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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs10851643

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr15:59102985 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
A>C / A>G / A>T
Variation Type
SNV Single Nucleotide Variation
Frequency
C=0.340138 (102253/300622, ALFA)
C=0.363229 (96143/264690, TOPMED)
C=0.353043 (49385/139884, GnomAD) (+ 21 more)
C=0.40789 (32102/78702, PAGE_STUDY)
C=0.45700 (12913/28256, 14KJPN)
C=0.45758 (7669/16760, 8.3KJPN)
C=0.3518 (2253/6404, 1000G_30x)
C=0.3532 (1769/5008, 1000G)
C=0.3092 (1385/4480, Estonian)
C=0.3158 (1217/3854, ALSPAC)
C=0.3056 (1133/3708, TWINSUK)
C=0.4536 (1329/2930, KOREAN)
C=0.4131 (861/2084, HGDP_Stanford)
C=0.3478 (658/1892, HapMap)
C=0.4940 (905/1832, Korea1K)
C=0.333 (332/998, GoNL)
C=0.489 (385/788, PRJEB37584)
C=0.312 (187/600, NorthernSweden)
A=0.372 (134/360, SGDP_PRJ)
C=0.361 (78/216, Qatari)
C=0.401 (85/212, Vietnamese)
C=0.26 (12/46, Ancient Sardinia)
C=0.35 (14/40, GENOME_DK)
A=0.42 (15/36, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
None
Publications
1 citation
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 305658 A=0.659767 C=0.340233
European Sub 268798 A=0.665924 C=0.334076
African Sub 9514 A=0.6498 C=0.3502
African Others Sub 372 A=0.629 C=0.371
African American Sub 9142 A=0.6506 C=0.3494
Asian Sub 3942 A=0.5170 C=0.4830
East Asian Sub 3196 A=0.5269 C=0.4731
Other Asian Sub 746 A=0.475 C=0.525
Latin American 1 Sub 1134 A=0.6111 C=0.3889
Latin American 2 Sub 7214 A=0.5123 C=0.4877
South Asian Sub 5224 A=0.7423 C=0.2577
Other Sub 9832 A=0.6283 C=0.3717


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
Allele Frequency Aggregator Total Global 300622 A=0.659862 C=0.340138
Allele Frequency Aggregator European Sub 265704 A=0.665918 C=0.334082
Allele Frequency Aggregator Other Sub 9032 A=0.6306 C=0.3694
Allele Frequency Aggregator African Sub 8372 A=0.6487 C=0.3513
Allele Frequency Aggregator Latin American 2 Sub 7214 A=0.5123 C=0.4877
Allele Frequency Aggregator South Asian Sub 5224 A=0.7423 C=0.2577
Allele Frequency Aggregator Asian Sub 3942 A=0.5170 C=0.4830
Allele Frequency Aggregator Latin American 1 Sub 1134 A=0.6111 C=0.3889
TopMed Global Study-wide 264690 A=0.636771 C=0.363229
gnomAD - Genomes Global Study-wide 139884 A=0.646957 C=0.353043
gnomAD - Genomes European Sub 75756 A=0.66568 C=0.33432
gnomAD - Genomes African Sub 41900 A=0.64475 C=0.35525
gnomAD - Genomes American Sub 13638 A=0.58271 C=0.41729
gnomAD - Genomes Ashkenazi Jewish Sub 3324 A=0.6194 C=0.3806
gnomAD - Genomes East Asian Sub 3120 A=0.5410 C=0.4590
gnomAD - Genomes Other Sub 2146 A=0.6342 C=0.3658
The PAGE Study Global Study-wide 78702 A=0.59211 C=0.40789
The PAGE Study AfricanAmerican Sub 32516 A=0.64485 C=0.35515
