NCBI
dbSNP
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Reference SNP (refSNP) Cluster Report: rs764263929                 
RefSNP
Organism:human (Homo sapiens)
Molecule Type:Genomic
Created/Updated in build:144/151
Map to Genome Build:108/Weight 1
Validation Status:byClusterwithHapMapFreq
Allele
Variation Class:SNV:
single nucleotide variation
RefSNP Alleles:A/C (REV)
Allele Origin:
Ancestral Allele:Not available
Variation Viewer:link to VariationViewer
Clinical Significance:NA
NA
HGVS Names
  • KI270708.1:g.52323T>G
  • NC_000001.7:g.140654485A>C
  • NT_187363.1:g.52323T>G
Links
SNP Details are organized in the following sections:
GeneView Map Submission Fasta Resource Diversity Validation

  Integrated Maps (Hint: click on 'Chr Pos' to see variant in the new NCBI variation viewer) back to top

  GeneView back to top

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A


  Submitter records for this RefSNP Cluster back to top
The submission ss9811260 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs764263929 during BLAST analysis for the current build.


NCBI
Assay ID
Handle|Submitter IDValidation
Status
ss to rs
Orientation
/Strand
Alleles5' Near Seq 30 bp3' Near Seq 30 bpEntry
Date
Update
Date
Build
Added
Molecule
Type
Freq
Warning
Ancestral
Allele
Success
Rate
ss9811260BCM_SSAHASNP|chr1.NT_022052.2_75360fwd/TA/Cagcagtgttgctagggcttctaatgaccccaggagtgctgaggtacaagaaaggcacctg06/27/0311/06/03144Genomicunknown
ss11344263WI_SSAHASNP|chr1.NT_022052.2_75360fwd/TA/Cagcagtgttgctagggcttctaatgaccccaggagtgctgaggtacaagaaaggcacctg07/03/0311/10/03144Genomicunknown
ss19126134CSHL-HAPMAP|CSHL-HuDD-200402.chr1.NT_022052.2_75360fwd/TA/Cagcagtgttgctagggcttctaatgaccccaggagtgctgaggtacaagaaaggcacctg02/20/0403/04/04144Genomicunknown

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|rs764263929|allelePos=501|totalLen=1001|taxid=9606|snpclass=1|alleles='A/C'|mol=Genomic|build=144
 CAACCTAACT TAATAGGTAG AAAGACTGAA AACCTAACTT AGGAGTATGC ACCTGTAACT
 ATAGCTGAGT CCTGGCCAAT CCCAACAGCC AAACTTCTGC CACTCACACA CGGCTGAGTG
 TTCAGCTGTG TTCAAATAAG GCAAATGCTG AGCACTGTAA CCAGTCCAGT TGTTTCTGGA
 CCTCACTGCT GAGAACTGTA ACGGACCCAA TTGCTTCTGG ACCTCACTCC TCACTTCAGA
 TTTCTGTACA TCAGGTTCCC TTTATTGTCT ATAAATCTTC CACCATGTAG CTGTGCTGGA
 GTCTCACTGA ATCTGCTGTG ATTCTGGGGC TGCCTGATTC GTGAATCATT CATTGCTCAA
 TTAAGTTCCT TTAAATTTAA TTCAGCTGAA GATTTTCTTT TAATAGATGG TGTCAGAAGT
 GGGATCTGTG GGAGCAGGAC TGCTAGGGCC TCCAGAGCTA TAGTGTGGTG AGCAGTGTTG
 CTAGGGCTTC TAATGACCCC
 M
 AGGAGTGCTG AGGTACAAGA AAGGCACCTG CAAGGACCGC ATTGTGATGC CAGCAGTGGC
 CCACGTGGAG CAGTTGCTAC GGAGACACTG GCTGCAGTGG GGAGGAATGG CTGGGCCTGT
 GCACTCCTCG AAGCTGGTGG GAGCCAGGAA CAGGTGGGAG CCCCACCCCT TCTAAATTGG
 CAGGCAGGAG CCCCACCCTC CCAGGCACAG CTGCAGCCAT CCAGCCATGA CTGCAAACCC
 AGGCATCTTT GCACTCTCAG AGGCCCAGCA AGCCCCCCTG CCACCACAGG CTCAGTTGTA
 CCTGGTCCCA CCACCTGGCG TCTCTCTGCT CCCAGAGCCC ACTCCAACTT CAGATCCAAG
 TTAAGGCTGA ACCCGGCACA GTCACAACCC AGCCCGGTTT GTGCAAGCTC AGGGCAGTGC
 TGACATGCCA GCCCCCTGCC ACCTCAGCCC CTTCCAGACT TTGGGCACTG ACGAGCACAG
 GAGGGAGGTT GAGGTGGGGC

  NCBI Resource Links back to top
Submitter-Referenced
GenBank
NT_022052
dbSNP Blast Analysis

  Population Diversity (Alleles in RefSNP orientation) Note: rs764263929 allele is reverse to the genome back to top
There is no frequency data.

  Validation Summary: back to top
Validation statusMarker displays
Mendelian segregation
PCR results confirmed
in multiple reactions
Homozygotes detected
in individual genotype data
byClusterwithHapMapFreqUNKNOWNUNKNOWNUNKNOWN