Name: rs11369038
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs11369038

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr4:109433001-109433018 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(A)₈ / del(A)₅ / del(A)₄ / delA…
del(A)₈ / del(A)₅ / del(A)₄ / delAAA / delAA / delA / dupA / dupAA / dupAAA / dup(A)₄ / dup(A)₅ / dup(A)₆ / dup(A)₉
Variation Type: Indel Insertion and Deletion
Frequency: dupA=0.2040 (1367/6702, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: SEC24B-AS1 : Intron Variant
SEC24B : 2KB Upstream Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	6702	AAAAAAAAAAAAAAAAAA=0.7926	AAAAAAAAAA=0.0001, AAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAA=0.0009, AAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAA=0.2040, AAAAAAAAAAAAAAAAAAAA=0.0024, AAAAAAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAAAAA=0.0000
European	Sub	6004	AAAAAAAAAAAAAAAAAA=0.7690	AAAAAAAAAA=0.0002, AAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAA=0.0010, AAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAA=0.2272, AAAAAAAAAAAAAAAAAAAA=0.0027, AAAAAAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAAAAA=0.0000
African	Sub	352	AAAAAAAAAAAAAAAAAA=1.000	AAAAAAAAAA=0.000, AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAAAA=0.000
African Others	Sub	14	AAAAAAAAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAAA=0.00
African American	Sub	338	AAAAAAAAAAAAAAAAAA=1.000	AAAAAAAAAA=0.000, AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAAAA=0.000
Asian	Sub	66	AAAAAAAAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAAA=0.00
East Asian	Sub	48	AAAAAAAAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAAA=0.00
Other Asian	Sub	18	AAAAAAAAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAAA=0.00
Latin American 1	Sub	24	AAAAAAAAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAAA=0.00
Latin American 2	Sub	140	AAAAAAAAAAAAAAAAAA=1.000	AAAAAAAAAA=0.000, AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAAAA=0.000
South Asian	Sub	10	AAAAAAAAAAAAAAAAAA=1.0	AAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAAAAA=0.0
Other	Sub	106	AAAAAAAAAAAAAAAAAA=0.972	AAAAAAAAAA=0.000, AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAA=0.028, AAAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAAAA=0.000

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	6702	(A)₁₈=0.7926	del(A)₈=0.0001, del(A)₅=0.0000, del(A)₄=0.0000, delAAA=0.0000, delAA=0.0009, delA=0.0000, dupA=0.2040, dupAA=0.0024, dupAAA=0.0000, dup(A)₄=0.0000
Allele Frequency Aggregator	European	Sub	6004	(A)₁₈=0.7690	del(A)₈=0.0002, del(A)₅=0.0000, del(A)₄=0.0000, delAAA=0.0000, delAA=0.0010, delA=0.0000, dupA=0.2272, dupAA=0.0027, dupAAA=0.0000, dup(A)₄=0.0000
Allele Frequency Aggregator	African	Sub	352	(A)₁₈=1.000	del(A)₈=0.000, del(A)₅=0.000, del(A)₄=0.000, delAAA=0.000, delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000, dupAAA=0.000, dup(A)₄=0.000
Allele Frequency Aggregator	Latin American 2	Sub	140	(A)₁₈=1.000	del(A)₈=0.000, del(A)₅=0.000, del(A)₄=0.000, delAAA=0.000, delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000, dupAAA=0.000, dup(A)₄=0.000
Allele Frequency Aggregator	Other	Sub	106	(A)₁₈=0.972	del(A)₈=0.000, del(A)₅=0.000, del(A)₄=0.000, delAAA=0.000, delAA=0.000, delA=0.000, dupA=0.028, dupAA=0.000, dupAAA=0.000, dup(A)₄=0.000
Allele Frequency Aggregator	Asian	Sub	66	(A)₁₈=1.00	del(A)₈=0.00, del(A)₅=0.00, del(A)₄=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dupAAA=0.00, dup(A)₄=0.00