The PAGE Study Mexican Sub 10810 A=0.49593 C=0.50407
The PAGE Study Asian Sub 8318 A=0.5424 C=0.4576
The PAGE Study PuertoRican Sub 7918 A=0.6123 C=0.3877
The PAGE Study NativeHawaiian Sub 4534 A=0.4411 C=0.5589
The PAGE Study Cuban Sub 4230 A=0.6288 C=0.3712
The PAGE Study Dominican Sub 3828 A=0.6429 C=0.3571
The PAGE Study CentralAmerican Sub 2450 A=0.5396 C=0.4604
The PAGE Study SouthAmerican Sub 1982 A=0.5333 C=0.4667
The PAGE Study NativeAmerican Sub 1260 A=0.6032 C=0.3968
The PAGE Study SouthAsian Sub 856 A=0.761 C=0.239
14KJPN JAPANESE Study-wide 28256 A=0.54300 C=0.45700
8.3KJPN JAPANESE Study-wide 16760 A=0.54242 C=0.45758
1000Genomes_30x Global Study-wide 6404 A=0.6482 C=0.3518
1000Genomes_30x African Sub 1786 A=0.6585 C=0.3415
1000Genomes_30x Europe Sub 1266 A=0.7022 C=0.2978
1000Genomes_30x South Asian Sub 1202 A=0.7546 C=0.2454
1000Genomes_30x East Asian Sub 1170 A=0.5547 C=0.4453
1000Genomes_30x American Sub 980 A=0.541 C=0.459
1000Genomes Global Study-wide 5008 A=0.6468 C=0.3532
1000Genomes African Sub 1322 A=0.6475 C=0.3525
1000Genomes East Asian Sub 1008 A=0.5516 C=0.4484
1000Genomes Europe Sub 1006 A=0.6998 C=0.3002
1000Genomes South Asian Sub 978 A=0.770 C=0.230
1000Genomes American Sub 694 A=0.533 C=0.467
Genetic variation in the Estonian population Estonian Study-wide 4480 A=0.6908 C=0.3092
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 A=0.6842 C=0.3158
UK 10K study - Twins TWIN COHORT Study-wide 3708 A=0.6944 C=0.3056
KOREAN population from KRGDB KOREAN Study-wide 2930 A=0.5464 C=0.4536, G=0.0000, T=0.0000
HGDP-CEPH-db Supplement 1 Global Study-wide 2084 A=0.5869 C=0.4131
HGDP-CEPH-db Supplement 1 Est_Asia Sub 470 A=0.572 C=0.428
HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 A=0.659 C=0.341
HGDP-CEPH-db Supplement 1 Middle_Est Sub 350 A=0.551 C=0.449
HGDP-CEPH-db Supplement 1 Europe Sub 320 A=0.622 C=0.378
HGDP-CEPH-db Supplement 1 Africa Sub 242 A=0.653 C=0.347
HGDP-CEPH-db Supplement 1 America Sub 216 A=0.435 C=0.565
HGDP-CEPH-db Supplement 1 Oceania Sub 72 A=0.51 C=0.49
HapMap Global Study-wide 1892 A=0.6522 C=0.3478
HapMap American Sub 770 A=0.671 C=0.329
HapMap African Sub 692 A=0.675 C=0.325
HapMap Asian Sub 254 A=0.551 C=0.449
HapMap Europe Sub 176 A=0.625 C=0.375
Korean Genome Project KOREAN Study-wide 1832 A=0.5060 C=0.4940
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 A=0.667 C=0.333
CNV burdens in cranial meningiomas Global Study-wide 788 A=0.511 C=0.489
CNV burdens in cranial meningiomas CRM Sub 788 A=0.511 C=0.489
Northern Sweden ACPOP Study-wide 600 A=0.688 C=0.312
SGDP_PRJ Global Study-wide 360 A=0.372 C=0.628
Qatari Global Study-wide 216 A=0.639 C=0.361
A Vietnamese Genetic Variation Database Global Study-wide 212 A=0.599 C=0.401
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 46 A=0.74 C=0.26
