Name: rs1000601
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1000601

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr13:95568561 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: T>C / T>G
Variation Type: SNV Single Nucleotide Variation
Frequency: C=0.296245 (78413/264690, TOPMED)
C=0.327058 (80349/245672, ALFA)
C=0.300499 (42041/139904, GnomAD) (+ 18 more)
C=0.26517 (20866/78688, PAGE_STUDY)
C=0.34206 (9666/28258, 14KJPN)
C=0.33741 (5655/16760, 8.3KJPN)
C=0.2850 (1825/6404, 1000G_30x)
C=0.2901 (1453/5008, 1000G)
C=0.3783 (1695/4480, Estonian)
C=0.3752 (1446/3854, ALSPAC)
C=0.3635 (1348/3708, TWINSUK)
C=0.3481 (1020/2930, KOREAN)
C=0.2810 (531/1890, HapMap)
C=0.350 (349/998, GoNL)
C=0.374 (296/792, PRJEB37584)
C=0.367 (220/600, NorthernSweden)
T=0.360 (103/286, SGDP_PRJ)
C=0.190 (41/216, Qatari)
C=0.374 (80/214, Vietnamese)
T=0.36 (15/42, Siberian)
C=0.35 (14/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: CLDN10 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	250708	T=0.673118	C=0.326882, G=0.000000
European	Sub	222136	T=0.665376	C=0.334624, G=0.000000
African	Sub	7980	T=0.8197	C=0.1803, G=0.0000
African Others	Sub	316	T=0.867	C=0.133, G=0.000
African American	Sub	7664	T=0.8177	C=0.1823, G=0.0000
Asian	Sub	3802	T=0.6620	C=0.3380, G=0.0000
East Asian	Sub	3082	T=0.6327	C=0.3673, G=0.0000
Other Asian	Sub	720	T=0.787	C=0.212, G=0.000
Latin American 1	Sub	984	T=0.745	C=0.255, G=0.000
Latin American 2	Sub	6302	T=0.7125	C=0.2875, G=0.0000
South Asian	Sub	306	T=0.709	C=0.291, G=0.000
Other	Sub	9198	T=0.7017	C=0.2983, G=0.0000

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	T=0.703755	C=0.296245
Allele Frequency Aggregator	Total	Global	245672	T=0.672942	C=0.327058, G=0.000000
Allele Frequency Aggregator	European	Sub	219042	T=0.665534	C=0.334466, G=0.000000
Allele Frequency Aggregator	Other	Sub	8398	T=0.7036	C=0.2964, G=0.0000
Allele Frequency Aggregator	African	Sub	6838	T=0.8302	C=0.1698, G=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	6302	T=0.7125	C=0.2875, G=0.0000
Allele Frequency Aggregator	Asian	Sub	3802	T=0.6620	C=0.3380, G=0.0000
Allele Frequency Aggregator	Latin American 1	Sub	984	T=0.745	C=0.255, G=0.000
Allele Frequency Aggregator	South Asian	Sub	306	T=0.709	C=0.291, G=0.000
gnomAD - Genomes	Global	Study-wide	139904	T=0.699501	C=0.300499
gnomAD - Genomes	European	Sub	75776	T=0.65351	C=0.34649
gnomAD - Genomes	African	Sub	41938	T=0.77166	C=0.22834
gnomAD - Genomes	American	Sub	13606	T=0.72034	C=0.27966
gnomAD - Genomes	Ashkenazi Jewish	Sub	3320	T=0.7973	C=0.2027
gnomAD - Genomes	East Asian	Sub	3120	T=0.6510	C=0.3490
gnomAD - Genomes	Other	Sub	2144	T=0.7006	C=0.2994
The PAGE Study	Global	Study-wide	78688	T=0.73483	C=0.26517
The PAGE Study	AfricanAmerican	Sub	32510	T=0.76872	C=0.23128
The PAGE Study	Mexican	Sub	10806	T=0.71793	C=0.28207
The PAGE Study	Asian	Sub	8316	T=0.6524	C=0.3476
The PAGE Study	PuertoRican	Sub	7916	T=0.7249	C=0.2751
The PAGE Study	NativeHawaiian	Sub	4534	T=0.7748	C=0.2252
The PAGE Study	Cuban	Sub	4230	T=0.7121	C=0.2879
The PAGE Study	Dominican	Sub	3828	T=0.7552	C=0.2448
