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Select item 69784521.

In silico Design of a Multivalent Vaccine Against Candida albicans

Shikha Tarang, Varun Kesherwani, Blake LaTendresse, Laramie Lindgren, Sonia M. Rocha-Sanchez, Michael D. Weston

Sci Rep. 2020; 10: 1066. Published online 2020 Jan 23. doi: 10.1038/s41598-020-57906-x

PMCID:: PMC6978452

Article PDF–1.1M

Select item 68561792.

DAMIAN: an open source bioinformatics tool for fast, systematic and cohort based analysis of microorganisms in diagnostic samples

Malik Alawi, Lia Burkhardt, Daniela Indenbirken, Kerstin Reumann, Maximilian Christopeit, Nicolaus Kröger, Marc Lütgehetmann, Martin Aepfelbacher, Nicole Fischer, Adam Grundhoff

Sci Rep. 2019; 9: 16841. Published online 2019 Nov 14. doi: 10.1038/s41598-019-52881-4

PMCID:: PMC6856179

Article PDF–3.1M

Select item 68225243.

Annotation of a hypothetical protein coding gene PAS_chr2-2_0152 containing Lysine Methyl transferase SMYD domain from Komagataella phaffii GS115

Ridip Kumar Gogoi, Ringhoilal Chorei, Himanshu Kishore Prasad

Bioinformation. 2019; 15(8): 542–547. Published online 2019 Aug 31. doi: 10.6026/97320630015542

PMCID:: PMC6822524

Article PDF–1.3M

Select item 67815714.

The BioCyc collection of microbial genomes and metabolic pathways

Peter D Karp, Richard Billington, Ron Caspi, Carol A Fulcher, Mario Latendresse, Anamika Kothari, Ingrid M Keseler, Markus Krummenacker, Peter E Midford, Quang Ong, Wai Kit Ong, Suzanne M Paley, Pallavi Subhraveti

Brief Bioinform. 2019 Jul; 20(4): 1085–1093. Published online 2017 Aug 17. doi: 10.1093/bib/bbx085

PMCID:: PMC6781571

Article PDF–885K

Select item 66952045.

The NDV-3A vaccine protects mice from multidrug resistant Candida auris infection

Shakti Singh, Priya Uppuluri, Zeinab Mamouei, Abdullah Alqarihi, Hana Elhassan, Samuel French, Shawn R. Lockhart, Tom Chiller, John E. Edwards, Jr., Ashraf S. Ibrahim

PLoS Pathog. 2019 Aug; 15(8): e1007460. Published online 2019 Aug 5. doi: 10.1371/journal.ppat.1007460

PMCID:: PMC6695204

Article PDF–4.2M

Select item 64128666.

FTIR and Raman Spectroscopy-Based Biochemical Profiling Reflects Genomic Diversity of Clinical Candida Isolates That May Be Useful for Diagnosis and Targeted Therapy of Candidiasis

Leszek Potocki, Joanna Depciuch, Ewelina Kuna, Mariusz Worek, Anna Lewinska, Maciej Wnuk

Int J Mol Sci. 2019 Feb; 20(4): 988. Published online 2019 Feb 25. doi: 10.3390/ijms20040988

PMCID:: PMC6412866

Article PDF–6.2M

Select item 59759597.

Use of the BioGRID Database for Analysis of Yeast Protein and Genetic Interactions

Rose Oughtred, Andrew Chatr-aryamontri, Bobby-Joe Breitkreutz, Christie S. Chang, Jennifer M. Rust, Chandra L. Theesfeld, Sven Heinicke, Ashton Breitkreutz, Daici Chen, Jodi Hirschman, Nadine Kolas, Michael S. Livstone, Julie Nixon, Lara O’Donnell, Lindsay Ramage, Andrew Winter, Teresa Reguly, Adnane Sellam, Chris Stark, Lorrie Boucher, Kara Dolinski, Mike Tyers

Cold Spring Harb Protoc. Author manuscript; available in PMC 2018 May 30.

Published in final edited form as: Cold Spring Harb Protoc. 2016 Jan 4; 2016(1): pdb.prot088880. Published online 2016 Jan 4. doi: 10.1101/pdb.prot088880

PMCID:: PMC5975959

Article PDF–451K

Select item 59759568.

BioGRID: A Tool for Studying Biological Interactions in Yeast

Cold Spring Harb Protoc. Author manuscript; available in PMC 2018 May 30.

Published in final edited form as: Cold Spring Harb Protoc. 2016 Jan 4; 2016(1): pdb.top080754. Published online 2016 Jan 4. doi: 10.1101/pdb.top080754

PMCID:: PMC5975956

Article PDF–347K

Select item 58028779.

Rediscovering the octapeptins

Tony Velkov, Kade Roberts, Jian Li

Nat Prod Rep. Author manuscript; available in PMC 2018 Mar 17.

Published in final edited form as: Nat Prod Rep. 2017 Mar 17; 34(3): 295–309. doi: 10.1039/c6np00113k

PMCID:: PMC5802877

Article PDF–793K

Select item 560956610.