The Danish reference pan genome Danish Study-wide 40 A=0.65 C=0.35
Siberian Global Study-wide 36 A=0.42 C=0.58
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 15 NC_000015.10:g.59102985A>C
GRCh38.p14 chr 15 NC_000015.10:g.59102985A>G
GRCh38.p14 chr 15 NC_000015.10:g.59102985A>T
GRCh37.p13 chr 15 NC_000015.9:g.59395184A>C
GRCh37.p13 chr 15 NC_000015.9:g.59395184A>G
GRCh37.p13 chr 15 NC_000015.9:g.59395184A>T
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement A= C G T
GRCh38.p14 chr 15 NC_000015.10:g.59102985= NC_000015.10:g.59102985A>C NC_000015.10:g.59102985A>G NC_000015.10:g.59102985A>T
GRCh37.p13 chr 15 NC_000015.9:g.59395184= NC_000015.9:g.59395184A>C NC_000015.9:g.59395184A>G NC_000015.9:g.59395184A>T
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

135 SubSNP, 24 Frequency submissions
No Submitter Submission ID Date (Build)
1 SC_SNP ss16206705 Feb 27, 2004 (120)
2 SC_SNP ss18304218 Feb 27, 2004 (120)
3 SC_SNP ss18551256 Feb 27, 2004 (120)
4 SSAHASNP ss21228841 Apr 05, 2004 (121)
5 ABI ss43696036 Mar 14, 2006 (126)
6 ILLUMINA ss65794762 Oct 16, 2006 (127)
7 ILLUMINA ss66699206 Dec 01, 2006 (127)
8 ILLUMINA ss66905100 Dec 01, 2006 (127)
9 ILLUMINA ss67029194 Dec 01, 2006 (127)
10 ILLUMINA ss70382073 May 18, 2007 (127)
11 ILLUMINA ss70502598 May 25, 2008 (130)
12 ILLUMINA ss71028723 May 18, 2007 (127)
13 ILLUMINA ss75636040 Dec 07, 2007 (129)
14 HGSV ss81060730 Dec 15, 2007 (130)
15 HGSV ss81106733 Dec 15, 2007 (130)
16 HGSV ss84154596 Dec 15, 2007 (130)
17 KRIBB_YJKIM ss85015224 Dec 15, 2007 (130)
18 BGI ss103244149 Dec 01, 2009 (131)
19 1000GENOMES ss114250667 Jan 25, 2009 (130)
20 ILLUMINA-UK ss118247718 Dec 01, 2009 (131)
21 ILLUMINA ss121402329 Dec 01, 2009 (131)
22 ENSEMBL ss136888272 Dec 01, 2009 (131)
23 ILLUMINA ss152848537 Dec 01, 2009 (131)
24 ILLUMINA ss159147663 Dec 01, 2009 (131)
25 ILLUMINA ss159929540 Dec 01, 2009 (131)
26 COMPLETE_GENOMICS ss169626692 Jul 04, 2010 (132)
27 ILLUMINA ss169667826 Jul 04, 2010 (132)
28 ILLUMINA ss170645099 Jul 04, 2010 (132)
29 BUSHMAN ss200908102 Jul 04, 2010 (132)
30 BCM-HGSC-SUB ss207243904 Jul 04, 2010 (132)
31 1000GENOMES ss226921001 Jul 14, 2010 (132)
32 1000GENOMES ss236799060 Jul 15, 2010 (132)
33 1000GENOMES ss243182744 Jul 15, 2010 (132)
34 GMI ss282278453 May 04, 2012 (137)
35 GMI ss286963452 Apr 25, 2013 (138)
36 PJP ss291731456 May 09, 2011 (134)
37 ILLUMINA ss479376639 May 04, 2012 (137)
38 ILLUMINA ss479379804 May 04, 2012 (137)
39 ILLUMINA ss479784003 Sep 08, 2015 (146)
40 ILLUMINA ss484488435 May 04, 2012 (137)
41 ILLUMINA ss536643811 Sep 08, 2015 (146)
42 TISHKOFF ss564513559 Apr 25, 2013 (138)
43 SSMP ss660244196 Apr 25, 2013 (138)
44 ILLUMINA ss778743149 Aug 21, 2014 (142)
45 ILLUMINA ss782690746 Aug 21, 2014 (142)
46 ILLUMINA ss783659021 Aug 21, 2014 (142)
47 ILLUMINA ss825351624 Apr 01, 2015 (144)
