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Echinoidea tRNA-Phe (trnF), 12S ribosomal RNA, tRNA-Glu (trnE), and tRNA-Thr (trnT) genes, D-loop, tRNA-Pro (trnP), tRNA-Gln (trnQ), tRNA-Asn (trnN), tRNA-Leu (trnL), tRNA-Ala (trnA), tRNA-Trp (trnW), tRNA-Cys (trnC), tRNA-Val (trnV), tRNA-Met (trnM), tRNA-Asp (trnD), tRNA-Tyr (trnY), tRNA-Gly (trnG), and tRNA-Leu (trnL) genes, complete sequence; NADH dehydrogenase subunit 1 (ND1) gene, complete cds; tRNA-Ile (trnI) gene, complete sequence; NADH dehydrogenase subunit 2 (ND2) gene, complete cds; 16S ribosomal RNA gene, complete sequence; cytochrome c oxidase subunit 1 (COI) gene, complete cds; tRNA-Arg (trnR) gene, complete sequence; NADH dehydrogenase subunit 4L (ND4L) gene, partial cds; cytochrome c oxidase subunit 2 (COII) gene, complete cds; tRNA-Lys (trnK) gene, complete sequence; ATP synthase F0 subunit 8 (ATP8), ATP synthase F0 subunit 6 (ATP6), and cytochrome c oxidase subunit 3 (COIII) genes, complete cds; tRNA-Ser (trnS) gene, complete sequence; NADH dehydrogenase subunit 3 (ND3) and NADH dehydrogenase subunit 4 (ND4) genes, complete cds; tRNA-His (trnH) and tRNA-Ser (trnS) genes, complete sequence; and NADH dehydrogenase subunit 5 (ND5), NADH dehydrogenase subunit 6 (ND6), and cytochrome b (CYTB) genes, complete cds; mitochondrial.

PopSet: 1878255340

Study Details

Effective DNA extraction methods for mitochondrial phylogenomics of the sea urchins

Wakayama,N., Kiyono,Y., Matsumoto,N., Saitoh,M. and Kanazawa,K.

(10-21-2019) Zoosymposia 15:(1)192-202

Sequences in this data set

  • MK609487.1Colobocentrotus mertensii voucher KNZ-OKN19 mitochondrion, complete genome
  • MK609486.1Pseudoboletia maculata voucher KNZ-KUC33 mitochondrion, complete genome
  • MK609485.1Tripneustes gratilla voucher KNZ-KUC16 mitochondrion, complete genome
  • MK609484.1Echinothrix calamaris voucher KNZ-KUC07 mitochondrion, complete genome
  • MK609483.1Stylocidaris reini voucher KNZ-KMR12 mitochondrion, complete genome
  • MK609482.1Prionocidaris baculosa voucher KNZ-KMR05 mitochondrion, complete genome

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  • Echinoidea tRNA-Phe (trnF), 12S ribosomal RNA, tRNA-Glu (trnE), and tRNA-Thr (tr...
    Echinoidea tRNA-Phe (trnF), 12S ribosomal RNA, tRNA-Glu (trnE), and tRNA-Thr (trnT) genes, D-loop, tRNA-Pro (trnP), tRNA-Gln (trnQ), tRNA-Asn (trnN), tRNA-Leu (trnL), tRNA-Ala (trnA), tRNA-Trp (trnW), tRNA-Cys (trnC), tRNA-Val (trnV), tRNA-Met (trnM), tRNA-Asp (trnD), tRNA-Tyr (trnY), tRNA-Gly (trnG), and tRNA-Leu (trnL) genes, complete sequence; NADH dehydrogenase subunit 1 (ND1) gene, complete cds; tRNA-Ile (trnI) gene, complete sequence; NADH dehydrogenase subunit 2 (ND2) gene, complete cds; 16S ribosomal RNA gene, complete sequence; cytochrome c oxidase subunit 1 (COI) gene, complete cds; tRNA-Arg (trnR) gene, complete sequence; NADH dehydrogenase subunit 4L (ND4L) gene, partial cds; cytochrome c oxidase subunit 2 (COII) gene, complete cds; tRNA-Lys (trnK) gene, complete sequence; ATP synthase F0 subunit 8 (ATP8), ATP synthase F0 subunit 6 (ATP6), and cytochrome c oxidase subunit 3 (COIII) genes, complete cds; tRNA-Ser (trnS) gene, complete sequence; NADH dehydrogenase subunit 3 (ND3) and NADH dehydrogenase subunit 4 (ND4) genes, complete cds; tRNA-His (trnH) and tRNA-Ser (trnS) genes, complete sequence; and NADH dehydrogenase subunit 5 (ND5), NADH dehydrogenase subunit 6 (ND6), and cytochrome b (CYTB) genes, complete cds; mitochondrial.
    PopSet: 1878255340
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