NCBI
dbSNP
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This legacy RefSNP page contains old data from dbSNP build 151 (March 2018) and is no longer maintained. Please update your links and bookmarks to use the re-designed RefSNP Report page.
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Reference SNP (refSNP) Cluster Report: rs41354845                 
RefSNP
Organism:human (Homo sapiens)
Molecule Type:Genomic
Created/Updated in build:127/151
Map to Genome Build:108/Weight
Validation Status:byCluster
Allele
Variation Class:SNV:
single nucleotide variation
RefSNP Alleles:A/G (FWD)
Allele Origin:
Ancestral Allele:A
Variation Viewer:link to VariationViewer
Clinical Significance:NA
NA
HGVS Names
  • J01415.2:m.14582A>G
  • NC_012920.1:m.14582A>G
  • YP_003024037.1:p.Val31Ala
Links
SNP Details are organized in the following sections:
GeneView Map Submission Fasta Resource Diversity Validation

  Integrated Maps (Hint: click on 'Chr Pos' to see variant in the new NCBI variation viewer) back to top

  GeneView back to top

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A


  Submitter records for this RefSNP Cluster back to top
The submission ss491581493 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs41354845 during BLAST analysis for the current build.


NCBI
Assay ID
Handle|Submitter IDValidation
Status
ss to rs
Orientation
/Strand
Alleles5' Near Seq 30 bp3' Near Seq 30 bpEntry
Date
Update
Date
Build
Added
Molecule
Type
Freq
Warning
Ancestral
Allele
Success
Rate
ss66863432ILLUMINA|HumanHap550v1.1_MitoA14583Gfwd/TA/Gacacacccgaccacaccgctaacaatcagtctaaacccccataaataggagaaggcttag11/14/0611/14/06127Genomicunknown
ss66931954ILLUMINA|HumanHap650Yv1.0_MitoA14583Gfwd/TA/Gacacacccgaccacaccgctaacaatcagtctaaacccccataaataggagaaggcttag11/14/0611/14/06127Genomicunknown
ss68074740ILLUMINA|HumanHap250Sv1.0_MitoA14583Gfwd/TA/Gacacacccgaccacaccgctaacaatcagtctaaacccccataaataggagaaggcttag12/06/0612/07/06127Genomicunknown
ss70458794ILLUMINA|HumanHap550v3.0__MitoA14583Gfwd/TA/Gacacacccgaccacaccgctaacaatcagtctaaacccccataaataggagaaggcttag04/20/0703/29/08130Genomicunknown
ss70979334ILLUMINA|HumanHap650Yv3.0_MitoA14583Gfwd/TA/Gacacacccgaccacaccgctaacaatcagtctaaacccccataaataggagaaggcttag04/23/0704/23/07127Genomicunknown
ss75919936ILLUMINA|ILMN_Human_1M_MitoA14583Gfwd/TA/Gacacacccgaccacaccgctaacaatcagtctaaacccccataaataggagaaggcttag08/28/0708/29/07129Genomicunknown
ss152536585ILLUMINA|Human610_Quadv1_B_MitoA14583G-13273306_T_F_1501342502fwd/TA/Gacacacccgaccacaccgctaacaatcagtctaaacccccataaataggagaaggcttag06/18/0906/19/09132Genomicunknown
ss159102667ILLUMINA|Human660W-Quad_v1_A_MitoA14583G-13273306_T_F_1501342502fwd/TA/Gacacacccgaccacaccgctaacaatcagtctaaacccccataaataggagaaggcttag07/06/0907/06/09132Genomicunknown
ss159849694ILLUMINA|HumanOmni1-Quad_v1-0_B_MitoA14583G-13273306_T_F_1501342502fwd/TA/Gacacacccgaccacaccgctaacaatcagtctaaacccccataaataggagaaggcttag08/04/0910/01/09132Genomicunknown
ss169133710ILLUMINA|Human1M-Duov3_B_MitoA14583G-13273306_T_F_1501342502fwd/TA/Gacacacccgaccacaccgctaacaatcagtctaaacccccataaataggagaaggcttag10/01/0910/01/09135Genomicunknown
ss491581493EXOME_CHIP|mitoch_297719_chr_MT_14582fwd/TA/Gacacacccgaccacaccgctaacaatcaatctaaacccccataaataggagaaggcttag03/05/1203/06/12137Genomicunknown
ss662652968SSMP|M_14583fwd/TA/Gcccgaccacaccgctaacaatcaatctaaacccccataaataggagaagg12/14/1202/10/15142Genomicunknown
ss1711595061EVA_MGP|EVA_XIMO_710821fwd/TA/Gcccgaccacaccgctaacaatcaatctaaacccccataaataggagaagg03/09/1503/09/15147Genomicunknown

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|rs41354845|allelePos=201|totalLen=401|taxid=9606|snpclass=1|alleles='A/G'|mol=Genomic|build=147
 TCGCTAACCC CACTAAAACA CTCACCAAGA CCTCAACCCC TGACCCCCAT GCCTCAGGAT
 ACTCCTCAAT AGCCATCGCT GTAGTATATC CAAAGACAAC CATCATTCCC CCTAAATAAA
 TTAAAAAAAC TATTAAACCC ATATAACCTC CCCCAAAATT CAGAATAATA ACACACCCGA
 CCACACCGCT AACAATCAAT
 R
 CTAAACCCCC ATAAATAGGA GAAGGCTTAG AAGAAAACCC CACAAACCCC ATTACTAAAC
 CCACACTCAA CAGAAACAAA GCATACATCA TTATTCTCGC ACGGACTACA ACCACGACCA
 ATGATATGAA AAACCATCGT TGTATTTCAA CTACAAGAAC ACCAATGACC CCAATACGCA
 AAACTAACCC CCTAATAAAA

  NCBI Resource Links back to top
Submitter-Referenced
GenBank
NC_000025
dbSNP Blast Analysis

  Population Diversity (Alleles in RefSNP orientation) back to top
There is no frequency data.

  Validation Summary: back to top
Validation statusMarker displays
Mendelian segregation
PCR results confirmed
in multiple reactions
Homozygotes detected
in individual genotype data
byClusterUNKNOWNUNKNOWNUNKNOWN