The PAGE Study	CentralAmerican	Sub	2450	T=0.7057	C=0.2943
The PAGE Study	SouthAmerican	Sub	1982	T=0.6993	C=0.3007
The PAGE Study	NativeAmerican	Sub	1260	T=0.6476	C=0.3524
The PAGE Study	SouthAsian	Sub	856	T=0.658	C=0.342
14KJPN	JAPANESE	Study-wide	28258	T=0.65794	C=0.34206
8.3KJPN	JAPANESE	Study-wide	16760	T=0.66259	C=0.33741
1000Genomes_30x	Global	Study-wide	6404	T=0.7149	C=0.2850, G=0.0002
1000Genomes_30x	African	Sub	1786	T=0.8135	C=0.1859, G=0.0006
1000Genomes_30x	Europe	Sub	1266	T=0.6698	C=0.3302, G=0.0000
1000Genomes_30x	South Asian	Sub	1202	T=0.6755	C=0.3245, G=0.0000
1000Genomes_30x	East Asian	Sub	1170	T=0.6590	C=0.3410, G=0.0000
1000Genomes_30x	American	Sub	980	T=0.708	C=0.292, G=0.000
1000Genomes	Global	Study-wide	5008	T=0.7099	C=0.2901
1000Genomes	African	Sub	1322	T=0.8185	C=0.1815
1000Genomes	East Asian	Sub	1008	T=0.6508	C=0.3492
1000Genomes	Europe	Sub	1006	T=0.6759	C=0.3241
1000Genomes	South Asian	Sub	978	T=0.662	C=0.338
1000Genomes	American	Sub	694	T=0.706	C=0.294
Genetic variation in the Estonian population	Estonian	Study-wide	4480	T=0.6217	C=0.3783
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	T=0.6248	C=0.3752
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	T=0.6365	C=0.3635
KOREAN population from KRGDB	KOREAN	Study-wide	2930	T=0.6519	C=0.3481
HapMap	Global	Study-wide	1890	T=0.7190	C=0.2810
HapMap	American	Sub	768	T=0.672	C=0.328
HapMap	African	Sub	692	T=0.805	C=0.195
HapMap	Asian	Sub	254	T=0.646	C=0.354
HapMap	Europe	Sub	176	T=0.693	C=0.307
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	T=0.650	C=0.350
CNV burdens in cranial meningiomas	Global	Study-wide	792	T=0.626	C=0.374
CNV burdens in cranial meningiomas	CRM	Sub	792	T=0.626	C=0.374
Northern Sweden	ACPOP	Study-wide	600	T=0.633	C=0.367
SGDP_PRJ	Global	Study-wide	286	T=0.360	C=0.640
Qatari	Global	Study-wide	216	T=0.810	C=0.190
A Vietnamese Genetic Variation Database	Global	Study-wide	214	T=0.626	C=0.374
Siberian	Global	Study-wide	42	T=0.36	C=0.64
The Danish reference pan genome	Danish	Study-wide	40	T=0.65	C=0.35

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 13	NC_000013.11:g.95568561T>C
GRCh38.p14 chr 13	NC_000013.11:g.95568561T>G
GRCh37.p13 chr 13	NC_000013.10:g.96220815T>C
GRCh37.p13 chr 13	NC_000013.10:g.96220815T>G
CLDN10 RefSeqGene	NG_047100.1:g.139963T>C
CLDN10 RefSeqGene	NG_047100.1:g.139963T>G

Gene: CLDN10, claudin 10 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
CLDN10 transcript variant a_v1	NM_001160100.2:c.401+8098… NM_001160100.2:c.401+8098T>C	N/A	Intron Variant
CLDN10 transcript variant b	NM_006984.5:c.464+8098T>C	N/A	Intron Variant
CLDN10 transcript variant a	NM_182848.4:c.458+8098T>C	N/A	Intron Variant
CLDN10 transcript variant X1	XM_047430765.1:c.290+8098… XM_047430765.1:c.290+8098T>C	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	T=	C	G
GRCh38.p14 chr 13	NC_000013.11:g.95568561=	NC_000013.11:g.95568561T>C	NC_000013.11:g.95568561T>G
GRCh37.p13 chr 13	NC_000013.10:g.96220815=	NC_000013.10:g.96220815T>C	NC_000013.10:g.96220815T>G
CLDN10 RefSeqGene	NG_047100.1:g.139963=	NG_047100.1:g.139963T>C	NG_047100.1:g.139963T>G
