Name: rs1474558
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1474558

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr22:35294190 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: A>C / A>G / A>T
Variation Type: SNV Single Nucleotide Variation
Frequency: G=0.498300 (131895/264690, TOPMED)
A=0.496197 (69274/139610, GnomAD)
A=0.39345 (37971/96508, ALFA) (+ 19 more)
A=0.47218 (13343/28258, 14KJPN)
A=0.47416 (7947/16760, 8.3KJPN)
G=0.4647 (2976/6404, 1000G_30x)
G=0.4736 (2372/5008, 1000G)
A=0.3643 (1632/4480, Estonian)
A=0.3459 (1333/3854, ALSPAC)
A=0.3474 (1288/3708, TWINSUK)
A=0.4512 (1322/2930, KOREAN)
G=0.4165 (788/1892, HapMap)
A=0.4618 (846/1832, Korea1K)
A=0.356 (355/998, GoNL)
A=0.428 (257/600, NorthernSweden)
A=0.352 (188/534, MGP)
A=0.294 (117/398, SGDP_PRJ)
A=0.500 (108/216, Qatari)
G=0.500 (108/216, Qatari)
A=0.16 (10/62, Ancient Sardinia)
A=0.28 (14/50, Siberian)
A=0.40 (16/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: HMGXB4 : Non Coding Transcript Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	96508	A=0.39345	G=0.60655
European	Sub	80052	A=0.34655	G=0.65345
African	Sub	8738	A=0.8011	G=0.1989
African Others	Sub	308	A=0.896	G=0.104
African American	Sub	8430	A=0.7976	G=0.2024
Asian	Sub	324	A=0.475	G=0.525
East Asian	Sub	226	A=0.491	G=0.509
Other Asian	Sub	98	A=0.44	G=0.56
Latin American 1	Sub	636	A=0.487	G=0.513
Latin American 2	Sub	1998	A=0.4239	G=0.5761
South Asian	Sub	150	A=0.367	G=0.633
Other	Sub	4610	A=0.4041	G=0.5959

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	A=0.501700	G=0.498300
gnomAD - Genomes	Global	Study-wide	139610	A=0.496197	G=0.503803
gnomAD - Genomes	European	Sub	75560	A=0.35503	G=0.64497
gnomAD - Genomes	African	Sub	41912	A=0.78820	G=0.21180
gnomAD - Genomes	American	Sub	13572	A=0.44238	G=0.55762
gnomAD - Genomes	Ashkenazi Jewish	Sub	3314	A=0.3120	G=0.6880
gnomAD - Genomes	East Asian	Sub	3116	A=0.4535	G=0.5465
gnomAD - Genomes	Other	Sub	2136	A=0.4504	G=0.5496
Allele Frequency Aggregator	Total	Global	96508	A=0.39345	G=0.60655
Allele Frequency Aggregator	European	Sub	80052	A=0.34655	G=0.65345
Allele Frequency Aggregator	African	Sub	8738	A=0.8011	G=0.1989
Allele Frequency Aggregator	Other	Sub	4610	A=0.4041	G=0.5959
Allele Frequency Aggregator	Latin American 2	Sub	1998	A=0.4239	G=0.5761
Allele Frequency Aggregator	Latin American 1	Sub	636	A=0.487	G=0.513
Allele Frequency Aggregator	Asian	Sub	324	A=0.475	G=0.525
Allele Frequency Aggregator	South Asian	Sub	150	A=0.367	G=0.633
14KJPN	JAPANESE	Study-wide	28258	A=0.47218	G=0.52782
8.3KJPN	JAPANESE	Study-wide	16760	A=0.47416	G=0.52584
1000Genomes_30x	Global	Study-wide	6404	A=0.5353	G=0.4647
1000Genomes_30x	African	Sub	1786	A=0.8684	G=0.1316
