Name: rs163233
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs163233

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr5:34859120 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: G>A
Variation Type: SNV Single Nucleotide Variation
Frequency: A=0.373766 (98932/264690, TOPMED)
A=0.368971 (51622/139908, GnomAD)
A=0.32461 (21528/66320, ALFA) (+ 19 more)
A=0.15599 (4408/28258, 14KJPN)
A=0.15692 (2630/16760, 8.3KJPN)
A=0.3556 (2277/6404, 1000G_30x)
A=0.3530 (1768/5008, 1000G)
A=0.3038 (1361/4480, Estonian)
A=0.3293 (1269/3854, ALSPAC)
A=0.3004 (1114/3708, TWINSUK)
A=0.2043 (597/2922, KOREAN)
A=0.3033 (632/2084, HGDP_Stanford)
A=0.3817 (710/1860, HapMap)
A=0.1889 (346/1832, Korea1K)
A=0.308 (307/998, GoNL)
A=0.387 (232/600, NorthernSweden)
G=0.389 (112/288, SGDP_PRJ)
A=0.435 (94/216, Qatari)
A=0.271 (57/210, Vietnamese)
A=0.29 (24/82, Ancient Sardinia)
A=0.25 (10/40, GENOME_DK)
G=0.33 (6/18, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: TTC23L : Intron Variant
LOC124900959 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	66320	G=0.67539	A=0.32461
European	Sub	53862	G=0.68889	A=0.31111
African	Sub	4480	G=0.5020	A=0.4980
African Others	Sub	170	G=0.453	A=0.547
African American	Sub	4310	G=0.5039	A=0.4961
Asian	Sub	180	G=0.700	A=0.300
East Asian	Sub	142	G=0.754	A=0.246
Other Asian	Sub	38	G=0.50	A=0.50
Latin American 1	Sub	250	G=0.700	A=0.300
Latin American 2	Sub	1226	G=0.6591	A=0.3409
South Asian	Sub	4932	G=0.6993	A=0.3007
Other	Sub	1390	G=0.6331	A=0.3669

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	G=0.626234	A=0.373766
gnomAD - Genomes	Global	Study-wide	139908	G=0.631029	A=0.368971
gnomAD - Genomes	European	Sub	75816	G=0.69803	A=0.30197
gnomAD - Genomes	African	Sub	41864	G=0.48877	A=0.51123
gnomAD - Genomes	American	Sub	13628	G=0.65916	A=0.34084
gnomAD - Genomes	Ashkenazi Jewish	Sub	3322	G=0.6677	A=0.3323
gnomAD - Genomes	East Asian	Sub	3130	G=0.7470	A=0.2530
gnomAD - Genomes	Other	Sub	2148	G=0.6345	A=0.3655
Allele Frequency Aggregator	Total	Global	66320	G=0.67539	A=0.32461
Allele Frequency Aggregator	European	Sub	53862	G=0.68889	A=0.31111
Allele Frequency Aggregator	South Asian	Sub	4932	G=0.6993	A=0.3007
Allele Frequency Aggregator	African	Sub	4480	G=0.5020	A=0.4980
Allele Frequency Aggregator	Other	Sub	1390	G=0.6331	A=0.3669
Allele Frequency Aggregator	Latin American 2	Sub	1226	G=0.6591	A=0.3409
Allele Frequency Aggregator	Latin American 1	Sub	250	G=0.700	A=0.300
Allele Frequency Aggregator	Asian	Sub	180	G=0.700	A=0.300
14KJPN	JAPANESE	Study-wide	28258	G=0.84401	A=0.15599
8.3KJPN	JAPANESE	Study-wide	16760	G=0.84308	A=0.15692
1000Genomes_30x	Global	Study-wide	6404	G=0.6444	A=0.3556
1000Genomes_30x	African	Sub	1786	G=0.4966	A=0.5034
1000Genomes_30x	Europe	Sub	1266	G=0.6651	A=0.3349
1000Genomes_30x	South Asian	Sub	1202	G=0.6897	A=0.3103
1000Genomes_30x	East Asian	Sub	1170	G=0.7513	A=0.2487
1000Genomes_30x	American	Sub	980	G=0.704	A=0.296
1000Genomes	Global	Study-wide	5008	G=0.6470	A=0.3530
