Name: rs157482
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs157482

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr4:16763304 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: A>G
Variation Type: SNV Single Nucleotide Variation
Frequency: A=0.199694 (52857/264690, TOPMED)
A=0.181506 (25433/140122, GnomAD)
A=0.10964 (5952/54288, ALFA) (+ 17 more)
A=0.41900 (11840/28258, 14KJPN)
A=0.41850 (7014/16760, 8.3KJPN)
A=0.2392 (1532/6404, 1000G_30x)
A=0.2362 (1183/5008, 1000G)
A=0.1000 (448/4480, Estonian)
A=0.0786 (303/3854, ALSPAC)
A=0.0787 (292/3708, TWINSUK)
A=0.3785 (1109/2930, KOREAN)
A=0.3663 (671/1832, Korea1K)
A=0.070 (70/998, GoNL)
A=0.112 (67/600, NorthernSweden)
A=0.177 (88/496, SGDP_PRJ)
A=0.242 (78/322, HapMap)
A=0.065 (14/216, Qatari)
A=0.315 (68/216, Vietnamese)
A=0.12 (6/52, Siberian)
A=0.05 (2/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: LDB2 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	54288	A=0.10964	G=0.89036
European	Sub	42690	A=0.07627	G=0.92373
African	Sub	5148	A=0.3405	G=0.6595
African Others	Sub	190	A=0.384	G=0.616
African American	Sub	4958	A=0.3388	G=0.6612
Asian	Sub	452	A=0.352	G=0.648
East Asian	Sub	386	A=0.347	G=0.653
Other Asian	Sub	66	A=0.38	G=0.62
Latin American 1	Sub	536	A=0.172	G=0.828
Latin American 2	Sub	918	A=0.283	G=0.717
South Asian	Sub	178	A=0.107	G=0.893
Other	Sub	4366	A=0.0946	G=0.9054

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	A=0.199694	G=0.800306
gnomAD - Genomes	Global	Study-wide	140122	A=0.181506	G=0.818494
gnomAD - Genomes	European	Sub	75940	A=0.08376	G=0.91624
gnomAD - Genomes	African	Sub	41950	A=0.33411	G=0.66589
gnomAD - Genomes	American	Sub	13634	A=0.24512	G=0.75488
gnomAD - Genomes	Ashkenazi Jewish	Sub	3322	A=0.0322	G=0.9678
gnomAD - Genomes	East Asian	Sub	3126	A=0.3752	G=0.6248
gnomAD - Genomes	Other	Sub	2150	A=0.2019	G=0.7981
Allele Frequency Aggregator	Total	Global	54288	A=0.10964	G=0.89036
Allele Frequency Aggregator	European	Sub	42690	A=0.07627	G=0.92373
Allele Frequency Aggregator	African	Sub	5148	A=0.3405	G=0.6595
Allele Frequency Aggregator	Other	Sub	4366	A=0.0946	G=0.9054
Allele Frequency Aggregator	Latin American 2	Sub	918	A=0.283	G=0.717
Allele Frequency Aggregator	Latin American 1	Sub	536	A=0.172	G=0.828
Allele Frequency Aggregator	Asian	Sub	452	A=0.352	G=0.648
Allele Frequency Aggregator	South Asian	Sub	178	A=0.107	G=0.893
14KJPN	JAPANESE	Study-wide	28258	A=0.41900	G=0.58100
8.3KJPN	JAPANESE	Study-wide	16760	A=0.41850	G=0.58150
1000Genomes_30x	Global	Study-wide	6404	A=0.2392	G=0.7608
1000Genomes_30x	African	Sub	1786	A=0.3600	G=0.6400
1000Genomes_30x	Europe	Sub	1266	A=0.0695	G=0.9305
1000Genomes_30x	South Asian	Sub	1202	A=0.0849	G=0.9151
1000Genomes_30x	East Asian	Sub	1170	A=0.3444	G=0.6556
1000Genomes_30x	American	Sub	980	A=0.302	G=0.698
1000Genomes	Global	Study-wide	5008	A=0.2362	G=0.7638
1000Genomes	African	Sub	1322	A=0.3608	G=0.6392