1000Genomes_30x	Europe	Sub	1266	A=0.3499	G=0.6501
1000Genomes_30x	South Asian	Sub	1202	A=0.3985	G=0.6015
1000Genomes_30x	East Asian	Sub	1170	A=0.4769	G=0.5231
1000Genomes_30x	American	Sub	980	A=0.405	G=0.595
1000Genomes	Global	Study-wide	5008	A=0.5264	G=0.4736
1000Genomes	African	Sub	1322	A=0.8654	G=0.1346
1000Genomes	East Asian	Sub	1008	A=0.4752	G=0.5248
1000Genomes	Europe	Sub	1006	A=0.3419	G=0.6581
1000Genomes	South Asian	Sub	978	A=0.401	G=0.599
1000Genomes	American	Sub	694	A=0.399	G=0.601
Genetic variation in the Estonian population	Estonian	Study-wide	4480	A=0.3643	G=0.6357
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	A=0.3459	G=0.6541
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	A=0.3474	G=0.6526
KOREAN population from KRGDB	KOREAN	Study-wide	2930	A=0.4512	C=0.0000, G=0.5488, T=0.0000
HapMap	Global	Study-wide	1892	A=0.5835	G=0.4165
HapMap	American	Sub	770	A=0.417	G=0.583
HapMap	African	Sub	692	A=0.870	G=0.130
HapMap	Asian	Sub	254	A=0.476	G=0.524
HapMap	Europe	Sub	176	A=0.341	G=0.659
Korean Genome Project	KOREAN	Study-wide	1832	A=0.4618	G=0.5382
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	A=0.356	G=0.644
Northern Sweden	ACPOP	Study-wide	600	A=0.428	G=0.572
Medical Genome Project healthy controls from Spanish population	Spanish controls	Study-wide	534	A=0.352	G=0.648
SGDP_PRJ	Global	Study-wide	398	A=0.294	G=0.706
Qatari	Global	Study-wide	216	A=0.500	G=0.500
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	62	A=0.16	G=0.84
Siberian	Global	Study-wide	50	A=0.28	G=0.72
The Danish reference pan genome	Danish	Study-wide	40	A=0.40	G=0.60

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 22	NC_000022.11:g.35294190A>C
GRCh38.p14 chr 22	NC_000022.11:g.35294190A>G
GRCh38.p14 chr 22	NC_000022.11:g.35294190A>T
GRCh37.p13 chr 22	NC_000022.10:g.35690183A>C
GRCh37.p13 chr 22	NC_000022.10:g.35690183A>G
GRCh37.p13 chr 22	NC_000022.10:g.35690183A>T

Gene: HMGXB4, HMG-box containing 4 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
HMGXB4 transcript variant 1	NM_001003681.3:c.*539=	N/A	3 Prime UTR Variant
HMGXB4 transcript variant 3	NM_001362972.2:c.*539=	N/A	3 Prime UTR Variant
HMGXB4 transcript variant 2	NR_027780.2:n.2593A>C	N/A	Non Coding Transcript Variant
HMGXB4 transcript variant 2	NR_027780.2:n.2593A>G	N/A	Non Coding Transcript Variant
HMGXB4 transcript variant 2	NR_027780.2:n.2593A>T	N/A	Non Coding Transcript Variant
HMGXB4 transcript variant X1	XM_006724101.5:c.*539=	N/A	3 Prime UTR Variant
HMGXB4 transcript variant X2	XM_047441067.1:c.*539=	N/A	3 Prime UTR Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	A=	C	G	T
GRCh38.p14 chr 22	NC_000022.11:g.35294190=	NC_000022.11:g.35294190A>C	NC_000022.11:g.35294190A>G	NC_000022.11:g.35294190A>T