48 ILLUMINA ss831941711 Apr 01, 2015 (144)
49 ILLUMINA ss832660290 Aug 21, 2014 (142)
50 ILLUMINA ss833250979 Aug 21, 2014 (142)
51 ILLUMINA ss834202753 Aug 21, 2014 (142)
52 EVA-GONL ss991842867 Aug 21, 2014 (142)
53 JMKIDD_LAB ss1080170152 Aug 21, 2014 (142)
54 1000GENOMES ss1353683801 Aug 21, 2014 (142)
55 DDI ss1427642960 Apr 01, 2015 (144)
56 EVA_GENOME_DK ss1577650378 Apr 01, 2015 (144)
57 EVA_UK10K_ALSPAC ss1633114521 Apr 01, 2015 (144)
58 EVA_UK10K_TWINSUK ss1676108554 Apr 01, 2015 (144)
59 EVA_DECODE ss1695863121 Apr 01, 2015 (144)
60 EVA_SVP ss1713494103 Apr 01, 2015 (144)
61 ILLUMINA ss1752165788 Sep 08, 2015 (146)
62 HAMMER_LAB ss1808228774 Sep 08, 2015 (146)
63 WEILL_CORNELL_DGM ss1935248875 Feb 12, 2016 (147)
64 ILLUMINA ss1946395293 Feb 12, 2016 (147)
65 ILLUMINA ss1959616875 Feb 12, 2016 (147)
66 GENOMED ss1968122121 Jul 19, 2016 (147)
67 JJLAB ss2028404770 Sep 14, 2016 (149)
68 USC_VALOUEV ss2156808961 Dec 20, 2016 (150)
69 HUMAN_LONGEVITY ss2207235411 Dec 20, 2016 (150)
70 SYSTEMSBIOZJU ss2628697305 Nov 08, 2017 (151)
71 ILLUMINA ss2633236502 Nov 08, 2017 (151)
72 GRF ss2701282063 Nov 08, 2017 (151)
73 ILLUMINA ss2710817932 Nov 08, 2017 (151)
74 GNOMAD ss2935528585 Nov 08, 2017 (151)
75 SWEGEN ss3013371915 Nov 08, 2017 (151)
76 ILLUMINA ss3021638108 Nov 08, 2017 (151)
77 BIOINF_KMB_FNS_UNIBA ss3028026271 Nov 08, 2017 (151)
78 CSHL ss3351141097 Nov 08, 2017 (151)
79 ILLUMINA ss3625674367 Oct 12, 2018 (152)
80 ILLUMINA ss3627373771 Oct 12, 2018 (152)
81 ILLUMINA ss3631228778 Oct 12, 2018 (152)
82 ILLUMINA ss3633099295 Oct 12, 2018 (152)
83 ILLUMINA ss3633803973 Oct 12, 2018 (152)
84 ILLUMINA ss3634609355 Oct 12, 2018 (152)
85 ILLUMINA ss3635492841 Oct 12, 2018 (152)
86 ILLUMINA ss3636299273 Oct 12, 2018 (152)
87 ILLUMINA ss3637244125 Oct 12, 2018 (152)
88 ILLUMINA ss3638088787 Oct 12, 2018 (152)
89 ILLUMINA ss3639057422 Oct 12, 2018 (152)
90 ILLUMINA ss3639534048 Oct 12, 2018 (152)
91 ILLUMINA ss3640316676 Oct 12, 2018 (152)
92 ILLUMINA ss3643072816 Oct 12, 2018 (152)
93 ILLUMINA ss3644648391 Oct 12, 2018 (152)
94 URBANLAB ss3650366277 Oct 12, 2018 (152)
95 ILLUMINA ss3652039119 Oct 12, 2018 (152)
96 EGCUT_WGS ss3680516292 Jul 13, 2019 (153)
97 EVA_DECODE ss3697998767 Jul 13, 2019 (153)
98 ILLUMINA ss3725504260 Jul 13, 2019 (153)
99 ACPOP ss3740971916 Jul 13, 2019 (153)
100 ILLUMINA ss3744131893 Jul 13, 2019 (153)
101 ILLUMINA ss3744909872 Jul 13, 2019 (153)
102 EVA ss3753154417 Jul 13, 2019 (153)
103 PAGE_CC ss3771833619 Jul 13, 2019 (153)
104 ILLUMINA ss3772408525 Jul 13, 2019 (153)
105 PACBIO ss3787862620 Jul 13, 2019 (153)
106 PACBIO ss3792872280 Jul 13, 2019 (153)
107 PACBIO ss3797756864 Jul 13, 2019 (153)
108 KHV_HUMAN_GENOMES ss3818471278 Jul 13, 2019 (153)
109 EVA ss3834263224 Apr 27, 2020 (154)
110 EVA ss3840730205 Apr 27, 2020 (154)