CLDN10 transcript variant a_v1	NM_001160100.1:c.401+8098=	NM_001160100.1:c.401+8098T>C	NM_001160100.1:c.401+8098T>G
CLDN10 transcript variant a_v1	NM_001160100.2:c.401+8098=	NM_001160100.2:c.401+8098T>C	NM_001160100.2:c.401+8098T>G
CLDN10 transcript variant b	NM_006984.4:c.464+8098=	NM_006984.4:c.464+8098T>C	NM_006984.4:c.464+8098T>G
CLDN10 transcript variant b	NM_006984.5:c.464+8098=	NM_006984.5:c.464+8098T>C	NM_006984.5:c.464+8098T>G
CLDN10 transcript variant a	NM_182848.3:c.458+8098=	NM_182848.3:c.458+8098T>C	NM_182848.3:c.458+8098T>G
CLDN10 transcript variant a	NM_182848.4:c.458+8098=	NM_182848.4:c.458+8098T>C	NM_182848.4:c.458+8098T>G
CLDN10 transcript variant X1	XM_047430765.1:c.290+8098=	XM_047430765.1:c.290+8098T>C	XM_047430765.1:c.290+8098T>G

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

107 SubSNP, 21 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	TSC-CSHL	ss1460435	Oct 05, 2000 (86)
2	SC_JCM	ss5756631	Feb 20, 2003 (111)
3	SC_SNP	ss13197441	Dec 05, 2003 (119)
4	ILLUMINA	ss65714001	Oct 16, 2006 (127)
5	ILLUMINA	ss74858464	Dec 06, 2007 (129)
6	KRIBB_YJKIM	ss102644664	Feb 05, 2009 (130)
7	BGI	ss103150704	Dec 01, 2009 (131)
8	1000GENOMES	ss108017429	Jan 22, 2009 (130)
9	ILLUMINA-UK	ss118946543	Feb 15, 2009 (130)
10	GMI	ss155260004	Dec 01, 2009 (131)
11	ILLUMINA	ss159850699	Dec 01, 2009 (131)
12	COMPLETE_GENOMICS	ss168584026	Jul 04, 2010 (132)
13	ILLUMINA	ss169494877	Jul 04, 2010 (132)
14	BUSHMAN	ss199588967	Jul 04, 2010 (132)
15	1000GENOMES	ss226359884	Jul 14, 2010 (132)
16	1000GENOMES	ss236388249	Jul 15, 2010 (132)
17	1000GENOMES	ss242853088	Jul 15, 2010 (132)
18	BL	ss255259869	May 09, 2011 (134)
19	GMI	ss281843931	May 04, 2012 (137)
20	ILLUMINA	ss479153990	May 04, 2012 (137)
21	ILLUMINA	ss479155582	May 04, 2012 (137)
22	ILLUMINA	ss479469424	Sep 08, 2015 (146)
23	ILLUMINA	ss484378166	May 04, 2012 (137)
24	ILLUMINA	ss536564502	Sep 08, 2015 (146)
25	TISHKOFF	ss563855243	Apr 25, 2013 (138)
26	SSMP	ss659496702	Apr 25, 2013 (138)
27	ILLUMINA	ss779025748	Sep 08, 2015 (146)
28	ILLUMINA	ss782635370	Sep 08, 2015 (146)
29	ILLUMINA	ss783604917	Sep 08, 2015 (146)
30	ILLUMINA	ss831885445	Sep 08, 2015 (146)
31	ILLUMINA	ss834488398	Sep 08, 2015 (146)
32	EVA-GONL	ss990740085	Aug 21, 2014 (142)
33	JMKIDD_LAB	ss1079351167	Aug 21, 2014 (142)
34	1000GENOMES	ss1349487143	Aug 21, 2014 (142)
35	DDI	ss1427294750	Apr 01, 2015 (144)
36	EVA_GENOME_DK	ss1577002826	Apr 01, 2015 (144)
37	EVA_UK10K_ALSPAC	ss1630947689	Apr 01, 2015 (144)
38	EVA_UK10K_TWINSUK	ss1673941722	Apr 01, 2015 (144)
39	EVA_DECODE	ss1694730014	Apr 01, 2015 (144)
40	EVA_SVP	ss1713414681	Apr 01, 2015 (144)
41	ILLUMINA	ss1752119454	Sep 08, 2015 (146)
42	HAMMER_LAB	ss1807747550	Sep 08, 2015 (146)
43	WEILL_CORNELL_DGM	ss1934101167	Feb 12, 2016 (147)
44	ILLUMINA	ss1946366554	Feb 12, 2016 (147)
45	ILLUMINA	ss1959521703	Feb 12, 2016 (147)
46	GENOMED	ss1967868893	Jul 19, 2016 (147)
47	JJLAB	ss2027824213	Sep 14, 2016 (149)
48	USC_VALOUEV	ss2156190955	Dec 20, 2016 (150)
49	HUMAN_LONGEVITY	ss2198990877	Dec 20, 2016 (150)
50	SYSTEMSBIOZJU	ss2628399885	Nov 08, 2017 (151)