Elucidation of antimicrobial activity and mechanism of action by N-substituted carbazole derivatives

Johannes D. Clausen, Lasse Kjellerup, Karen O'Hanlon Cohrt, John Bondo Hansen, William Dalby-Brown, Anne-Marie L. Winther

Bioorg Med Chem Lett. 2017 Oct 1; 27(19): 4564–4570. doi: 10.1016/j.bmcl.2017.08.067

PMCID:: PMC5609566

Article PDF–782K

Select item 547008911.

Transcription Factor Repertoire of Necrotrophic Fungal Phytopathogen Ascochyta rabiei: Predominance of MYB Transcription Factors As Potential Regulators of Secretome

Sandhya Verma, Rajesh K. Gazara, Praveen K. Verma

Front Plant Sci. 2017; 8: 1037. Published online 2017 Jun 14. doi: 10.3389/fpls.2017.01037

PMCID:: PMC5470089

Article PDF–4.6M

Select item 480018012.

Triclosan Demonstrates Synergic Effect with Amphotericin B and Fluconazole and Induces Apoptosis-Like Cell Death in Cryptococcus neoformans

Elaheh Movahed, Grace Min Yi Tan, Komathy Munusamy, Tee Cian Yeow, Sun Tee Tay, Won Fen Wong, Chung Yeng Looi

Front Microbiol. 2016; 7: 360. Published online 2016 Mar 21. doi: 10.3389/fmicb.2016.00360

PMCID:: PMC4800180

Article PDF–1.0M

Select item 479718413.

Comparison of module detection algorithms in protein networks and investigation of the biological meaning of predicted modules

Shailesh Tripathi, Salissou Moutari, Matthias Dehmer, Frank Emmert-Streib

BMC Bioinformatics. 2016; 17: 129. Published online 2016 Mar 18. doi: 10.1186/s12859-016-0979-8

PMCID:: PMC4797184

Article PDF–3.2M

Select item 443228514.

Two Duplicated Genes DDI2 and DDI3 in Budding Yeast Encode a Cyanamide Hydratase and Are Induced by Cyanamide

Jia Li, Michael Biss, Yu Fu, Xin Xu, Stanley A. Moore, Wei Xiao

J Biol Chem. 2015 May 15; 290(20): 12664–12675. Published online 2015 Apr 6. doi: 10.1074/jbc.M115.645408

PMCID:: PMC4432285

Article PDF–1.5M

Select item 412898915.

Effects of simulated microgravity by RCCS on the biological features of Candida albicans

Wenjun Jiang, Bingxin Xu, Yong Yi, Yuling Huang, Xiao-Ou Li, Fuquan Jiang, Jinlian Zhou, Jianzhong Zhang, Yan Cui

Int J Clin Exp Pathol. 2014; 7(7): 3781–3790. Published online 2014 Jun 15.

PMCID:: PMC4128989

Article PDF–1.8M

Select item 392760716.

Annotation of Protein Domains Reveals Remarkable Conservation in the Functional Make up of Proteomes Across Superkingdoms

Arshan Nasir, Aisha Naeem, Muhammad Jawad Khan, Horacio D. Lopez-Nicora, Gustavo Caetano-Anollés

Genes (Basel) 2011 Dec; 2(4): 869–911. Published online 2011 Nov 8. doi: 10.3390/genes2040869

PMCID:: PMC3927607

Article PDF–2.0M

Select item 341092817.

Identification and Analysis of Cation Channel Homologues in Human Pathogenic Fungi

David L. Prole, Colin W. Taylor

PLoS One. 2012; 7(8): e42404. Published online 2012 Aug 2. doi: 10.1371/journal.pone.0042404

PMCID:: PMC3410928

Article PDF–1.9M

Select item 335634218.

Genome and Transcriptome Analysis of the Food-Yeast Candida utilis

Yasuyuki Tomita, Kazuho Ikeo, Hideyuki Tamakawa, Takashi Gojobori, Shigehito Ikushima

PLoS One. 2012; 7(5): e37226. Published online 2012 May 18. doi: 10.1371/journal.pone.0037226

PMCID:: PMC3356342

Article PDF–1.2M

Select item 296312319.

Functional Promiscuity of Homologues of the Bacterial ArsA ATPases

Rostislav Castillo, Milton H. Saier, Jr.

Int J Microbiol. 2010; 2010: 187373. Published online 2010 Oct 20. doi: 10.1155/2010/187373

PMCID:: PMC2963123

Article PDF–1.5M

Select item 287113520.

Engineering Cofactor Preference of Ketone Reducing Biocatalysts: A Mutagenesis Study on a γ-Diketone Reductase from the Yeast Saccharomyces cerevisiae Serving as an Example

Michael Katzberg, Nàdia Skorupa-Parachin, Marie-Françoise Gorwa-Grauslund, Martin Bertau

Int J Mol Sci. 2010; 11(4): 1735–1758. Published online 2010 Apr 14. doi: 10.3390/ijms11041735

PMCID:: PMC2871135

Article PDF–916K

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