111 EVA ss3846219171 Apr 27, 2020 (154)
112 HGDP ss3847525448 Apr 27, 2020 (154)
113 SGDP_PRJ ss3883031825 Apr 27, 2020 (154)
114 KRGDB ss3932212341 Apr 27, 2020 (154)
115 KOGIC ss3976249692 Apr 27, 2020 (154)
116 EVA ss3984702216 Apr 27, 2021 (155)
117 EVA ss3985719883 Apr 27, 2021 (155)
118 EVA ss4017704704 Apr 27, 2021 (155)
119 TOPMED ss4993310695 Apr 27, 2021 (155)
120 TOMMO_GENOMICS ss5216446886 Apr 27, 2021 (155)
121 1000G_HIGH_COVERAGE ss5298634080 Oct 16, 2022 (156)
122 EVA ss5315788369 Oct 16, 2022 (156)
123 EVA ss5419582936 Oct 16, 2022 (156)
124 HUGCELL_USP ss5492342129 Oct 16, 2022 (156)
125 EVA ss5511451953 Oct 16, 2022 (156)
126 1000G_HIGH_COVERAGE ss5600133873 Oct 16, 2022 (156)
127 SANFORD_IMAGENETICS ss5657620925 Oct 16, 2022 (156)
128 TOMMO_GENOMICS ss5770325328 Oct 16, 2022 (156)
129 EVA ss5799939440 Oct 16, 2022 (156)
130 YY_MCH ss5815383936 Oct 16, 2022 (156)
131 EVA ss5828276219 Oct 16, 2022 (156)
132 EVA ss5847745148 Oct 16, 2022 (156)
133 EVA ss5851317136 Oct 16, 2022 (156)
134 EVA ss5876097525 Oct 16, 2022 (156)
135 EVA ss5949026394 Oct 16, 2022 (156)
136 1000Genomes NC_000015.9 - 59395184 Oct 12, 2018 (152)
137 1000Genomes_30x NC_000015.10 - 59102985 Oct 16, 2022 (156)
138 The Avon Longitudinal Study of Parents and Children NC_000015.9 - 59395184 Oct 12, 2018 (152)
139 Genetic variation in the Estonian population NC_000015.9 - 59395184 Oct 12, 2018 (152)
140 The Danish reference pan genome NC_000015.9 - 59395184 Apr 27, 2020 (154)
141 gnomAD - Genomes NC_000015.10 - 59102985 Apr 27, 2021 (155)
142 Genome of the Netherlands Release 5 NC_000015.9 - 59395184 Apr 27, 2020 (154)
143 HGDP-CEPH-db Supplement 1 NC_000015.8 - 57182476 Apr 27, 2020 (154)
144 HapMap NC_000015.10 - 59102985 Apr 27, 2020 (154)
145 KOREAN population from KRGDB NC_000015.9 - 59395184 Apr 27, 2020 (154)
146 Korean Genome Project NC_000015.10 - 59102985 Apr 27, 2020 (154)
147 Northern Sweden NC_000015.9 - 59395184 Jul 13, 2019 (153)
148 The PAGE Study NC_000015.10 - 59102985 Jul 13, 2019 (153)
149 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000015.9 - 59395184 Apr 27, 2021 (155)
150 CNV burdens in cranial meningiomas NC_000015.9 - 59395184 Apr 27, 2021 (155)
151 Qatari NC_000015.9 - 59395184 Apr 27, 2020 (154)
152 SGDP_PRJ NC_000015.9 - 59395184 Apr 27, 2020 (154)
153 Siberian NC_000015.9 - 59395184 Apr 27, 2020 (154)
154 8.3KJPN NC_000015.9 - 59395184 Apr 27, 2021 (155)
155 14KJPN NC_000015.10 - 59102985 Oct 16, 2022 (156)
156 TopMed NC_000015.10 - 59102985 Apr 27, 2021 (155)
157 UK 10K study - Twins NC_000015.9 - 59395184 Oct 12, 2018 (152)
158 A Vietnamese Genetic Variation Database NC_000015.9 - 59395184 Jul 13, 2019 (153)
159 ALFA NC_000015.10 - 59102985 Apr 27, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs59363670 May 25, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