GRCh37.p13 chr 22	NC_000022.10:g.35690183=	NC_000022.10:g.35690183A>C	NC_000022.10:g.35690183A>G	NC_000022.10:g.35690183A>T
HMGXB4 transcript variant X1	XM_006724101.5:c.*539=	XM_006724101.5:c.*539A>C	XM_006724101.5:c.*539A>G	XM_006724101.5:c.*539A>T
HMGXB4 transcript variant X2	XM_006724101.4:c.*539=	XM_006724101.4:c.*539A>C	XM_006724101.4:c.*539A>G	XM_006724101.4:c.*539A>T
HMGXB4 transcript variant X2	XM_006724101.3:c.*539=	XM_006724101.3:c.*539A>C	XM_006724101.3:c.*539A>G	XM_006724101.3:c.*539A>T
HMGXB4 transcript variant X2	XM_006724101.2:c.*539=	XM_006724101.2:c.*539A>C	XM_006724101.2:c.*539A>G	XM_006724101.2:c.*539A>T
HMGXB4 transcript variant X2	XM_006724101.1:c.*539=	XM_006724101.1:c.*539A>C	XM_006724101.1:c.*539A>G	XM_006724101.1:c.*539A>T
HMGXB4 transcript variant 1	NM_005487.3:c.*539=	NM_005487.3:c.*539A>C	NM_005487.3:c.*539A>G	NM_005487.3:c.*539A>T
HMGXB4 transcript variant 1	NM_001003681.3:c.*539=	NM_001003681.3:c.*539A>C	NM_001003681.3:c.*539A>G	NM_001003681.3:c.*539A>T
HMGXB4 transcript variant 1	NM_001003681.2:c.*539=	NM_001003681.2:c.*539A>C	NM_001003681.2:c.*539A>G	NM_001003681.2:c.*539A>T
HMGXB4 transcript variant 2	NR_027780.2:n.2593=	NR_027780.2:n.2593A>C	NR_027780.2:n.2593A>G	NR_027780.2:n.2593A>T
HMGXB4 transcript variant 2	NR_027780.1:n.2634=	NR_027780.1:n.2634A>C	NR_027780.1:n.2634A>G	NR_027780.1:n.2634A>T
HMG2L1 transcript	NM_005487.2:c.*539=	NM_005487.2:c.*539A>C	NM_005487.2:c.*539A>G	NM_005487.2:c.*539A>T
HMGXB4 transcript variant 3	NM_001362972.2:c.*539=	NM_001362972.2:c.*539A>C	NM_001362972.2:c.*539A>G	NM_001362972.2:c.*539A>T
HMGXB4 transcript variant 3	NM_001362972.1:c.*539=	NM_001362972.1:c.*539A>C	NM_001362972.1:c.*539A>G	NM_001362972.1:c.*539A>T
HMGXB4 transcript variant X2	XM_047441067.1:c.*539=	XM_047441067.1:c.*539A>C	XM_047441067.1:c.*539A>G	XM_047441067.1:c.*539A>T
HMGXB4 transcript variant 2	NM_014250.1:c.*539=	NM_014250.1:c.*539A>C	NM_014250.1:c.*539A>G	NM_014250.1:c.*539A>T
HMG2L1 transcript	NM_005487.1:c.*539=	NM_005487.1:c.*539A>C	NM_005487.1:c.*539A>G	NM_005487.1:c.*539A>T

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

110 SubSNP, 21 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	TSC-CSHL	ss2295776	Oct 23, 2000 (88)
2	SC_JCM	ss5871460	Feb 20, 2003 (111)
3	SC_SNP	ss13357962	Dec 05, 2003 (119)
4	CSHL-HAPMAP	ss20144331	Feb 27, 2004 (120)
5	SSAHASNP	ss21864900	Apr 05, 2004 (121)
6	PERLEGEN	ss38338808	May 24, 2005 (125)
7	ABI	ss44324321	Mar 14, 2006 (126)
8	ILLUMINA	ss75053963	Dec 07, 2007 (129)
9	BCMHGSC_JDW	ss91917615	Mar 24, 2008 (129)
10	HUMANGENOME_JCVI	ss96099922	Feb 05, 2009 (130)
11	BGI	ss103861049	Dec 01, 2009 (131)
12	1000GENOMES	ss112635756	Jan 25, 2009 (130)
13	ILLUMINA-UK	ss117400368	Feb 14, 2009 (130)