1000Genomes	African	Sub	1322	G=0.4864	A=0.5136
1000Genomes	East Asian	Sub	1008	G=0.7609	A=0.2391
1000Genomes	Europe	Sub	1006	G=0.6620	A=0.3380
1000Genomes	South Asian	Sub	978	G=0.693	A=0.307
1000Genomes	American	Sub	694	G=0.700	A=0.300
Genetic variation in the Estonian population	Estonian	Study-wide	4480	G=0.6962	A=0.3038
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.6707	A=0.3293
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.6996	A=0.3004
KOREAN population from KRGDB	KOREAN	Study-wide	2922	G=0.7957	A=0.2043
HGDP-CEPH-db Supplement 1	Global	Study-wide	2084	G=0.6967	A=0.3033
HGDP-CEPH-db Supplement 1	Est_Asia	Sub	470	G=0.813	A=0.187
HGDP-CEPH-db Supplement 1	Central_South_Asia	Sub	414	G=0.727	A=0.273
HGDP-CEPH-db Supplement 1	Middle_Est	Sub	350	G=0.600	A=0.400
HGDP-CEPH-db Supplement 1	Europe	Sub	320	G=0.694	A=0.306
HGDP-CEPH-db Supplement 1	Africa	Sub	242	G=0.550	A=0.450
HGDP-CEPH-db Supplement 1	America	Sub	216	G=0.657	A=0.343
HGDP-CEPH-db Supplement 1	Oceania	Sub	72	G=0.86	A=0.14
HapMap	Global	Study-wide	1860	G=0.6183	A=0.3817
HapMap	American	Sub	756	G=0.679	A=0.321
HapMap	African	Sub	682	G=0.472	A=0.528
HapMap	Asian	Sub	246	G=0.829	A=0.171
HapMap	Europe	Sub	176	G=0.631	A=0.369
Korean Genome Project	KOREAN	Study-wide	1832	G=0.8111	A=0.1889
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	G=0.692	A=0.308
Northern Sweden	ACPOP	Study-wide	600	G=0.613	A=0.387
SGDP_PRJ	Global	Study-wide	288	G=0.389	A=0.611
Qatari	Global	Study-wide	216	G=0.565	A=0.435
A Vietnamese Genetic Variation Database	Global	Study-wide	210	G=0.729	A=0.271
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	82	G=0.71	A=0.29
The Danish reference pan genome	Danish	Study-wide	40	G=0.75	A=0.25
Siberian	Global	Study-wide	18	G=0.33	A=0.67

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 5	NC_000005.10:g.34859120G>A
GRCh37.p13 chr 5	NC_000005.9:g.34859225G>A

Gene: TTC23L, tetratricopeptide repeat domain 23 like (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
TTC23L transcript variant 1	NM_001317949.2:c.407-3778… NM_001317949.2:c.407-3778G>A	N/A	Intron Variant
TTC23L transcript variant 3	NM_001386169.1:c.380-3778… NM_001386169.1:c.380-3778G>A	N/A	Intron Variant
TTC23L transcript variant 4	NM_001386170.1:c.380-3778… NM_001386170.1:c.380-3778G>A	N/A	Intron Variant
TTC23L transcript variant 5	NM_001386171.1:c.407-3778… NM_001386171.1:c.407-3778G>A	N/A	Intron Variant
TTC23L transcript variant 6	NM_001386172.1:c.380-3778… NM_001386172.1:c.380-3778G>A	N/A	Intron Variant
TTC23L transcript variant 2	NM_144725.4:c.380-3778G>A	N/A	Intron Variant
TTC23L transcript variant 7	NR_169874.1:n.	N/A	Intron Variant
TTC23L transcript variant 8	NR_169875.1:n.	N/A	Intron Variant
TTC23L transcript variant 9	NR_169876.1:n.	N/A	Intron Variant
TTC23L transcript variant X1	XM_011513984.4:c.380-3778… XM_011513984.4:c.380-3778G>A	N/A	Intron Variant
TTC23L transcript variant X7	XM_011513985.3:c.380-3778… XM_011513985.3:c.380-3778G>A	N/A	Intron Variant