Allele Frequency Aggregator	Latin American 1	Sub	24	(A)₁₈=1.00	del(A)₈=0.00, del(A)₅=0.00, del(A)₄=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dupAAA=0.00, dup(A)₄=0.00
Allele Frequency Aggregator	South Asian	Sub	10	(A)₁₈=1.0	del(A)₈=0.0, del(A)₅=0.0, del(A)₄=0.0, delAAA=0.0, delAA=0.0, delA=0.0, dupA=0.0, dupAA=0.0, dupAAA=0.0, dup(A)₄=0.0

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 4	NC_000004.12:g.109433011_109433018del
GRCh38.p14 chr 4	NC_000004.12:g.109433014_109433018del
GRCh38.p14 chr 4	NC_000004.12:g.109433015_109433018del
GRCh38.p14 chr 4	NC_000004.12:g.109433016_109433018del
GRCh38.p14 chr 4	NC_000004.12:g.109433017_109433018del
GRCh38.p14 chr 4	NC_000004.12:g.109433018del
GRCh38.p14 chr 4	NC_000004.12:g.109433018dup
GRCh38.p14 chr 4	NC_000004.12:g.109433017_109433018dup
GRCh38.p14 chr 4	NC_000004.12:g.109433016_109433018dup
GRCh38.p14 chr 4	NC_000004.12:g.109433015_109433018dup
GRCh38.p14 chr 4	NC_000004.12:g.109433014_109433018dup
GRCh38.p14 chr 4	NC_000004.12:g.109433013_109433018dup
GRCh38.p14 chr 4	NC_000004.12:g.109433010_109433018dup
GRCh37.p13 chr 4	NC_000004.11:g.110354167_110354174del
GRCh37.p13 chr 4	NC_000004.11:g.110354170_110354174del
GRCh37.p13 chr 4	NC_000004.11:g.110354171_110354174del
GRCh37.p13 chr 4	NC_000004.11:g.110354172_110354174del
GRCh37.p13 chr 4	NC_000004.11:g.110354173_110354174del
GRCh37.p13 chr 4	NC_000004.11:g.110354174del
GRCh37.p13 chr 4	NC_000004.11:g.110354174dup
GRCh37.p13 chr 4	NC_000004.11:g.110354173_110354174dup
GRCh37.p13 chr 4	NC_000004.11:g.110354172_110354174dup
GRCh37.p13 chr 4	NC_000004.11:g.110354171_110354174dup
GRCh37.p13 chr 4	NC_000004.11:g.110354170_110354174dup
GRCh37.p13 chr 4	NC_000004.11:g.110354169_110354174dup
GRCh37.p13 chr 4	NC_000004.11:g.110354166_110354174dup
SEC24B RefSeqGene	NG_032166.1:g.4197_4204del
SEC24B RefSeqGene	NG_032166.1:g.4200_4204del
SEC24B RefSeqGene	NG_032166.1:g.4201_4204del
SEC24B RefSeqGene	NG_032166.1:g.4202_4204del
SEC24B RefSeqGene	NG_032166.1:g.4203_4204del
SEC24B RefSeqGene	NG_032166.1:g.4204del
SEC24B RefSeqGene	NG_032166.1:g.4204dup
SEC24B RefSeqGene	NG_032166.1:g.4203_4204dup
SEC24B RefSeqGene	NG_032166.1:g.4202_4204dup
SEC24B RefSeqGene	NG_032166.1:g.4201_4204dup
SEC24B RefSeqGene	NG_032166.1:g.4200_4204dup
SEC24B RefSeqGene	NG_032166.1:g.4199_4204dup
SEC24B RefSeqGene	NG_032166.1:g.4196_4204dup

Gene: SEC24B, SEC24 homolog B, COPII coat complex component (plus strand) : 2KB Upstream Variant

Molecule type	Change	Amino acid[Codon]	SO Term
SEC24B transcript variant 2	NM_001042734.4:c.	N/A	Upstream Transcript Variant
SEC24B transcript variant 3	NM_001300813.3:c.	N/A	Upstream Transcript Variant
SEC24B transcript variant 4	NM_001318085.2:c.	N/A	Upstream Transcript Variant
SEC24B transcript variant 5	NM_001318086.2:c.	N/A	Upstream Transcript Variant
SEC24B transcript variant 1	NM_006323.5:c.	N/A	Upstream Transcript Variant
SEC24B transcript variant X10	XM_017007652.3:c.	N/A	Upstream Transcript Variant
SEC24B transcript variant X11	XM_047449519.1:c.	N/A	Upstream Transcript Variant
SEC24B transcript variant X1	XM_011531536.4:c.	N/A	N/A
SEC24B transcript variant X2	XM_011531537.4:c.	N/A	N/A
SEC24B transcript variant X14	XM_011531540.4:c.	N/A	N/A
SEC24B transcript variant X3	XM_047449512.1:c.	N/A	N/A
SEC24B transcript variant X4	XM_047449513.1:c.	N/A	N/A
SEC24B transcript variant X5	XM_047449514.1:c.	N/A	N/A
SEC24B transcript variant X6	XM_047449515.1:c.	N/A	N/A
SEC24B transcript variant X7	XM_047449516.1:c.	N/A	N/A