14	KRIBB_YJKIM	ss119394457	Dec 01, 2009 (131)
15	ENSEMBL	ss138353496	Dec 01, 2009 (131)
16	ENSEMBL	ss143437551	Dec 01, 2009 (131)
17	GMI	ss157165042	Dec 01, 2009 (131)
18	ILLUMINA	ss160359092	Dec 01, 2009 (131)
19	COMPLETE_GENOMICS	ss167914965	Jul 04, 2010 (132)
20	COMPLETE_GENOMICS	ss169210078	Jul 04, 2010 (132)
21	ILLUMINA	ss172529302	Jul 04, 2010 (132)
22	BUSHMAN	ss204085058	Jul 04, 2010 (132)
23	BCM-HGSC-SUB	ss208835149	Jul 04, 2010 (132)
24	1000GENOMES	ss212118868	Jul 14, 2010 (132)
25	1000GENOMES	ss228675556	Jul 14, 2010 (132)
26	1000GENOMES	ss238066429	Jul 15, 2010 (132)
27	1000GENOMES	ss244185158	Jul 15, 2010 (132)
28	BL	ss255893812	May 09, 2011 (134)
29	GMI	ss283633145	May 04, 2012 (137)
30	GMI	ss287567939	Apr 25, 2013 (138)
31	ILLUMINA	ss479992109	May 04, 2012 (137)
32	ILLUMINA	ss480000818	May 04, 2012 (137)
33	ILLUMINA	ss480654077	Sep 08, 2015 (146)
34	ILLUMINA	ss484794194	May 04, 2012 (137)
35	ILLUMINA	ss536878168	Sep 08, 2015 (146)
36	TISHKOFF	ss566635589	Apr 25, 2013 (138)
37	SSMP	ss662566274	Apr 25, 2013 (138)
38	ILLUMINA	ss778808643	Sep 08, 2015 (146)
39	ILLUMINA	ss782843752	Sep 08, 2015 (146)
40	ILLUMINA	ss783808385	Sep 08, 2015 (146)
41	ILLUMINA	ss832097519	Sep 08, 2015 (146)
42	ILLUMINA	ss834268885	Sep 08, 2015 (146)
43	EVA-GONL	ss995344466	Aug 21, 2014 (142)
44	JMKIDD_LAB	ss1082653598	Aug 21, 2014 (142)
45	1000GENOMES	ss1367137835	Aug 21, 2014 (142)
46	DDI	ss1429254347	Apr 01, 2015 (144)
47	EVA_GENOME_DK	ss1579750465	Apr 01, 2015 (144)
48	EVA_UK10K_ALSPAC	ss1639980675	Apr 01, 2015 (144)
49	EVA_UK10K_TWINSUK	ss1682974708	Apr 01, 2015 (144)
50	EVA_DECODE	ss1699414779	Apr 01, 2015 (144)
51	EVA_MGP	ss1711567991	Apr 01, 2015 (144)
52	EVA_SVP	ss1713740716	Apr 01, 2015 (144)
53	ILLUMINA	ss1752420255	Sep 08, 2015 (146)
54	WEILL_CORNELL_DGM	ss1938910930	Feb 12, 2016 (147)
55	GENOMED	ss1969271537	Jul 19, 2016 (147)
56	JJLAB	ss2030227739	Sep 14, 2016 (149)
57	USC_VALOUEV	ss2158846244	Dec 20, 2016 (150)
58	HUMAN_LONGEVITY	ss2247273826	Dec 20, 2016 (150)
59	SYSTEMSBIOZJU	ss2629611600	Nov 08, 2017 (151)
60	ILLUMINA	ss2633877253	Nov 08, 2017 (151)
61	GRF	ss2704597802	Nov 08, 2017 (151)
62	GNOMAD	ss2974308746	Nov 08, 2017 (151)
63	SWEGEN	ss3019292876	Nov 08, 2017 (151)
64	BIOINF_KMB_FNS_UNIBA	ss3028951190	Nov 08, 2017 (151)
65	CSHL	ss3352834774	Nov 08, 2017 (151)
66	ILLUMINA	ss3628532381	Oct 12, 2018 (152)
67	ILLUMINA	ss3631828614	Oct 12, 2018 (152)
68	ILLUMINA	ss3633273042	Oct 12, 2018 (152)
69	ILLUMINA	ss3633988798	Oct 12, 2018 (152)
70	ILLUMINA	ss3634867316	Oct 12, 2018 (152)
71	ILLUMINA	ss3635673249	Oct 12, 2018 (152)
72	ILLUMINA	ss3636563166	Oct 12, 2018 (152)
73	ILLUMINA	ss3637425490	Oct 12, 2018 (152)
74	ILLUMINA	ss3638382179	Oct 12, 2018 (152)
