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Escherichia coli O-antigen gene cluster, complete sequence.

PopSet: 379332480

GenBank FASTA

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Study Details

Association of Nucleotide Polymorphisms within the O-Antigen Gene Cluster of Escherichia coli O26, O45, O103, O111, O121, and O145 with Serogroups and Genetic Subtypes

Norman,K.N., Strockbine,N.A. and Bono,J.L.

(2012) Appl. Environ. Microbiol. 78:(18)6689-6703

PMID:: 22798363

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Sequences in this data set

JN859220.1Escherichia coli strain 6507 WbqA (wbqA), WbqB (wbqB), RmlB (rmlB), RmlA (rmlA), VioA (vioA), WbqC (wbqC), WbqD (wbqD), Wzx (wzx), WbqE (wbqE), WbqF (wbqF), Wzy (wzy), WbqG (wbqG), WbqH (wbqH), and WbqI (wbqI) genes, complete cds
JN859219.1Escherichia coli strain 11215 WbqA (wbqA), WbqB (wbqB), RmlB (rmlB), RmlA (rmlA), VioA (vioA), WbqC (wbqC), WbqD (wbqD), Wzx (wzx), WbqE (wbqE), WbqF (wbqF), Wzy (wzy), WbqG (wbqG), WbqH (wbqH), and WbqI (wbqI) genes, complete cds
JN859218.1Escherichia coli strain 11287 WbqA (wbqA), WbqB (wbqB), RmlB (rmlB), RmlA (rmlA), VioA (vioA), WbqC (wbqC), WbqD (wbqD), Wzx (wzx), WbqE (wbqE), WbqF (wbqF), Wzy (wzy), WbqG (wbqG), WbqH (wbqH), and WbqI (wbqI) genes, complete cds
JN859217.1Escherichia coli strain 13247 WbqA (wbqA), WbqB (wbqB), RmlB (rmlB), RmlA (rmlA), VioA (vioA), WbqC (wbqC), WbqD (wbqD), Wzx (wzx), WbqE (wbqE), WbqF (wbqF), Wzy (wzy), WbqG (wbqG), WbqH (wbqH), and WbqI (wbqI) genes, complete cds
JN859216.1Escherichia coli strain 3056-85 WbqA (wbqA), WbqB (wbqB), RmlB (rmlB), RmlA (rmlA), VioA (vioA), WbqC (wbqC), WbqD (wbqD), Wzx (wzx), WbqE (wbqE), WbqF (wbqF), Wzy (wzy), WbqG (wbqG), WbqH (wbqH), and WbqI (wbqI) genes, complete cds
JN859215.1Escherichia coli strain 5518 WbqA (wbqA), WbqB (wbqB), RmlB (rmlB), RmlA (rmlA), VioA (vioA), WbqC (wbqC), WbqD (wbqD), Wzx (wzx), WbqE (wbqE), WbqF (wbqF), Wzy (wzy), WbqG (wbqG), WbqH (wbqH), and WbqI (wbqI) genes, complete cds
JN859214.1Escherichia coli strain 9918 WbqA (wbqA), WbqB (wbqB), RmlB (rmlB), RmlA (rmlA), VioA (vioA), WbqC (wbqC), WbqD (wbqD), Wzx (wzx), WbqE (wbqE), WbqF (wbqF), Wzy (wzy), WbqG (wbqG), WbqH (wbqH), and WbqI (wbqI) genes, complete cds
JN859213.1Escherichia coli strain TW08868 WbqA (wbqA), WbqB (wbqB), RmlB (rmlB), RmlA (rmlA), VioA (vioA), WbqC (wbqC), WbqD (wbqD), Wzx (wzx), WbqE (wbqE), WbqF (wbqF), Wzy (wzy), WbqG (wbqG), WbqH (wbqH), and WbqI (wbqI) genes, complete cds
JN859212.1Escherichia coli strain EC21 WbqA (wbqA), WbqB (wbqB), RmlB (rmlB), RmlA (rmlA), VioA (vioA), WbqC (wbqC), WbqD (wbqD), Wzx (wzx), WbqE (wbqE), WbqF (wbqF), Wzy (wzy), WbqG (wbqG), WbqH (wbqH), and WbqI (wbqI) genes, complete cds
JN859211.1Escherichia coli strain 90_0373 WbqA (wbqA), WbqB (wbqB), RmlB (rmlB), RmlA (rmlA), VioA (vioA), WbqC (wbqC), WbqD (wbqD), Wzx (wzx), WbqE (wbqE), WbqF (wbqF), Wzy (wzy), WbqG (wbqG), WbqH (wbqH), and WbqI (wbqI) genes, complete cds
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Alignment

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Article reporting this data set

Association of nucleotide polymorphisms within the O-antigen gene cluster of Escherichia coli O26, O45, O103, O111, O121, and O145 with serogroups and genetic subtypes. [Appl Environ Microbiol. 2012]
Association of nucleotide polymorphisms within the O-antigen gene cluster of Escherichia coli O26, O45, O103, O111, O121, and O145 with serogroups and genetic subtypes.
Norman KN, Strockbine NA, Bono JL. Appl Environ Microbiol. 2012 Sep; 78(18):6689-703. Epub 2012 Jul 13.

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