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This legacy RefSNP page contains old data from dbSNP build 151 (March 2018) and is no longer maintained. Please update your links and bookmarks to use the re-designed RefSNP Report page.
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Reference SNP (refSNP) Cluster Report: rs1280779286                 
RefSNP
Organism:human (Homo sapiens)
Molecule Type:Genomic
Created/Updated in build:151/151
Map to Genome Build:108/Weight 1
Validation Status:
Allele
Variation Class:DIV:
deletion/insertion variation
RefSNP Alleles:-/AA (FWD)
Allele Origin:
Ancestral Allele:Not available
Variation Viewer:link to VariationViewer
Clinical Significance:NA
MAF/MinorAlleleCount:-=0.000008/1 (TOPMED)
HGVS Names
  • CM000663.2:g.92664_92665delAA
  • NC_000001.10:g.92664_92665delAA
  • NC_000001.11:g.92664_92665delAA
Links
SNP Details are organized in the following sections:
GeneView Map Submission Fasta Resource Diversity Validation

  Integrated Maps (Hint: click on 'Chr Pos' to see variant in the new NCBI variation viewer) back to top

  GeneView back to top

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A


  Submitter records for this RefSNP Cluster back to top
The submission ss3065282404 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs1280779286 during BLAST analysis for the current build.


NCBI
Assay ID		Handle|Submitter IDValidation
Status		ss to rs
Orientation
/Strand		Alleles5' Near Seq 30 bp3' Near Seq 30 bpEntry
Date		Update
Date		Build
Added		Molecule
Type		Freq
Warning		Ancestral
Allele		Success
Rate
ss3065282404MCHAISSO|NA1924030fwd/-/AAacctcagtccctcagttgtaaaattaaaaaaaaaaaagaagaagaagagt09/15/1709/15/17151Genomic92 %

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|rs1280779286|allelePos=26|totalLen=51|taxid=9606|snpclass=2|alleles='-/AA'|mol=Genomic|build=151
 ACCTCAGTCC CTCAGTTGTA AAATT
 N
 AAAAAAAAAA AAGAAGAAGA AGAGT

  NCBI Resource Links back to top
Submitter-Referenced
dbSNP Blast Analysis

  Population Diversity (Alleles in RefSNP orientation) back to top
There is no frequency data.

  Validation Summary: back to top
Validation statusMarker displays
Mendelian segregation		PCR results confirmed
in multiple reactions		Homozygotes detected
in individual genotype data
UNKNOWNUNKNOWNUNKNOWN