1000Genomes	East Asian	Sub	1008	A=0.3403	G=0.6597
1000Genomes	Europe	Sub	1006	A=0.0686	G=0.9314
1000Genomes	South Asian	Sub	978	A=0.085	G=0.915
1000Genomes	American	Sub	694	A=0.304	G=0.696
Genetic variation in the Estonian population	Estonian	Study-wide	4480	A=0.1000	G=0.9000
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	A=0.0786	G=0.9214
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	A=0.0787	G=0.9213
KOREAN population from KRGDB	KOREAN	Study-wide	2930	A=0.3785	G=0.6215
Korean Genome Project	KOREAN	Study-wide	1832	A=0.3663	G=0.6337
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	A=0.070	G=0.930
Northern Sweden	ACPOP	Study-wide	600	A=0.112	G=0.888
SGDP_PRJ	Global	Study-wide	496	A=0.177	G=0.823
HapMap	Global	Study-wide	322	A=0.242	G=0.758
HapMap	American	Sub	120	A=0.067	G=0.933
HapMap	African	Sub	114	A=0.342	G=0.658
HapMap	Asian	Sub	88	A=0.35	G=0.65
Qatari	Global	Study-wide	216	A=0.065	G=0.935
A Vietnamese Genetic Variation Database	Global	Study-wide	216	A=0.315	G=0.685
Siberian	Global	Study-wide	52	A=0.12	G=0.88
The Danish reference pan genome	Danish	Study-wide	40	A=0.05	G=0.95

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 4	NC_000004.12:g.16763304A>G
GRCh37.p13 chr 4	NC_000004.11:g.16764927A>G

Gene: LDB2, LIM domain binding 2 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LDB2 transcript variant 2	NM_001130834.3:c.133-4044… NM_001130834.3:c.133-4044T>C	N/A	Intron Variant
LDB2 transcript variant 1	NM_001290.5:c.133-4044T>C	N/A	Intron Variant
LDB2 transcript variant 3	NM_001304434.2:c.133-4044… NM_001304434.2:c.133-4044T>C	N/A	Intron Variant
LDB2 transcript variant 4	NM_001304435.2:c.133-4044… NM_001304435.2:c.133-4044T>C	N/A	Intron Variant
LDB2 transcript variant 5	NR_130734.2:n.	N/A	Intron Variant
LDB2 transcript variant X5	XM_005248197.5:c.133-4044… XM_005248197.5:c.133-4044T>C	N/A	Intron Variant
LDB2 transcript variant X1	XM_006713975.5:c.247-4044… XM_006713975.5:c.247-4044T>C	N/A	Intron Variant
LDB2 transcript variant X2	XM_006713976.5:c.247-4044… XM_006713976.5:c.247-4044T>C	N/A	Intron Variant
LDB2 transcript variant X3	XM_006713977.5:c.247-4044… XM_006713977.5:c.247-4044T>C	N/A	Intron Variant
LDB2 transcript variant X7	XM_006713982.5:c.247-4044… XM_006713982.5:c.247-4044T>C	N/A	Intron Variant
LDB2 transcript variant X9	XM_006713983.5:c.247-4044… XM_006713983.5:c.247-4044T>C	N/A	Intron Variant
LDB2 transcript variant X4	XM_017008812.3:c.247-4044… XM_017008812.3:c.247-4044T>C	N/A	Intron Variant
LDB2 transcript variant X6	XM_017008813.3:c.133-4044… XM_017008813.3:c.133-4044T>C	N/A	Intron Variant
LDB2 transcript variant X8	XM_017008815.3:c.247-4044… XM_017008815.3:c.247-4044T>C	N/A	Intron Variant
LDB2 transcript variant X10	XM_017008816.3:c.247-4044… XM_017008816.3:c.247-4044T>C	N/A	Intron Variant
LDB2 transcript variant X12	XM_017008818.2:c.4-4044T>C	N/A	Intron Variant