TTC23L transcript variant X10	XM_011513987.4:c.380-3778… XM_011513987.4:c.380-3778G>A	N/A	Intron Variant
TTC23L transcript variant X3	XM_017009119.3:c.407-3778… XM_017009119.3:c.407-3778G>A	N/A	Intron Variant
TTC23L transcript variant X4	XM_017009120.3:c.380-3778… XM_017009120.3:c.380-3778G>A	N/A	Intron Variant
TTC23L transcript variant X5	XM_017009121.3:c.380-3778… XM_017009121.3:c.380-3778G>A	N/A	Intron Variant
TTC23L transcript variant X6	XM_017009122.3:c.380-3778… XM_017009122.3:c.380-3778G>A	N/A	Intron Variant
TTC23L transcript variant X8	XM_017009123.3:c.380-3778… XM_017009123.3:c.380-3778G>A	N/A	Intron Variant
TTC23L transcript variant X9	XM_017009124.3:c.92-3778G… XM_017009124.3:c.92-3778G>A	N/A	Intron Variant
TTC23L transcript variant X13	XM_017009126.3:c.32-3778G… XM_017009126.3:c.32-3778G>A	N/A	Intron Variant
TTC23L transcript variant X2	XM_047416824.1:c.380-3778… XM_047416824.1:c.380-3778G>A	N/A	Intron Variant
TTC23L transcript variant X11	XM_047416825.1:c.407-3778… XM_047416825.1:c.407-3778G>A	N/A	Intron Variant
TTC23L transcript variant X12	XM_047416826.1:c.380-3778… XM_047416826.1:c.380-3778G>A	N/A	Intron Variant

Gene: LOC124900959, uncharacterized LOC124900959 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LOC124900959 transcript	XR_007058729.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	G=	A
GRCh38.p14 chr 5	NC_000005.10:g.34859120=	NC_000005.10:g.34859120G>A
GRCh37.p13 chr 5	NC_000005.9:g.34859225=	NC_000005.9:g.34859225G>A
TTC23L transcript variant 1	NM_001317949.2:c.407-3778=	NM_001317949.2:c.407-3778G>A
TTC23L transcript variant 3	NM_001386169.1:c.380-3778=	NM_001386169.1:c.380-3778G>A
TTC23L transcript variant 4	NM_001386170.1:c.380-3778=	NM_001386170.1:c.380-3778G>A
TTC23L transcript variant 5	NM_001386171.1:c.407-3778=	NM_001386171.1:c.407-3778G>A
TTC23L transcript variant 6	NM_001386172.1:c.380-3778=	NM_001386172.1:c.380-3778G>A
TTC23L transcript variant 2	NM_144725.3:c.380-3778=	NM_144725.3:c.380-3778G>A
TTC23L transcript variant 2	NM_144725.4:c.380-3778=	NM_144725.4:c.380-3778G>A
TTC23L transcript variant X1	XM_005248258.1:c.407-3778=	XM_005248258.1:c.407-3778G>A
TTC23L transcript variant X2	XM_005248259.1:c.407-3778=	XM_005248259.1:c.407-3778G>A
TTC23L transcript variant X1	XM_011513984.4:c.380-3778=	XM_011513984.4:c.380-3778G>A
TTC23L transcript variant X7	XM_011513985.3:c.380-3778=	XM_011513985.3:c.380-3778G>A
TTC23L transcript variant X10	XM_011513987.4:c.380-3778=	XM_011513987.4:c.380-3778G>A
TTC23L transcript variant X3	XM_017009119.3:c.407-3778=	XM_017009119.3:c.407-3778G>A
TTC23L transcript variant X4	XM_017009120.3:c.380-3778=	XM_017009120.3:c.380-3778G>A
TTC23L transcript variant X5	XM_017009121.3:c.380-3778=	XM_017009121.3:c.380-3778G>A
TTC23L transcript variant X6	XM_017009122.3:c.380-3778=	XM_017009122.3:c.380-3778G>A
TTC23L transcript variant X8	XM_017009123.3:c.380-3778=	XM_017009123.3:c.380-3778G>A
TTC23L transcript variant X9	XM_017009124.3:c.92-3778=	XM_017009124.3:c.92-3778G>A
TTC23L transcript variant X13	XM_017009126.3:c.32-3778=	XM_017009126.3:c.32-3778G>A