SEC24B transcript variant X8	XM_047449517.1:c.	N/A	N/A
SEC24B transcript variant X9	XM_047449518.1:c.	N/A	N/A
SEC24B transcript variant X12	XM_047449520.1:c.	N/A	N/A
SEC24B transcript variant X13	XM_047449521.1:c.	N/A	N/A

Gene: SEC24B-AS1, SEC24B antisense RNA 1 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
SEC24B-AS1 transcript	NR_039978.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(A)₁₈=	del(A)₈	del(A)₅	del(A)₄	delAAA	delAA	delA	dupA	dupAA	dupAAA	dup(A)₄	dup(A)₅	dup(A)₆	dup(A)₉
GRCh38.p14 chr 4	NC_000004.12:g.109433001_109433018=	NC_000004.12:g.109433011_109433018del	NC_000004.12:g.109433014_109433018del	NC_000004.12:g.109433015_109433018del	NC_000004.12:g.109433016_109433018del	NC_000004.12:g.109433017_109433018del	NC_000004.12:g.109433018del	NC_000004.12:g.109433018dup	NC_000004.12:g.109433017_109433018dup	NC_000004.12:g.109433016_109433018dup	NC_000004.12:g.109433015_109433018dup	NC_000004.12:g.109433014_109433018dup	NC_000004.12:g.109433013_109433018dup	NC_000004.12:g.109433010_109433018dup
GRCh37.p13 chr 4	NC_000004.11:g.110354157_110354174=	NC_000004.11:g.110354167_110354174del	NC_000004.11:g.110354170_110354174del	NC_000004.11:g.110354171_110354174del	NC_000004.11:g.110354172_110354174del	NC_000004.11:g.110354173_110354174del	NC_000004.11:g.110354174del	NC_000004.11:g.110354174dup	NC_000004.11:g.110354173_110354174dup	NC_000004.11:g.110354172_110354174dup	NC_000004.11:g.110354171_110354174dup	NC_000004.11:g.110354170_110354174dup	NC_000004.11:g.110354169_110354174dup	NC_000004.11:g.110354166_110354174dup
SEC24B RefSeqGene	NG_032166.1:g.4187_4204=	NG_032166.1:g.4197_4204del	NG_032166.1:g.4200_4204del	NG_032166.1:g.4201_4204del	NG_032166.1:g.4202_4204del	NG_032166.1:g.4203_4204del	NG_032166.1:g.4204del	NG_032166.1:g.4204dup	NG_032166.1:g.4203_4204dup	NG_032166.1:g.4202_4204dup	NG_032166.1:g.4201_4204dup	NG_032166.1:g.4200_4204dup	NG_032166.1:g.4199_4204dup	NG_032166.1:g.4196_4204dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

49 SubSNP, 26 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	HGSV	ss82328373	Dec 03, 2013 (144)
2	HUMANGENOME_JCVI	ss95365269	Dec 05, 2013 (144)
3	PJP	ss295182002	May 09, 2011 (137)
4	PJP	ss295182003	May 09, 2011 (137)
5	EVA_UK10K_ALSPAC	ss1704304282	Apr 01, 2015 (144)
6	EVA_UK10K_ALSPAC	ss1704304284	Apr 01, 2015 (144)
7	EVA_UK10K_TWINSUK	ss1704304336	Apr 01, 2015 (144)
8	EVA_UK10K_TWINSUK	ss1704304337	Apr 01, 2015 (144)
9	SWEGEN	ss2995322616	Nov 08, 2017 (151)
10	URBANLAB	ss3647815589	Oct 12, 2018 (152)
11	EVA_DECODE	ss3712790770	Jul 13, 2019 (153)
12	EVA_DECODE	ss3712790771	Jul 13, 2019 (153)
13	EVA_DECODE	ss3712790772	Jul 13, 2019 (153)
14	EVA_DECODE	ss3712790773	Jul 13, 2019 (153)
15	EVA_DECODE	ss3712790774	Jul 13, 2019 (153)
16	PACBIO	ss3784819579	Jul 13, 2019 (153)
17	EVA	ss3828736246	Apr 26, 2020 (154)
18	GNOMAD	ss4117954227	Apr 26, 2021 (155)
19	GNOMAD	ss4117954228	Apr 26, 2021 (155)
20	GNOMAD	ss4117954229	Apr 26, 2021 (155)
21	GNOMAD	ss4117954230	Apr 26, 2021 (155)
22	GNOMAD	ss4117954231	Apr 26, 2021 (155)
23	GNOMAD	ss4117954232	Apr 26, 2021 (155)
24	GNOMAD	ss4117954233	Apr 26, 2021 (155)
25	GNOMAD	ss4117954234	Apr 26, 2021 (155)
26	GNOMAD	ss4117954235	Apr 26, 2021 (155)
27	GNOMAD	ss4117954236	Apr 26, 2021 (155)
28	GNOMAD	ss4117954237	Apr 26, 2021 (155)
29	GNOMAD	ss4117954238	Apr 26, 2021 (155)
30	TOMMO_GENOMICS	ss5167377722	Apr 26, 2021 (155)
31	TOMMO_GENOMICS	ss5167377723	Apr 26, 2021 (155)
32	TOMMO_GENOMICS	ss5167377724	Apr 26, 2021 (155)
33	TOMMO_GENOMICS	ss5167377725	Apr 26, 2021 (155)