LDB2 transcript variant X13	XM_017008819.3:c.133-4044… XM_017008819.3:c.133-4044T>C	N/A	Intron Variant
LDB2 transcript variant X14	XM_017008820.3:c.133-4044… XM_017008820.3:c.133-4044T>C	N/A	Intron Variant
LDB2 transcript variant X15	XM_017008821.3:c.133-4044… XM_017008821.3:c.133-4044T>C	N/A	Intron Variant
LDB2 transcript variant X11	XM_024454278.2:c.133-4044… XM_024454278.2:c.133-4044T>C	N/A	Intron Variant
LDB2 transcript variant X18	XM_024454280.2:c.-240-404… XM_024454280.2:c.-240-4044T>C	N/A	Intron Variant
LDB2 transcript variant X17	XM_047416391.1:c.-240-404… XM_047416391.1:c.-240-4044T>C	N/A	Intron Variant
LDB2 transcript variant X16	XM_047416390.1:c.	N/A	Genic Upstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	A=	G
GRCh38.p14 chr 4	NC_000004.12:g.16763304=	NC_000004.12:g.16763304A>G
GRCh37.p13 chr 4	NC_000004.11:g.16764927=	NC_000004.11:g.16764927A>G
LDB2 transcript variant 2	NM_001130834.1:c.133-4044=	NM_001130834.1:c.133-4044T>C
LDB2 transcript variant 2	NM_001130834.3:c.133-4044=	NM_001130834.3:c.133-4044T>C
LDB2 transcript variant 1	NM_001290.3:c.133-4044=	NM_001290.3:c.133-4044T>C
LDB2 transcript variant 1	NM_001290.5:c.133-4044=	NM_001290.5:c.133-4044T>C
LDB2 transcript variant 3	NM_001304434.2:c.133-4044=	NM_001304434.2:c.133-4044T>C
LDB2 transcript variant 4	NM_001304435.2:c.133-4044=	NM_001304435.2:c.133-4044T>C
LDB2 transcript variant X1	XM_005248197.1:c.133-4044=	XM_005248197.1:c.133-4044T>C
LDB2 transcript variant X5	XM_005248197.5:c.133-4044=	XM_005248197.5:c.133-4044T>C
LDB2 transcript variant X2	XM_005248198.1:c.133-4044=	XM_005248198.1:c.133-4044T>C
LDB2 transcript variant X3	XM_005248199.1:c.106-4044=	XM_005248199.1:c.106-4044T>C
LDB2 transcript variant X4	XM_005248200.1:c.133-4044=	XM_005248200.1:c.133-4044T>C
LDB2 transcript variant X5	XM_005248201.1:c.133-4044=	XM_005248201.1:c.133-4044T>C
LDB2 transcript variant X6	XM_005248202.1:c.133-4044=	XM_005248202.1:c.133-4044T>C
LDB2 transcript variant X7	XM_005248203.1:c.133-4044=	XM_005248203.1:c.133-4044T>C
LDB2 transcript variant X8	XM_005248204.1:c.133-4044=	XM_005248204.1:c.133-4044T>C
LDB2 transcript variant X9	XM_005248205.1:c.-240-4044=	XM_005248205.1:c.-240-4044T>C
LDB2 transcript variant X11	XM_005248207.1:c.-85-4044=	XM_005248207.1:c.-85-4044T>C
LDB2 transcript variant X12	XM_005248208.1:c.133-4044=	XM_005248208.1:c.133-4044T>C
LDB2 transcript variant X1	XM_006713975.5:c.247-4044=	XM_006713975.5:c.247-4044T>C
LDB2 transcript variant X2	XM_006713976.5:c.247-4044=	XM_006713976.5:c.247-4044T>C
LDB2 transcript variant X3	XM_006713977.5:c.247-4044=	XM_006713977.5:c.247-4044T>C
LDB2 transcript variant X7	XM_006713982.5:c.247-4044=	XM_006713982.5:c.247-4044T>C
LDB2 transcript variant X9	XM_006713983.5:c.247-4044=	XM_006713983.5:c.247-4044T>C
LDB2 transcript variant X4	XM_017008812.3:c.247-4044=	XM_017008812.3:c.247-4044T>C
LDB2 transcript variant X6	XM_017008813.3:c.133-4044=	XM_017008813.3:c.133-4044T>C
