PMC Links for Taxonomy (Select 2169561) - PMC

Select item 69617211.

Bovine leukemia virus tax gene/Tax protein polymorphism and its relation to Enzootic Bovine Leukosis

Irina M. Zyrianova, Svetlana N. Kovalchuk

Virulence. 2020; 11(1): 80–87. Published online 2019 Dec 28. doi: 10.1080/21505594.2019.1708051

PMCID:: PMC6961721

Article PDF–3.2M

Select item 69260062.

Metatranscriptomic reconstruction reveals RNA viruses with the potential to shape carbon cycling in soil

Evan P. Starr, Erin E. Nuccio, Jennifer Pett-Ridge, Jillian F. Banfield, Mary K. Firestone

Proc Natl Acad Sci U S A. 2019 Dec 17; 116(51): 25900–25908. Published online 2019 Nov 26. doi: 10.1073/pnas.1908291116

PMCID:: PMC6926006

Article PDF–955K

Select item 68928643.

A functional investigation of the suppression of CpG and UpA dinucleotide frequencies in plant RNA virus genomes

Ahmad Ibrahim, Jelke Fros, Andre Bertran, Ferdyansyah Sechan, Valerie Odon, Leslie Torrance, Richard Kormelink, Peter Simmonds

Sci Rep. 2019; 9: 18359. Published online 2019 Dec 4. doi: 10.1038/s41598-019-54853-0

PMCID:: PMC6892864

Article PDF–2.3M

Select item 66684154.

Multiple origins of prokaryotic and eukaryotic single-stranded DNA viruses from bacterial and archaeal plasmids

Darius Kazlauskas, Arvind Varsani, Eugene V. Koonin, Mart Krupovic

Nat Commun. 2019; 10: 3425. Published online 2019 Jul 31. doi: 10.1038/s41467-019-11433-0

PMCID:: PMC6668415

Article PDF–3.1M

Select item 65358815.

Genotyping Based on the LTR Region of Small Ruminant Lentiviruses from Naturally Infected Sheep and Goats from Mexico

Wolfang P. S. Mendiola, Jorge L. Tórtora, Humberto A. Martínez, María M. García, Sandra Cuevas-Romero, José L. Cerriteño, Hugo Ramírez

Biomed Res Int. 2019; 2019: 4279573. Published online 2019 May 12. doi: 10.1155/2019/4279573

PMCID:: PMC6535881

Article PDF–1.9M

Select item 65255426.

Structure of the Ty3/Gypsy retrotransposon capsid and the evolution of retroviruses

Svetlana O. Dodonova, Simone Prinz, Virginia Bilanchone, Suzanne Sandmeyer, John A. G. Briggs

Proc Natl Acad Sci U S A. 2019 May 14; 116(20): 10048–10057. Published online 2019 Apr 29. doi: 10.1073/pnas.1900931116

PMCID:: PMC6525542

Article PDF–2.8M

Select item 64102277.

Metagenomic Characterization of the Viral Community of the South Scotia Ridge

Qingwei Yang, Chen Gao, Yong Jiang, Min Wang, Xinhao Zhou, Hongbing Shao, Zheng Gong, Andrew McMinn

Viruses. 2019 Feb; 11(2): 95. Published online 2019 Jan 24. doi: 10.3390/v11020095

PMCID:: PMC6410227

Article PDF–2.9M

Select item 63570158.

Expanding Repertoire of Plant Positive-Strand RNA Virus Proteases

Krin S. Mann, Hélène Sanfaçon

Viruses. 2019 Jan; 11(1): 66. Published online 2019 Jan 15. doi: 10.3390/v11010066

PMCID:: PMC6357015

Article PDF–1.7M

Select item 63555439.

Taxonomic Changes for Human and Animal Viruses, 2016 to 2018

Michael J. Loeffelholz, Bradley W. Fenwick

J Clin Microbiol. 2019 Feb; 57(2): e01457-18. Prepublished online 2018 Oct 10. Published online 2019 Jan 30. doi: 10.1128/JCM.01457-18

PMCID:: PMC6355543

Article PDF–170K

Select item 633343410.

Bovine leukemia virus pre-miRNA genes’ polymorphism

I.M. Zyrianova, S.N. Koval’chuk

RNA Biol. 2018; 15(12): 1440–1447. Published online 2018 Dec 4. doi: 10.1080/15476286.2018.1555406

PMCID:: PMC6333434

Article PDF–2.0M

Select item 628221211.

Origins and Evolution of the Global RNA Virome

Yuri I. Wolf, Darius Kazlauskas, Jaime Iranzo, Adriana Lucía-Sanz, Jens H. Kuhn, Mart Krupovic, Valerian V. Dolja, Eugene V. Koonin

mBio. 2018 Nov-Dec; 9(6): e02329-18. Published online 2018 Nov 27. doi: 10.1128/mBio.02329-18

PMCID:: PMC6282212

Article PDF–5.8M

Select item 623076712.

Evaluation of the genomic diversity of viruses infecting bacteria, archaea and eukaryotes using a common bioinformatic platform: steps towards a unified taxonomy

Pakorn Aiewsakun, Evelien M. Adriaenssens, Rob Lavigne, Andrew M. Kropinski, Peter Simmonds

J Gen Virol. 2018 Sep; 99(9): 1331–1343. Published online 2018 Jul 17. doi: 10.1099/jgv.0.001110

PMCID:: PMC6230767

Article PDF–8.9M

Select item 611488213.

Nomenclature for endogenous retrovirus (ERV) loci

Robert J. Gifford, Jonas Blomberg, John M. Coffin, Hung Fan, Thierry Heidmann, Jens Mayer, Jonathan Stoye, Michael Tristem, Welkin E. Johnson

Retrovirology. 2018; 15: 59. Published online 2018 Aug 28. doi: 10.1186/s12977-018-0442-1

PMCID:: PMC6114882

Article PDF–1.9M

Select item 597448914.

Ortervirales: New Virus Order Unifying Five Families of Reverse-Transcribing Viruses

Mart Krupovic, Jonas Blomberg, John M. Coffin, Indranil Dasgupta, Hung Fan, Andrew D. Geering, Robert Gifford, Balázs Harrach, Roger Hull, Welkin Johnson, Jan F. Kreuze, Dirk Lindemann, Carlos Llorens, Ben Lockhart, Jens Mayer, Emmanuelle Muller, Neil E. Olszewski, Hanu R. Pappu, Mikhail M. Pooggin, Katja R. Richert-Pöggeler, Sead Sabanadzovic, Hélène Sanfaçon, James E. Schoelz, Susan Seal, Livia Stavolone, Jonathan P. Stoye, Pierre-Yves Teycheney, Michael Tristem, Eugene V. Koonin, Jens H. Kuhn

J Virol. 2018 Jun 15; 92(12): e00515-18. Prepublished online 2018 Apr 4. Published online 2018 May 29. doi: 10.1128/JVI.00515-18

PMCID:: PMC5974489

Article PDF–622K

Select item 581926115.

The genomic underpinnings of eukaryotic virus taxonomy: creating a sequence-based framework for family-level virus classification

Pakorn Aiewsakun, Peter Simmonds

Microbiome. 2018; 6: 38. Published online 2018 Feb 20. doi: 10.1186/s40168-018-0422-7

PMCID:: PMC5819261

Article PDF–4.2M

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