in final edited form as: Nature. 2011 Mar 24; 471(7339): 523–526. doi: 10.1038/nature09870

PMCID:: PMC3541675

Article PDF–1.4M

Select item 34661138.

Comprehensive genomic characterization of squamous cell lung cancers

The Cancer Genome Atlas Research Network

Nature. Author manuscript; available in PMC 2013 Mar 27.

Published in final edited form as: Nature. 2012 Sep 27; 489(7417): 519–525. Published online 2012 Sep 9. doi: 10.1038/nature11404

Correction in:: volume 491 on page 288

PMCID:: PMC3466113

Article PDF–1.2M

Select item 34155379.

A Functional Copy-Number Variation in MAPKAPK2 Predicts Risk and Prognosis of Lung Cancer

Bin Liu, Lei Yang, Binfang Huang, Mei Cheng, Hui Wang, Yinyan Li, Dongsheng Huang, Jian Zheng, Qingchu Li, Xin Zhang, Weidong Ji, Yifeng Zhou, Jiachun Lu

Am J Hum Genet. 2012 Aug 10; 91(2): 384–390. doi: 10.1016/j.ajhg.2012.07.003

PMCID:: PMC3415537

Article PDF–284K

Select item 340857710.

Activation of the AXL Kinase Causes Resistance to EGFR-Targeted Therapy in Lung Cancer

Zhenfeng Zhang, Jae Cheol Lee, Luping Lin, Victor Olivas, Valerie Au, Thomas LaFramboise, Mohamed Abdel-Rahman, Xiaoqi Wang, Alan D. Levine, Jin Kyung Rho, Yun Jung Choi, Chang-Min Choi, Sang-We Kim, Se Jin Jang, Young Soo Park, Woo Sung Kim, Dae Ho Lee, Jung-Shin Lee, Vincent A. Miller, Maria Arcila, Marc Ladanyi, Philicia Moonsamy, Charles Sawyers, Titus J. Boggon, Patrick C. Ma, Carlota Costa, Miquel Taron, Rafael Rosell, Balazs Halmos, Trever G. Bivona

Nat Genet. Author manuscript; available in PMC 2013 Feb 1.

Published in final edited form as: Nat Genet. 2012 Aug; 44(8): 852–860. Published online 2012 Jul 1. doi: 10.1038/ng.2330

PMCID:: PMC3408577

Article PDF–957K

Select item 308877811.

Suppression of Lung Adenocarcinoma Progression by Nkx2-1

Monte M. Winslow, Talya L. Dayton, Roel G. W. Verhaak, Caroline Kim-Kiselak, Eric L. Snyder, David M. Feldser, Diana D. Hubbard, Michel J. DuPage, Charles A. Whittaker, Sebastian Hoersch, Stephanie Yoon, Denise Crowley, Roderick T. Bronson, Derek Y. Chiang, Matthew Meyerson, Tyler Jacks

Nature. Author manuscript; available in PMC 2011 Nov 5.

Published in final edited form as: Nature. 2011 May 5; 473(7345): 101–104. Published online 2011 Apr 6. doi: 10.1038/nature09881

PMCID:: PMC3088778

Article PDF–1.3M

Select item 295644312.

Identification of DOK family genes as lung tumor suppressors

Alice H. Berger, Masaru Niki, Alessandro Morotti, Barry S. Taylor, Nicholas D. Socci, Agnes Viale, Cameron Brennan, Janos Szoke, Noriko Motoi, Paul B. Rothman, Julie Teruya-Feldstein, William L. Gerald, Marc Ladanyi, Pier Paolo Pandolfi

Nat Genet. Author manuscript; available in PMC 2010 Oct 18.

Published in final edited form as: Nat Genet. 2010 Mar; 42(3): 216–223. Published online 2010 Feb 7. doi: 10.1038/ng.527

PMCID:: PMC2956443

Article PDF–3.5M

Select item 278377513.