LDB2 transcript variant X8	XM_017008815.3:c.247-4044=	XM_017008815.3:c.247-4044T>C
LDB2 transcript variant X10	XM_017008816.3:c.247-4044=	XM_017008816.3:c.247-4044T>C
LDB2 transcript variant X12	XM_017008818.2:c.4-4044=	XM_017008818.2:c.4-4044T>C
LDB2 transcript variant X13	XM_017008819.3:c.133-4044=	XM_017008819.3:c.133-4044T>C
LDB2 transcript variant X14	XM_017008820.3:c.133-4044=	XM_017008820.3:c.133-4044T>C
LDB2 transcript variant X15	XM_017008821.3:c.133-4044=	XM_017008821.3:c.133-4044T>C
LDB2 transcript variant X11	XM_024454278.2:c.133-4044=	XM_024454278.2:c.133-4044T>C
LDB2 transcript variant X18	XM_024454280.2:c.-240-4044=	XM_024454280.2:c.-240-4044T>C
LDB2 transcript variant X17	XM_047416391.1:c.-240-4044=	XM_047416391.1:c.-240-4044T>C

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

98 SubSNP, 20 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	KWOK	ss271904	Jul 12, 2000 (79)
2	KWOK	ss366727	Jul 12, 2000 (79)
3	SC_JCM	ss745374	Aug 11, 2000 (85)
4	KWOK	ss932569	Oct 04, 2000 (86)
5	KWOK	ss1024073	Oct 04, 2000 (86)
6	KWOK	ss1924958	Oct 18, 2000 (96)
7	KWOK	ss1962930	Oct 18, 2000 (96)
8	BCM_SSAHASNP	ss10112567	Jul 11, 2003 (116)
9	WI_SSAHASNP	ss14613576	Dec 05, 2003 (119)
10	CSHL-HAPMAP	ss19584943	Feb 27, 2004 (120)
11	PERLEGEN	ss23967430	Sep 20, 2004 (123)
12	ABI	ss44494395	Mar 14, 2006 (126)
13	KRIBB_YJKIM	ss80743756	Dec 15, 2007 (130)
14	HGSV	ss83269271	Dec 15, 2007 (130)
15	HUMANGENOME_JCVI	ss98805488	Feb 05, 2009 (130)
16	BGI	ss104044991	Dec 01, 2009 (131)
17	1000GENOMES	ss111857097	Jan 25, 2009 (130)
18	1000GENOMES	ss112955495	Jan 25, 2009 (130)
19	ILLUMINA-UK	ss116890917	Feb 14, 2009 (130)
20	ENSEMBL	ss143246765	Dec 01, 2009 (131)
21	GMI	ss156918014	Dec 01, 2009 (131)
22	ILLUMINA	ss160375504	Dec 01, 2009 (131)
23	COMPLETE_GENOMICS	ss161931338	Jul 04, 2010 (132)
24	COMPLETE_GENOMICS	ss163146842	Jul 04, 2010 (132)
25	COMPLETE_GENOMICS	ss166224371	Jul 04, 2010 (132)
26	BUSHMAN	ss198116902	Jul 04, 2010 (132)
27	BCM-HGSC-SUB	ss206262237	Jul 04, 2010 (132)
28	1000GENOMES	ss220768372	Jul 14, 2010 (132)
29	1000GENOMES	ss232279116	Jul 14, 2010 (132)
30	1000GENOMES	ss239595644	Jul 15, 2010 (132)
31	BL	ss252961637	May 09, 2011 (134)
32	GMI	ss277593449	May 04, 2012 (137)
33	GMI	ss284854965	Apr 25, 2013 (138)
34	PJP	ss293295531	May 09, 2011 (134)
35	ILLUMINA	ss480719399	Sep 08, 2015 (146)
36	ILLUMINA	ss483977473	May 04, 2012 (137)
37	ILLUMINA	ss484739003	May 04, 2012 (137)
38	ILLUMINA	ss536171021	Sep 08, 2015 (146)
39	TISHKOFF	ss557342267	Apr 25, 2013 (138)
40	SSMP	ss651106928	Apr 25, 2013 (138)
41	ILLUMINA	ss780479851	Aug 21, 2014 (142)
42	ILLUMINA	ss782432901	Aug 21, 2014 (142)
43	ILLUMINA	ss835970349	Aug 21, 2014 (142)
44	EVA-GONL	ss979816665	Aug 21, 2014 (142)
45	JMKIDD_LAB	ss1071312338	Aug 21, 2014 (142)
46	1000GENOMES	ss1308623686	Aug 21, 2014 (142)
47	DDI	ss1429789495	Apr 01, 2015 (144)