75	ILLUMINA	ss3640574620	Oct 12, 2018 (152)
76	URBANLAB	ss3651178411	Oct 12, 2018 (152)
77	EGCUT_WGS	ss3685788742	Jul 13, 2019 (153)
78	EVA_DECODE	ss3708187477	Jul 13, 2019 (153)
79	ACPOP	ss3743928770	Jul 13, 2019 (153)
80	EVA	ss3759375168	Jul 13, 2019 (153)
81	PACBIO	ss3788825319	Jul 13, 2019 (153)
82	PACBIO	ss3793691272	Jul 13, 2019 (153)
83	PACBIO	ss3798577750	Jul 13, 2019 (153)
84	KHV_HUMAN_GENOMES	ss3822538955	Jul 13, 2019 (153)
85	EVA	ss3825969969	Apr 27, 2020 (154)
86	EVA	ss3835989038	Apr 27, 2020 (154)
87	EVA	ss3841622416	Apr 27, 2020 (154)
88	EVA	ss3847137398	Apr 27, 2020 (154)
89	SGDP_PRJ	ss3890532670	Apr 27, 2020 (154)
90	KRGDB	ss3940927664	Apr 27, 2020 (154)
91	KOGIC	ss3983629628	Apr 27, 2020 (154)
92	FSA-LAB	ss3984234766	Apr 26, 2021 (155)
93	EVA	ss3985917434	Apr 26, 2021 (155)
94	EVA	ss4017880366	Apr 26, 2021 (155)
95	TOPMED	ss5108994370	Apr 26, 2021 (155)
96	TOMMO_GENOMICS	ss5232595881	Apr 26, 2021 (155)
97	1000G_HIGH_COVERAGE	ss5311078050	Oct 16, 2022 (156)
98	EVA	ss5316056423	Oct 16, 2022 (156)
99	EVA	ss5441260265	Oct 16, 2022 (156)
100	HUGCELL_USP	ss5502922403	Oct 16, 2022 (156)
101	EVA	ss5512381033	Oct 16, 2022 (156)
102	1000G_HIGH_COVERAGE	ss5618623567	Oct 16, 2022 (156)
103	SANFORD_IMAGENETICS	ss5664481548	Oct 16, 2022 (156)
104	TOMMO_GENOMICS	ss5793705945	Oct 16, 2022 (156)
105	EVA	ss5800041120	Oct 16, 2022 (156)
106	YY_MCH	ss5818707846	Oct 16, 2022 (156)
107	EVA	ss5822063457	Oct 16, 2022 (156)
108	EVA	ss5853392148	Oct 16, 2022 (156)
109	EVA	ss5881795935	Oct 16, 2022 (156)
110	EVA	ss5959337018	Oct 16, 2022 (156)
111	1000Genomes	NC_000022.10 - 35690183	Oct 12, 2018 (152)
112	1000Genomes_30x	NC_000022.11 - 35294190	Oct 16, 2022 (156)
113	The Avon Longitudinal Study of Parents and Children	NC_000022.10 - 35690183	Oct 12, 2018 (152)
114	Genetic variation in the Estonian population	NC_000022.10 - 35690183	Oct 12, 2018 (152)
115	The Danish reference pan genome	NC_000022.10 - 35690183	Apr 27, 2020 (154)
116	gnomAD - Genomes	NC_000022.11 - 35294190	Apr 26, 2021 (155)
117	Genome of the Netherlands Release 5	NC_000022.10 - 35690183	Apr 27, 2020 (154)
118	HapMap	NC_000022.11 - 35294190	Apr 27, 2020 (154)
119	KOREAN population from KRGDB	NC_000022.10 - 35690183	Apr 27, 2020 (154)
120	Korean Genome Project	NC_000022.11 - 35294190	Apr 27, 2020 (154)
121	Medical Genome Project healthy controls from Spanish population	NC_000022.10 - 35690183	Apr 27, 2020 (154)
122	Northern Sweden	NC_000022.10 - 35690183	Jul 13, 2019 (153)
123	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000022.10 - 35690183	Apr 26, 2021 (155)
124	Qatari	NC_000022.10 - 35690183	Apr 27, 2020 (154)
125	SGDP_PRJ	NC_000022.10 - 35690183	Apr 27, 2020 (154)