34	1000G_HIGH_COVERAGE	ss5260526121	Oct 13, 2022 (156)
35	1000G_HIGH_COVERAGE	ss5260526122	Oct 13, 2022 (156)
36	1000G_HIGH_COVERAGE	ss5260526123	Oct 13, 2022 (156)
37	1000G_HIGH_COVERAGE	ss5260526124	Oct 13, 2022 (156)
38	1000G_HIGH_COVERAGE	ss5260526125	Oct 13, 2022 (156)
39	HUGCELL_USP	ss5459142480	Oct 13, 2022 (156)
40	HUGCELL_USP	ss5459142481	Oct 13, 2022 (156)
41	HUGCELL_USP	ss5459142482	Oct 13, 2022 (156)
42	HUGCELL_USP	ss5459142483	Oct 13, 2022 (156)
43	TOMMO_GENOMICS	ss5702194154	Oct 13, 2022 (156)
44	TOMMO_GENOMICS	ss5702194156	Oct 13, 2022 (156)
45	TOMMO_GENOMICS	ss5702194157	Oct 13, 2022 (156)
46	TOMMO_GENOMICS	ss5702194158	Oct 13, 2022 (156)
47	EVA	ss5844516815	Oct 13, 2022 (156)
48	EVA	ss5844516816	Oct 13, 2022 (156)
49	EVA	ss5854382590	Oct 13, 2022 (156)
50	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 12635136 (NC_000004.11:110354156::A 2587/3854) Row 12635137 (NC_000004.11:110354156::AA 570/3854)	-	Oct 12, 2018 (152)
51	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 12635136 (NC_000004.11:110354156::A 2587/3854) Row 12635137 (NC_000004.11:110354156::AA 570/3854)	-	Oct 12, 2018 (152)
52	gnomAD - Genomes Submission ignored due to conflicting rows: Row 160867294 (NC_000004.12:109433000::A 55333/97172) Row 160867295 (NC_000004.12:109433000::AA 426/97222) Row 160867296 (NC_000004.12:109433000::AAA 6/97324)...	-	Apr 26, 2021 (155)
53	gnomAD - Genomes Submission ignored due to conflicting rows: Row 160867294 (NC_000004.12:109433000::A 55333/97172) Row 160867295 (NC_000004.12:109433000::AA 426/97222) Row 160867296 (NC_000004.12:109433000::AAA 6/97324)...	-	Apr 26, 2021 (155)
54	gnomAD - Genomes Submission ignored due to conflicting rows: Row 160867294 (NC_000004.12:109433000::A 55333/97172) Row 160867295 (NC_000004.12:109433000::AA 426/97222) Row 160867296 (NC_000004.12:109433000::AAA 6/97324)...	-	Apr 26, 2021 (155)
55	gnomAD - Genomes Submission ignored due to conflicting rows: Row 160867294 (NC_000004.12:109433000::A 55333/97172) Row 160867295 (NC_000004.12:109433000::AA 426/97222) Row 160867296 (NC_000004.12:109433000::AAA 6/97324)...	-	Apr 26, 2021 (155)
56	gnomAD - Genomes Submission ignored due to conflicting rows: Row 160867294 (NC_000004.12:109433000::A 55333/97172) Row 160867295 (NC_000004.12:109433000::AA 426/97222) Row 160867296 (NC_000004.12:109433000::AAA 6/97324)...	-	Apr 26, 2021 (155)
57	gnomAD - Genomes Submission ignored due to conflicting rows: Row 160867294 (NC_000004.12:109433000::A 55333/97172) Row 160867295 (NC_000004.12:109433000::AA 426/97222) Row 160867296 (NC_000004.12:109433000::AAA 6/97324)...	-	Apr 26, 2021 (155)
58	gnomAD - Genomes Submission ignored due to conflicting rows: Row 160867294 (NC_000004.12:109433000::A 55333/97172) Row 160867295 (NC_000004.12:109433000::AA 426/97222) Row 160867296 (NC_000004.12:109433000::AAA 6/97324)...	-	Apr 26, 2021 (155)
59	gnomAD - Genomes Submission ignored due to conflicting rows: Row 160867294 (NC_000004.12:109433000::A 55333/97172) Row 160867295 (NC_000004.12:109433000::AA 426/97222) Row 160867296 (NC_000004.12:109433000::AAA 6/97324)...	-	Apr 26, 2021 (155)
60	gnomAD - Genomes Submission ignored due to conflicting rows: Row 160867294 (NC_000004.12:109433000::A 55333/97172) Row 160867295 (NC_000004.12:109433000::AA 426/97222) Row 160867296 (NC_000004.12:109433000::AAA 6/97324)...	-	Apr 26, 2021 (155)