48	EVA_GENOME_DK	ss1580435558	Apr 01, 2015 (144)
49	EVA_DECODE	ss1589305516	Apr 01, 2015 (144)
50	EVA_UK10K_ALSPAC	ss1609510138	Apr 01, 2015 (144)
51	EVA_UK10K_TWINSUK	ss1652504171	Apr 01, 2015 (144)
52	HAMMER_LAB	ss1801069861	Sep 08, 2015 (146)
53	WEILL_CORNELL_DGM	ss1923054638	Feb 12, 2016 (147)
54	GENOMED	ss1969670520	Sep 14, 2016 (149)
55	JJLAB	ss2022100970	Sep 14, 2016 (149)
56	USC_VALOUEV	ss2150211450	Dec 20, 2016 (150)
57	HUMAN_LONGEVITY	ss2260790595	Dec 20, 2016 (150)
58	SYSTEMSBIOZJU	ss2625551638	Nov 08, 2017 (151)
59	ILLUMINA	ss2634087877	Nov 08, 2017 (151)
60	GRF	ss2705656155	Nov 08, 2017 (151)
61	GNOMAD	ss2806170779	Nov 08, 2017 (151)
62	SWEGEN	ss2994218972	Nov 08, 2017 (151)
63	BIOINF_KMB_FNS_UNIBA	ss3024819735	Nov 08, 2017 (151)
64	CSHL	ss3345568547	Nov 08, 2017 (151)
65	ILLUMINA	ss3628911987	Oct 12, 2018 (152)
66	ILLUMINA	ss3632026247	Oct 12, 2018 (152)
67	ILLUMINA	ss3636644424	Oct 12, 2018 (152)
68	ILLUMINA	ss3642320290	Oct 12, 2018 (152)
69	URBANLAB	ss3647663302	Oct 12, 2018 (152)
70	EGCUT_WGS	ss3662127442	Jul 13, 2019 (153)
71	EVA_DECODE	ss3711501107	Jul 13, 2019 (153)
72	ACPOP	ss3730898936	Jul 13, 2019 (153)
73	EVA	ss3761458373	Jul 13, 2019 (153)
74	PACBIO	ss3784632852	Jul 13, 2019 (153)
75	PACBIO	ss3790101730	Jul 13, 2019 (153)
76	PACBIO	ss3794976794	Jul 13, 2019 (153)
77	KHV_HUMAN_GENOMES	ss3804591454	Jul 13, 2019 (153)
78	EVA	ss3828394902	Apr 26, 2020 (154)
79	EVA	ss3837631075	Apr 26, 2020 (154)
80	EVA	ss3843065287	Apr 26, 2020 (154)
81	SGDP_PRJ	ss3858324473	Apr 26, 2020 (154)
82	KRGDB	ss3904475125	Apr 26, 2020 (154)
83	KOGIC	ss3953621205	Apr 26, 2020 (154)
84	TOPMED	ss4604463185	Apr 26, 2021 (155)
85	TOMMO_GENOMICS	ss5164416691	Apr 26, 2021 (155)
86	1000G_HIGH_COVERAGE	ss5258213559	Oct 13, 2022 (156)
87	EVA	ss5314939177	Oct 13, 2022 (156)
88	EVA	ss5347212575	Oct 13, 2022 (156)
89	HUGCELL_USP	ss5457094371	Oct 13, 2022 (156)
90	1000G_HIGH_COVERAGE	ss5538735312	Oct 13, 2022 (156)
91	SANFORD_IMAGENETICS	ss5634447394	Oct 13, 2022 (156)
92	TOMMO_GENOMICS	ss5698125847	Oct 13, 2022 (156)
93	YY_MCH	ss5804800991	Oct 13, 2022 (156)
94	EVA	ss5843618117	Oct 13, 2022 (156)
95	EVA	ss5854099772	Oct 13, 2022 (156)
96	EVA	ss5862337541	Oct 13, 2022 (156)
97	EVA	ss5962826007	Oct 13, 2022 (156)
98	EVA	ss5980210190	Oct 13, 2022 (156)
99	1000Genomes	NC_000004.11 - 16764927	Oct 12, 2018 (152)
100	1000Genomes_30x	NC_000004.12 - 16763304	Oct 13, 2022 (156)
101	The Avon Longitudinal Study of Parents and Children	NC_000004.11 - 16764927	Oct 12, 2018 (152)
102	Genetic variation in the Estonian population	NC_000004.11 - 16764927	Oct 12, 2018 (152)
103	The Danish reference pan genome	NC_000004.11 - 16764927	Apr 26, 2020 (154)
104	gnomAD - Genomes	NC_000004.12 - 16763304	Apr 26, 2021 (155)
105	Genome of the Netherlands Release 5	NC_000004.11 - 16764927	Apr 26, 2020 (154)
106	HapMap	NC_000004.12 - 16763304	Apr 26, 2020 (154)