51	ILLUMINA	ss2633101080	Nov 08, 2017 (151)
52	GRF	ss2700584729	Nov 08, 2017 (151)
53	ILLUMINA	ss2710790473	Nov 08, 2017 (151)
54	SWEGEN	ss3011544769	Nov 08, 2017 (151)
55	ILLUMINA	ss3021531684	Nov 08, 2017 (151)
56	BIOINF_KMB_FNS_UNIBA	ss3027733619	Nov 08, 2017 (151)
57	CSHL	ss3350613398	Nov 08, 2017 (151)
58	ILLUMINA	ss3625650003	Oct 12, 2018 (152)
59	ILLUMINA	ss3627131003	Oct 12, 2018 (152)
60	ILLUMINA	ss3631102381	Oct 12, 2018 (152)
61	ILLUMINA	ss3633061432	Oct 12, 2018 (152)
62	ILLUMINA	ss3633764172	Oct 12, 2018 (152)
63	ILLUMINA	ss3634557450	Oct 12, 2018 (152)
64	ILLUMINA	ss3635453993	Oct 12, 2018 (152)
65	ILLUMINA	ss3636246229	Oct 12, 2018 (152)
66	ILLUMINA	ss3637205088	Oct 12, 2018 (152)
67	ILLUMINA	ss3638027873	Oct 12, 2018 (152)
68	ILLUMINA	ss3640264779	Oct 12, 2018 (152)
69	ILLUMINA	ss3643016417	Oct 12, 2018 (152)
70	ILLUMINA	ss3644619643	Oct 12, 2018 (152)
71	ILLUMINA	ss3651920804	Oct 12, 2018 (152)
72	EGCUT_WGS	ss3678827633	Jul 13, 2019 (153)
73	EVA_DECODE	ss3695924709	Jul 13, 2019 (153)
74	ILLUMINA	ss3725414975	Jul 13, 2019 (153)
75	ACPOP	ss3740037763	Jul 13, 2019 (153)
76	ILLUMINA	ss3744116062	Jul 13, 2019 (153)
77	ILLUMINA	ss3744858095	Jul 13, 2019 (153)
78	EVA	ss3751854809	Jul 13, 2019 (153)
79	PAGE_CC	ss3771762782	Jul 13, 2019 (153)
80	ILLUMINA	ss3772357146	Jul 13, 2019 (153)
81	KHV_HUMAN_GENOMES	ss3817186788	Jul 13, 2019 (153)
82	EVA	ss3833717408	Apr 27, 2020 (154)
83	EVA	ss3840448098	Apr 27, 2020 (154)
84	EVA	ss3845935600	Apr 27, 2020 (154)
85	SGDP_PRJ	ss3880646792	Apr 27, 2020 (154)
86	KRGDB	ss3929567633	Apr 27, 2020 (154)
87	EVA	ss3984684973	Apr 26, 2021 (155)
88	GNOMAD	ss4271509760	Apr 26, 2021 (155)
89	TOPMED	ss4957745113	Apr 26, 2021 (155)
90	TOMMO_GENOMICS	ss5211435158	Apr 26, 2021 (155)
91	1000G_HIGH_COVERAGE	ss5294844993	Oct 16, 2022 (156)
92	EVA	ss5315705966	Oct 16, 2022 (156)
93	HUGCELL_USP	ss5489097600	Oct 16, 2022 (156)
94	EVA	ss5511111610	Oct 16, 2022 (156)
95	1000G_HIGH_COVERAGE	ss5594437414	Oct 16, 2022 (156)
96	SANFORD_IMAGENETICS	ss5624332337	Oct 16, 2022 (156)
97	SANFORD_IMAGENETICS	ss5655421841	Oct 16, 2022 (156)
98	TOMMO_GENOMICS	ss5763704081	Oct 16, 2022 (156)
99	EVA	ss5799907196	Oct 16, 2022 (156)
100	YY_MCH	ss5814396721	Oct 16, 2022 (156)
101	EVA	ss5839918412	Oct 16, 2022 (156)
102	EVA	ss5847429476	Oct 16, 2022 (156)
103	EVA	ss5847706411	Oct 16, 2022 (156)
104	EVA	ss5850870426	Oct 16, 2022 (156)
105	EVA	ss5926376263	Oct 16, 2022 (156)
106	EVA	ss5946860905	Oct 16, 2022 (156)
107	EVA	ss5979427354	Oct 16, 2022 (156)
108	1000Genomes	NC_000013.10 - 96220815	Oct 12, 2018 (152)
109	1000Genomes_30x	NC_000013.11 - 95568561	Oct 16, 2022 (156)
110	The Avon Longitudinal Study of Parents and Children	NC_000013.10 - 96220815	Oct 12, 2018 (152)
111	Genetic variation in the Estonian population	NC_000013.10 - 96220815	Oct 12, 2018 (152)
112	The Danish reference pan genome	NC_000013.10 - 96220815	Apr 27, 2020 (154)
113	gnomAD - Genomes	NC_000013.11 - 95568561	Apr 26, 2021 (155)
114	Genome of the Netherlands Release 5	NC_000013.10 - 96220815	Apr 27, 2020 (154)
115	HapMap	NC_000013.11 - 95568561	Apr 27, 2020 (154)