SOX2 Is an Amplified Lineage Survival Oncogene in Lung and Esophageal Squamous Cell Carcinomas

Adam J. Bass, Hideo Watanabe, Craig H. Mermel, Soyoung Yu, Sven Perner, Roel G. Verhaak, So Young Kim, Leslie Wardwell, Pablo Tamayo, Irit Gat-Viks, Alex H. Ramos, Michele S. Woo, Barbara A. Weir, Gad Getz, Rameen Beroukhim, Michael O’Kelly, Amit Dutt, Orit Rozenblatt-Rosen, Piotr Dziunycz, Justin Komisarof, Lucian R. Chirieac, Christopher J. LaFargue, Veit Scheble, Theresia Wilbertz, Changqing Ma, Shilpa Rao, Hiroshi Nakagawa, Douglas B. Stairs, Lin Lin, Thomas J. Giordano, Patrick Wagner, John D. Minna, Adi F. Gazdar, Chang Qi Zhu, Marcia S. Brose, Ivan Cecconello, Ulysses Ribeiro, Jr., Suely K. Marie, Olav Dahl, Ramesh A. Shivdasani, Ming-Sound Tsao, Mark A. Rubin, Kwok K. Wong, Aviv Regev, William C. Hahn, David G. Beer, Anil K. Rustgi, Matthew Meyerson

Nat Genet. Author manuscript; available in PMC 2010 May 1.

Published in final edited form as: Nat Genet. 2009 Nov; 41(11): 1238–1242. Published online 2009 Oct 4. doi: 10.1038/ng.465

PMCID:: PMC2783775

Article PDF–660K

Select item 269441214.

Somatic mutations affect key pathways in lung adenocarcinoma

Li Ding, Gad Getz, David A. Wheeler, Elaine R. Mardis, Michael D. McLellan, Kristian Cibulskis, Carrie Sougnez, Heidi Greulich, Donna M. Muzny, Margaret B. Morgan, Lucinda Fulton, Robert S. Fulton, Qunyuan Zhang, Michael C. Wendl, Michael S. Lawrence, David E. Larson, Ken Chen, David J. Dooling, Aniko Sabo, Alicia C. Hawes, Hua Shen, Shalini N. Jhangiani, Lora R. Lewis, Otis Hall, Yiming Zhu, Tittu Mathew, Yanru Ren, Jiqiang Yao, Steven E. Scherer, Kerstin Clerc, Ginger A. Metcalf, Brian Ng, Aleksandar Milosavljevic, Manuel L. Gonzalez-Garay, John R. Osborne, Rick Meyer, Xiaoqi Shi, Yuzhu Tang, Daniel C. Koboldt, Ling Lin, Rachel Abbott, Tracie L. Miner, Craig Pohl, Ginger Fewell, Carrie Haipek, Heather Schmidt, Brian H. Dunford-Shore, Aldi Kraja, Seth D. Crosby, Christopher S. Sawyer, Tammi Vickery, Sacha Sander, Jody Robinson, Wendy Winckler, Jennifer Baldwin, Lucian R. Chirieac, Amit Dutt, Tim Fennell, Megan Hanna, Bruce E. Johnson, Robert C. Onofrio, Roman K. Thomas, Giovanni Tonon, Barbara A. Weir, Xiaojun Zhao, Liuda Ziaugra, Michael C. Zody, Thomas Giordano, Mark B. Orringer, Jack A. Roth, Margaret R. Spitz, Ignacio I. Wistuba, Bradley Ozenberger, Peter J. Good, Andrew C. Chang, David G. Beer, Mark A. Watson, Marc Ladanyi, Stephen Broderick, Akihiko Yoshizawa, William D. Travis, William Pao, Michael A. Province, George M. Weinstock, Harold E. Varmus, Stacey B. Gabriel, Eric S. Lander, Richard A. Gibbs, Matthew Meyerson, Richard K. Wilson

Nature. Author manuscript; available in PMC 2009 Jun 10.

Published in final edited form as: Nature. 2008 Oct 23; 455(7216): 1069–1075. doi: 10.1038/nature07423

PMCID:: PMC2694412

Article PDF–902K

Select item 268011215.

Multiple roles for Sox2 in the developing and adult mouse trachea

Jianwen Que, Xiaoyan Luo, Robert J. Schwartz, Brigid L. M. Hogan

Development. 2009 Jun 1; 136(11): 1899–1907. Published online 2009 Apr 29. doi: 10.1242/dev.034629

PMCID:: PMC2680112

Article

Select item 266805016.