61	gnomAD - Genomes Submission ignored due to conflicting rows: Row 160867294 (NC_000004.12:109433000::A 55333/97172) Row 160867295 (NC_000004.12:109433000::AA 426/97222) Row 160867296 (NC_000004.12:109433000::AAA 6/97324)...	-	Apr 26, 2021 (155)
62	gnomAD - Genomes Submission ignored due to conflicting rows: Row 160867294 (NC_000004.12:109433000::A 55333/97172) Row 160867295 (NC_000004.12:109433000::AA 426/97222) Row 160867296 (NC_000004.12:109433000::AAA 6/97324)...	-	Apr 26, 2021 (155)
63	gnomAD - Genomes Submission ignored due to conflicting rows: Row 160867294 (NC_000004.12:109433000::A 55333/97172) Row 160867295 (NC_000004.12:109433000::AA 426/97222) Row 160867296 (NC_000004.12:109433000::AAA 6/97324)...	-	Apr 26, 2021 (155)
64	gnomAD - Genomes Submission ignored due to conflicting rows: Row 160867294 (NC_000004.12:109433000::A 55333/97172) Row 160867295 (NC_000004.12:109433000::AA 426/97222) Row 160867296 (NC_000004.12:109433000::AAA 6/97324)...	-	Apr 26, 2021 (155)
65	8.3KJPN Submission ignored due to conflicting rows: Row 25347029 (NC_000004.11:110354156::A 5154/16416) Row 25347030 (NC_000004.11:110354156:A: 14/16416) Row 25347031 (NC_000004.11:110354156::AA 39/16416)...	-	Apr 26, 2021 (155)
66	8.3KJPN Submission ignored due to conflicting rows: Row 25347029 (NC_000004.11:110354156::A 5154/16416) Row 25347030 (NC_000004.11:110354156:A: 14/16416) Row 25347031 (NC_000004.11:110354156::AA 39/16416)...	-	Apr 26, 2021 (155)
67	8.3KJPN Submission ignored due to conflicting rows: Row 25347029 (NC_000004.11:110354156::A 5154/16416) Row 25347030 (NC_000004.11:110354156:A: 14/16416) Row 25347031 (NC_000004.11:110354156::AA 39/16416)...	-	Apr 26, 2021 (155)
68	8.3KJPN Submission ignored due to conflicting rows: Row 25347029 (NC_000004.11:110354156::A 5154/16416) Row 25347030 (NC_000004.11:110354156:A: 14/16416) Row 25347031 (NC_000004.11:110354156::AA 39/16416)...	-	Apr 26, 2021 (155)
69	14KJPN Submission ignored due to conflicting rows: Row 36031258 (NC_000004.12:109433000::A 9473/28214) Row 36031260 (NC_000004.12:109433000:A: 22/28214) Row 36031261 (NC_000004.12:109433000::AA 57/28214)...	-	Oct 13, 2022 (156)
70	14KJPN Submission ignored due to conflicting rows: Row 36031258 (NC_000004.12:109433000::A 9473/28214) Row 36031260 (NC_000004.12:109433000:A: 22/28214) Row 36031261 (NC_000004.12:109433000::AA 57/28214)...	-	Oct 13, 2022 (156)
71	14KJPN Submission ignored due to conflicting rows: Row 36031258 (NC_000004.12:109433000::A 9473/28214) Row 36031260 (NC_000004.12:109433000:A: 22/28214) Row 36031261 (NC_000004.12:109433000::AA 57/28214)...	-	Oct 13, 2022 (156)
72	14KJPN Submission ignored due to conflicting rows: Row 36031258 (NC_000004.12:109433000::A 9473/28214) Row 36031260 (NC_000004.12:109433000:A: 22/28214) Row 36031261 (NC_000004.12:109433000::AA 57/28214)...	-	Oct 13, 2022 (156)
73	UK 10K study - Twins Submission ignored due to conflicting rows: Row 12635136 (NC_000004.11:110354156::A 2515/3708) Row 12635137 (NC_000004.11:110354156::AA 564/3708)	-	Oct 12, 2018 (152)
74	UK 10K study - Twins Submission ignored due to conflicting rows: Row 12635136 (NC_000004.11:110354156::A 2515/3708) Row 12635137 (NC_000004.11:110354156::AA 564/3708)	-	Oct 12, 2018 (152)
75	ALFA	NC_000004.12 - 109433001	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs57059686	May 11, 2012 (137)
rs139126939	May 11, 2012 (137)
rs149931394	Sep 17, 2011 (135)
rs397705042	Jul 01, 2015 (144)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss2995322616	NC_000004.11:110354156:AAAAAAAA:	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAA	(self)