TTC23L transcript variant X2	XM_047416824.1:c.380-3778=	XM_047416824.1:c.380-3778G>A
TTC23L transcript variant X11	XM_047416825.1:c.407-3778=	XM_047416825.1:c.407-3778G>A
TTC23L transcript variant X12	XM_047416826.1:c.380-3778=	XM_047416826.1:c.380-3778G>A

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

106 SubSNP, 22 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	KWOK	ss301896	Jul 12, 2000 (79)
2	KWOK	ss431153	Jul 12, 2000 (79)
3	SC_JCM	ss627857	Jul 16, 2000 (80)
4	KWOK	ss912565	Oct 04, 2000 (86)
5	KWOK	ss1013325	Oct 04, 2000 (86)
6	KWOK	ss1695599	Oct 18, 2000 (87)
7	KWOK	ss1734280	Oct 18, 2000 (87)
8	WI_SSAHASNP	ss6479481	Feb 20, 2003 (111)
9	WI_SSAHASNP	ss14659515	Dec 05, 2003 (119)
10	SC_SNP	ss14838843	Dec 05, 2003 (119)
11	SSAHASNP	ss22297964	Apr 05, 2004 (121)
12	ABI	ss44586656	Mar 13, 2006 (126)
13	ILLUMINA	ss66831037	Dec 01, 2006 (127)
14	ILLUMINA	ss67143160	Dec 01, 2006 (127)
15	ILLUMINA	ss67484491	Dec 01, 2006 (127)
16	ILLUMINA	ss70446852	May 18, 2007 (127)
17	ILLUMINA	ss70637545	May 26, 2008 (130)
18	ILLUMINA	ss71188404	May 18, 2007 (127)
19	ILLUMINA	ss75894743	Dec 06, 2007 (129)
20	HGSV	ss81304384	Dec 16, 2007 (130)
21	KRIBB_YJKIM	ss83373036	Dec 16, 2007 (130)
22	HUMANGENOME_JCVI	ss98712899	Feb 06, 2009 (130)
23	BGI	ss105918999	Feb 06, 2009 (130)
24	1000GENOMES	ss108952946	Jan 23, 2009 (130)
25	ILLUMINA-UK	ss116564287	Feb 14, 2009 (130)
26	ILLUMINA	ss121768834	Dec 01, 2009 (131)
27	ENSEMBL	ss143993715	Dec 01, 2009 (131)
28	ILLUMINA	ss153540951	Dec 01, 2009 (131)
29	GMI	ss155291921	Dec 01, 2009 (131)
30	ILLUMINA	ss159290102	Dec 01, 2009 (131)
31	COMPLETE_GENOMICS	ss162166651	Jul 04, 2010 (132)
32	ILLUMINA	ss170694041	Jul 04, 2010 (132)
33	ILLUMINA	ss172606208	Jul 04, 2010 (132)
34	BUSHMAN	ss200104804	Jul 04, 2010 (132)
35	BCM-HGSC-SUB	ss207127837	Jul 04, 2010 (132)
36	1000GENOMES	ss221619176	Jul 14, 2010 (132)
37	1000GENOMES	ss232901086	Jul 14, 2010 (132)
38	1000GENOMES	ss240084216	Jul 15, 2010 (132)
39	GMI	ss278242505	May 04, 2012 (137)
40	GMI	ss285155237	Apr 25, 2013 (138)
41	PJP	ss293566532	May 09, 2011 (134)
42	ILLUMINA	ss536902789	Sep 08, 2015 (146)
43	TISHKOFF	ss558318561	Apr 25, 2013 (138)
44	SSMP	ss652173714	Apr 25, 2013 (138)
45	ILLUMINA	ss825415585	Apr 01, 2015 (144)
46	ILLUMINA	ss832802218	Jul 13, 2019 (153)
47	EVA-GONL	ss981437155	Aug 21, 2014 (142)
48	JMKIDD_LAB	ss1072535042	Aug 21, 2014 (142)
49	1000GENOMES	ss1314607208	Aug 21, 2014 (142)
50	DDI	ss1430305734	Apr 01, 2015 (144)
51	EVA_GENOME_DK	ss1581089851	Apr 01, 2015 (144)
52	EVA_DECODE	ss1590959368	Apr 01, 2015 (144)
53	EVA_UK10K_ALSPAC	ss1612636839	Apr 01, 2015 (144)
54	EVA_UK10K_TWINSUK	ss1655630872	Apr 01, 2015 (144)
55	EVA_SVP	ss1712756353	Apr 01, 2015 (144)
56	HAMMER_LAB	ss1803347830	Sep 08, 2015 (146)
57	WEILL_CORNELL_DGM	ss1924700229	Feb 12, 2016 (147)
58	GENOMED	ss1970061544	Jul 19, 2016 (147)
59	JJLAB	ss2022952748	Sep 14, 2016 (149)
60	ILLUMINA	ss2095154196	Dec 20, 2016 (150)
61	USC_VALOUEV	ss2151103382	Dec 20, 2016 (150)