Genetic Defects in Surfactant Protein A2 Are Associated with Pulmonary Fibrosis and Lung Cancer

Yongyu Wang, Phillip J. Kuan, Chao Xing, Jennifer T. Cronkhite, Fernando Torres, Randall L. Rosenblatt, J. Michael DiMaio, Lisa N. Kinch, Nick V. Grishin, Christine Kim Garcia

Am J Hum Genet. 2009 Jan 9; 84(1): 52–59. doi: 10.1016/j.ajhg.2008.11.010

PMCID:: PMC2668050

Article PDF–692K

Select item 253868317.

Characterizing the cancer genome in lung adenocarcinoma

Barbara A. Weir, Michele S. Woo, Gad Getz, Sven Perner, Li Ding, Rameen Beroukhim, William M. Lin, Michael A. Province, Aldi Kraja, Laura A. Johnson, Kinjal Shah, Mitsuo Sato, Roman K. Thomas, Justine A. Barletta, Ingrid B. Borecki, Stephen Broderick, Andrew C. Chang, Derek Y. Chiang, Lucian R. Chirieac, Jeonghee Cho, Yoshitaka Fujii, Adi F. Gazdar, Thomas Giordano, Heidi Greulich, Megan Hanna, Bruce E. Johnson, Mark G. Kris, Alex Lash, Ling Lin, Neal Lindeman, Elaine R. Mardis, John D. McPherson, John D. Minna, Margaret B. Morgan, Mark Nadel, Mark B. Orringer, John R. Osborne, Brad Ozenberger, Alex H. Ramos, James Robinson, Jack A. Roth, Valerie Rusch, Hidefumi Sasaki, Frances Shepherd, Carrie Sougnez, Margaret R. Spitz, Ming-Sound Tsao, David Twomey, Roel G. W. Verhaak, George M. Weinstock, David A. Wheeler, Wendy Winckler, Akihiko Yoshizawa, Soyoung Yu, Maureen F. Zakowski, Qunyuan Zhang, David G. Beer, Ignacio I. Wistuba, Mark A. Watson, Levi A. Garraway, Marc Ladanyi, William D. Travis, William Pao, Mark A. Rubin, Stacey B. Gabriel, Richard A. Gibbs, Harold E. Varmus, Richard K. Wilson, Eric S. Lander, Matthew Meyerson

Nature. Author manuscript; available in PMC 2008 Sep 17.

Published in final edited form as: Nature. 2007 Dec 6; 450(7171): 893–898. Published online 2007 Nov 4. doi: 10.1038/nature06358

PMCID:: PMC2538683

Article PDF–2.7M

Select item 173606718.

Functional polymorphisms in cell death pathway genes FAS and FASL contribute to risk of lung cancer

X Zhang, X Miao, T Sun, W Tan, S Qu, P Xiong, Y Zhou, D Lin

J Med Genet. 2005 Jun; 42(6): 479–484. doi: 10.1136/jmg.2004.030106

PMCID:: PMC1736067

Summary PDF–92K

Select item 118202419.

A Major Lung Cancer Susceptibility Locus Maps to Chromosome 6q23–25

J. E. Bailey-Wilson, C. I. Amos, S. M. Pinney, G. M. Petersen, M. de Andrade, J. S. Wiest, P. Fain, A. G. Schwartz, M. You, W. Franklin, C. Klein, A. Gazdar, H. Rothschild, D. Mandal, T. Coons, J. Slusser, J. Lee, C. Gaba, E. Kupert, A. Perez, X. Zhou, D. Zeng, Q. Liu, Q. Zhang, D. Seminara, J. Minna, M. W. Anderson

Am J Hum Genet. 2004 Sep; 75(3): 460–474. Published online 2004 Jul 21. doi: 10.1086/423857

PMCID:: PMC1182024

Article PDF–282K

Select item 51652820.

EGF receptor gene mutations are common in lung cancers from “never smokers” and are associated with sensitivity of tumors to gefitinib and erlotinib

William Pao, Vincent Miller, Maureen Zakowski, Jennifer Doherty, Katerina Politi, Inderpal Sarkaria, Bhuvanesh Singh, Robert Heelan, Valerie Rusch, Lucinda Fulton, Elaine Mardis, Doris Kupfer, Richard Wilson, Mark Kris, Harold Varmus

Proc Natl Acad Sci U S A. 2004 Sep 7; 101(36): 13306–13311. Published online 2004 Aug 25. doi: 10.1073/pnas.0405220101