ss4117954238, ss5260526124	NC_000004.12:109433000:AAAAAAAA:	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAA	(self)
5172204759	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAA	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAA	(self)
ss4117954237	NC_000004.12:109433000:AAAAA:	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
5172204759	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss5167377725	NC_000004.11:110354156:AAAA:	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss4117954236, ss5702194158	NC_000004.12:109433000:AAAA:	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
5172204759	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3712790774, ss4117954235	NC_000004.12:109433000:AAA:	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
5172204759	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss4117954234, ss5260526125, ss5459142483	NC_000004.12:109433000:AA:	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
5172204759	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss3712790773	NC_000004.12:109433001:AA:	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss3784819579, ss5167377723	NC_000004.11:110354156:A:	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss5260526122, ss5459142480, ss5702194156	NC_000004.12:109433000:A:	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
5172204759	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss3712790772	NC_000004.12:109433002:A:	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss295182002	NC_000004.10:110573606::A	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
ss295182003	NC_000004.10:110573623::A	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
ss1704304282, ss1704304336, ss3828736246, ss5167377722, ss5844516815	NC_000004.11:110354156::A	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
ss3647815589, ss4117954227, ss5260526121, ss5459142481, ss5702194154, ss5854382590	NC_000004.12:109433000::A	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
5172204759	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
ss3712790771	NC_000004.12:109433003::A	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
ss82328373, ss95365269	NT_016354.19:34901895::A	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
ss1704304284, ss1704304337, ss5167377724, ss5844516816	NC_000004.11:110354156::AA	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	(self)
ss4117954228, ss5260526123, ss5459142482, ss5702194157	NC_000004.12:109433000::AA	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	(self)
5172204759	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	(self)
ss3712790770	NC_000004.12:109433003::AA	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	(self)
ss4117954229	NC_000004.12:109433000::AAA	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA	(self)
5172204759	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA	(self)
ss4117954230	NC_000004.12:109433000::AAAA	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA	(self)
5172204759	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA	(self)
ss4117954231	NC_000004.12:109433000::AAAAA	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA	(self)
ss4117954232	NC_000004.12:109433000::AAAAAA	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA	(self)
ss4117954233	NC_000004.12:109433000::AAAAAAAAA	NC_000004.12:109433000:AAAAAAAAAAA… NC_000004.12:109433000:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs11369038

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs11369038