126	Siberian	NC_000022.10 - 35690183	Apr 27, 2020 (154)
127	8.3KJPN	NC_000022.10 - 35690183	Apr 26, 2021 (155)
128	14KJPN	NC_000022.11 - 35294190	Oct 16, 2022 (156)
129	TopMed	NC_000022.11 - 35294190	Apr 26, 2021 (155)
130	UK 10K study - Twins	NC_000022.10 - 35690183	Oct 12, 2018 (152)
131	ALFA	NC_000022.11 - 35294190	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs3204670	Jul 03, 2002 (106)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
48105058, ss3940927664	NC_000022.10:35690182:A:C	NC_000022.11:35294189:A:C	(self)
ss91917615, ss112635756, ss117400368, ss167914965, ss169210078, ss204085058, ss208835149, ss212118868, ss255893812, ss283633145, ss287567939, ss479992109, ss1699414779, ss1713740716	NC_000022.9:34020182:A:G	NC_000022.11:35294189:A:G	(self)
80689005, 44633666, 31526990, 5915404, 19889263, 48105058, 683751, 17213635, 1143361, 20952852, 42549650, 11362598, 90565188, 44633666, ss228675556, ss238066429, ss244185158, ss480000818, ss480654077, ss484794194, ss536878168, ss566635589, ss662566274, ss778808643, ss782843752, ss783808385, ss832097519, ss834268885, ss995344466, ss1082653598, ss1367137835, ss1429254347, ss1579750465, ss1639980675, ss1682974708, ss1711567991, ss1752420255, ss1938910930, ss1969271537, ss2030227739, ss2158846244, ss2629611600, ss2633877253, ss2704597802, ss2974308746, ss3019292876, ss3352834774, ss3628532381, ss3631828614, ss3633273042, ss3633988798, ss3634867316, ss3635673249, ss3636563166, ss3637425490, ss3638382179, ss3640574620, ss3685788742, ss3743928770, ss3759375168, ss3788825319, ss3793691272, ss3798577750, ss3825969969, ss3835989038, ss3841622416, ss3890532670, ss3940927664, ss3984234766, ss3985917434, ss4017880366, ss5232595881, ss5316056423, ss5441260265, ss5512381033, ss5664481548, ss5800041120, ss5822063457, ss5959337018	NC_000022.10:35690182:A:G	NC_000022.11:35294189:A:G	(self)
106149502, 569788493, 2254494, 40007629, 127543049, 384103317, 11302794305, ss2247273826, ss3028951190, ss3651178411, ss3708187477, ss3822538955, ss3847137398, ss3983629628, ss5108994370, ss5311078050, ss5502922403, ss5618623567, ss5793705945, ss5818707846, ss5853392148, ss5881795935	NC_000022.11:35294189:A:G	NC_000022.11:35294189:A:G	(self)
ss13357962, ss20144331, ss21864900	NT_011520.9:15080751:A:G	NC_000022.11:35294189:A:G	(self)
ss2295776, ss5871460, ss38338808, ss44324321, ss75053963, ss96099922, ss103861049, ss119394457, ss138353496, ss143437551, ss157165042, ss160359092, ss172529302	NT_011520.12:15080751:A:G	NC_000022.11:35294189:A:G	(self)
48105058, ss3940927664	NC_000022.10:35690182:A:T	NC_000022.11:35294189:A:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs1474558

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs1474558