203340, ss81060730, ss81106733, ss84154596, ss114250667, ss118247718, ss159929540, ss169626692, ss200908102, ss207243904, ss282278453, ss286963452, ss291731456, ss479376639, ss825351624, ss1695863121, ss1713494103, ss3639057422, ss3639534048, ss3643072816, ss3847525448 NC_000015.8:57182475:A:C NC_000015.10:59102984:A:C (self)
66763465, 37064347, 26254540, 3880075, 16549861, 39389735, 14256781, 945810, 251738, 17290805, 35048805, 9325315, 74416193, 37064347, 8247615, ss226921001, ss236799060, ss243182744, ss479379804, ss479784003, ss484488435, ss536643811, ss564513559, ss660244196, ss778743149, ss782690746, ss783659021, ss831941711, ss832660290, ss833250979, ss834202753, ss991842867, ss1080170152, ss1353683801, ss1427642960, ss1577650378, ss1633114521, ss1676108554, ss1752165788, ss1808228774, ss1935248875, ss1946395293, ss1959616875, ss1968122121, ss2028404770, ss2156808961, ss2628697305, ss2633236502, ss2701282063, ss2710817932, ss2935528585, ss3013371915, ss3021638108, ss3351141097, ss3625674367, ss3627373771, ss3631228778, ss3633099295, ss3633803973, ss3634609355, ss3635492841, ss3636299273, ss3637244125, ss3638088787, ss3640316676, ss3644648391, ss3652039119, ss3680516292, ss3740971916, ss3744131893, ss3744909872, ss3753154417, ss3772408525, ss3787862620, ss3792872280, ss3797756864, ss3834263224, ss3840730205, ss3883031825, ss3932212341, ss3984702216, ss3985719883, ss4017704704, ss5216446886, ss5315788369, ss5419582936, ss5511451953, ss5657620925, ss5799939440, ss5828276219, ss5847745148, ss5949026394 NC_000015.9:59395183:A:C NC_000015.10:59102984:A:C (self)
87659808, 470666811, 1275072, 32627693, 1055088, 104162432, 208856355, 4090994073, ss2207235411, ss3028026271, ss3650366277, ss3697998767, ss3725504260, ss3771833619, ss3818471278, ss3846219171, ss3976249692, ss4993310695, ss5298634080, ss5492342129, ss5600133873, ss5770325328, ss5815383936, ss5851317136, ss5876097525 NC_000015.10:59102984:A:C NC_000015.10:59102984:A:C (self)
ss16206705, ss18304218, ss18551256, ss21228841 NT_010194.16:30185740:A:C NC_000015.10:59102984:A:C (self)
ss43696036, ss65794762, ss66699206, ss66905100, ss67029194, ss70382073, ss70502598, ss71028723, ss75636040, ss85015224, ss103244149, ss121402329, ss136888272, ss152848537, ss159147663, ss169667826, ss170645099 NT_010194.17:30185740:A:C NC_000015.10:59102984:A:C (self)
39389735, ss3932212341 NC_000015.9:59395183:A:G NC_000015.10:59102984:A:G (self)
39389735, ss3932212341 NC_000015.9:59395183:A:T NC_000015.10:59102984:A:T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs10851643
PMID Title Author Year Journal
21965272 Common genetic variants in cell cycle pathway are associated with survival in stage III-IV non-small-cell lung cancer. Yin J et al. 2011 Carcinogenesis
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07