107	KOREAN population from KRGDB	NC_000004.11 - 16764927	Apr 26, 2020 (154)
108	Korean Genome Project	NC_000004.12 - 16763304	Apr 26, 2020 (154)
109	Northern Sweden	NC_000004.11 - 16764927	Jul 13, 2019 (153)
110	Qatari	NC_000004.11 - 16764927	Apr 26, 2020 (154)
111	SGDP_PRJ	NC_000004.11 - 16764927	Apr 26, 2020 (154)
112	Siberian	NC_000004.11 - 16764927	Apr 26, 2020 (154)
113	8.3KJPN	NC_000004.11 - 16764927	Apr 26, 2021 (155)
114	14KJPN	NC_000004.12 - 16763304	Oct 13, 2022 (156)
115	TopMed	NC_000004.12 - 16763304	Apr 26, 2021 (155)
116	UK 10K study - Twins	NC_000004.11 - 16764927	Oct 12, 2018 (152)
117	A Vietnamese Genetic Variation Database	NC_000004.11 - 16764927	Jul 13, 2019 (153)
118	ALFA	NC_000004.12 - 16763304	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs573988	Sep 19, 2000 (85)
rs1257985	Jun 15, 2001 (96)
rs1267297	Jun 15, 2001 (96)
rs59088836	May 25, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss83269271	NC_000004.9:16441195:A:G	NC_000004.12:16763303:A:G	(self)
ss111857097, ss112955495, ss116890917, ss160375504, ss161931338, ss163146842, ss166224371, ss198116902, ss206262237, ss252961637, ss277593449, ss284854965, ss293295531, ss484739003, ss1589305516	NC_000004.10:16374024:A:G	NC_000004.12:16763303:A:G	(self)
19977814, 11126510, 7865690, 6600497, 4896251, 11652519, 4183801, 5096568, 10341453, 2727804, 22385998, 11126510, 2431801, ss220768372, ss232279116, ss239595644, ss480719399, ss483977473, ss536171021, ss557342267, ss651106928, ss780479851, ss782432901, ss835970349, ss979816665, ss1071312338, ss1308623686, ss1429789495, ss1580435558, ss1609510138, ss1652504171, ss1801069861, ss1923054638, ss1969670520, ss2022100970, ss2150211450, ss2625551638, ss2634087877, ss2705656155, ss2806170779, ss2994218972, ss3345568547, ss3628911987, ss3632026247, ss3636644424, ss3642320290, ss3662127442, ss3730898936, ss3761458373, ss3784632852, ss3790101730, ss3794976794, ss3828394902, ss3837631075, ss3858324473, ss3904475125, ss5164416691, ss5314939177, ss5347212575, ss5634447394, ss5843618117, ss5962826007, ss5980210190	NC_000004.11:16764926:A:G	NC_000004.12:16763303:A:G	(self)
26261247, 141602300, 2565528, 9999206, 31962951, 441840741, 14486229483, ss2260790595, ss3024819735, ss3647663302, ss3711501107, ss3804591454, ss3843065287, ss3953621205, ss4604463185, ss5258213559, ss5457094371, ss5538735312, ss5698125847, ss5804800991, ss5854099772, ss5862337541	NC_000004.12:16763303:A:G	NC_000004.12:16763303:A:G	(self)
ss10112567, ss14613576, ss19584943	NT_006316.15:7440284:A:G	NC_000004.12:16763303:A:G	(self)
ss271904, ss366727, ss745374, ss932569, ss1024073, ss1924958, ss1962930, ss23967430, ss44494395, ss80743756, ss98805488, ss104044991, ss143246765, ss156918014	NT_006316.16:7946723:A:G	NC_000004.12:16763303:A:G	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs157482

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs157482