116	KOREAN population from KRGDB	NC_000013.10 - 96220815	Apr 27, 2020 (154)
117	Northern Sweden	NC_000013.10 - 96220815	Jul 13, 2019 (153)
118	The PAGE Study	NC_000013.11 - 95568561	Jul 13, 2019 (153)
119	CNV burdens in cranial meningiomas	NC_000013.10 - 96220815	Apr 26, 2021 (155)
120	Qatari	NC_000013.10 - 96220815	Apr 27, 2020 (154)
121	SGDP_PRJ	NC_000013.10 - 96220815	Apr 27, 2020 (154)
122	Siberian	NC_000013.10 - 96220815	Apr 27, 2020 (154)
123	8.3KJPN	NC_000013.10 - 96220815	Apr 26, 2021 (155)
124	14KJPN	NC_000013.11 - 95568561	Oct 16, 2022 (156)
125	TopMed	NC_000013.11 - 95568561	Apr 26, 2021 (155)
126	UK 10K study - Twins	NC_000013.10 - 96220815	Oct 12, 2018 (152)
127	A Vietnamese Genetic Variation Database	NC_000013.10 - 96220815	Jul 13, 2019 (153)
128	ALFA	NC_000013.11 - 95568561	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs386508732	Aug 21, 2014 (142)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss108017429, ss118946543, ss168584026, ss199588967, ss255259869, ss281843931, ss479153990, ss1694730014, ss1713414681, ss3643016417	NC_000013.9:95018815:T:C	NC_000013.11:95568560:T:C	(self)
62409874, 34676057, 24565881, 3439869, 15484025, 36745027, 13322628, 234479, 16143097, 32663772, 8707309, 69404465, 34676057, 7708893, ss226359884, ss236388249, ss242853088, ss479155582, ss479469424, ss484378166, ss536564502, ss563855243, ss659496702, ss779025748, ss782635370, ss783604917, ss831885445, ss834488398, ss990740085, ss1079351167, ss1349487143, ss1427294750, ss1577002826, ss1630947689, ss1673941722, ss1752119454, ss1807747550, ss1934101167, ss1946366554, ss1959521703, ss1967868893, ss2027824213, ss2156190955, ss2628399885, ss2633101080, ss2700584729, ss2710790473, ss3011544769, ss3021531684, ss3350613398, ss3625650003, ss3627131003, ss3631102381, ss3633061432, ss3633764172, ss3634557450, ss3635453993, ss3636246229, ss3637205088, ss3638027873, ss3640264779, ss3644619643, ss3651920804, ss3678827633, ss3740037763, ss3744116062, ss3744858095, ss3751854809, ss3772357146, ss3833717408, ss3840448098, ss3880646792, ss3929567633, ss3984684973, ss5211435158, ss5315705966, ss5511111610, ss5624332337, ss5655421841, ss5799907196, ss5839918412, ss5847429476, ss5847706411, ss5946860905, ss5979427354	NC_000013.10:96220814:T:C	NC_000013.11:95568560:T:C	(self)
81963349, 440122351, 1063955, 984251, 97541185, 173290771, 9179298183, ss2198990877, ss3027733619, ss3695924709, ss3725414975, ss3771762782, ss3817186788, ss3845935600, ss4271509760, ss4957745113, ss5294844993, ss5489097600, ss5594437414, ss5763704081, ss5814396721, ss5850870426, ss5926376263	NC_000013.11:95568560:T:C	NC_000013.11:95568560:T:C	(self)
ss13197441	NT_009952.13:9310489:T:C	NC_000013.11:95568560:T:C	(self)
ss1460435, ss5756631, ss65714001, ss74858464, ss102644664, ss103150704, ss155260004, ss159850699, ss169494877	NT_009952.14:9310490:T:C	NC_000013.11:95568560:T:C	(self)
81963349, 9179298183, ss5594437414	NC_000013.11:95568560:T:G	NC_000013.11:95568560:T:G	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs1000601

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs1000601