62	HUMAN_LONGEVITY	ss2272794407	Dec 20, 2016 (150)
63	SYSTEMSBIOZJU	ss2625976774	Nov 08, 2017 (151)
64	GRF	ss2706639549	Nov 08, 2017 (151)
65	GNOMAD	ss2823159834	Nov 08, 2017 (151)
66	SWEGEN	ss2996725650	Nov 08, 2017 (151)
67	BIOINF_KMB_FNS_UNIBA	ss3025261713	Nov 08, 2017 (151)
68	CSHL	ss3346331678	Nov 08, 2017 (151)
69	ILLUMINA	ss3629212604	Oct 12, 2018 (152)
70	ILLUMINA	ss3638547395	Oct 12, 2018 (152)
71	ILLUMINA	ss3639276496	Oct 12, 2018 (152)
72	ILLUMINA	ss3639661257	Oct 12, 2018 (152)
73	ILLUMINA	ss3643493897	Oct 12, 2018 (152)
74	URBANLAB	ss3648030952	Oct 12, 2018 (152)
75	ILLUMINA	ss3652973847	Oct 12, 2018 (152)
76	EGCUT_WGS	ss3664618239	Jul 13, 2019 (153)
77	EVA_DECODE	ss3714452855	Jul 13, 2019 (153)
78	ACPOP	ss3732250655	Jul 13, 2019 (153)
79	EVA	ss3763283923	Jul 13, 2019 (153)
80	PACBIO	ss3785079845	Jul 13, 2019 (153)
81	PACBIO	ss3790491253	Jul 13, 2019 (153)
82	PACBIO	ss3795367685	Jul 13, 2019 (153)
83	KHV_HUMAN_GENOMES	ss3806459845	Jul 13, 2019 (153)
84	EVA	ss3829188594	Apr 26, 2020 (154)
85	EVA	ss3838063603	Apr 26, 2020 (154)
86	EVA	ss3843502834	Apr 26, 2020 (154)
87	HGDP	ss3847787093	Apr 26, 2020 (154)
88	SGDP_PRJ	ss3861598125	Apr 26, 2020 (154)
89	KRGDB	ss3908069415	Apr 26, 2020 (154)
90	KOGIC	ss3956415512	Apr 26, 2020 (154)
91	EVA	ss3985134594	Apr 26, 2021 (155)
92	EVA	ss4017201293	Apr 26, 2021 (155)
93	TOPMED	ss4655635003	Apr 26, 2021 (155)
94	TOMMO_GENOMICS	ss5171180290	Apr 26, 2021 (155)
95	1000G_HIGH_COVERAGE	ss5263508179	Oct 17, 2022 (156)
96	EVA	ss5356782843	Oct 17, 2022 (156)
97	HUGCELL_USP	ss5461781249	Oct 17, 2022 (156)
98	EVA	ss5507976853	Oct 17, 2022 (156)
99	1000G_HIGH_COVERAGE	ss5546900643	Oct 17, 2022 (156)
100	SANFORD_IMAGENETICS	ss5637557113	Oct 17, 2022 (156)
101	TOMMO_GENOMICS	ss5707071530	Oct 17, 2022 (156)
102	YY_MCH	ss5806180204	Oct 17, 2022 (156)
103	EVA	ss5834766971	Oct 17, 2022 (156)
104	EVA	ss5854764604	Oct 17, 2022 (156)
105	EVA	ss5893695335	Oct 17, 2022 (156)
106	EVA	ss5965971986	Oct 17, 2022 (156)
107	1000Genomes	NC_000005.9 - 34859225	Oct 12, 2018 (152)
108	1000Genomes_30x	NC_000005.10 - 34859120	Oct 17, 2022 (156)
109	The Avon Longitudinal Study of Parents and Children	NC_000005.9 - 34859225	Oct 12, 2018 (152)
110	Genetic variation in the Estonian population	NC_000005.9 - 34859225	Oct 12, 2018 (152)
111	The Danish reference pan genome	NC_000005.9 - 34859225	Apr 26, 2020 (154)
112	gnomAD - Genomes	NC_000005.10 - 34859120	Apr 26, 2021 (155)
113	Genome of the Netherlands Release 5	NC_000005.9 - 34859225	Apr 26, 2020 (154)
114	HGDP-CEPH-db Supplement 1	NC_000005.8 - 34894982	Apr 26, 2020 (154)
115	HapMap	NC_000005.10 - 34859120	Apr 26, 2020 (154)
116	KOREAN population from KRGDB	NC_000005.9 - 34859225	Apr 26, 2020 (154)
117	Korean Genome Project	NC_000005.10 - 34859120	Apr 26, 2020 (154)
118	Northern Sweden	NC_000005.9 - 34859225	Jul 13, 2019 (153)
119	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000005.9 - 34859225	Apr 26, 2021 (155)
120	Qatari	NC_000005.9 - 34859225	Apr 26, 2020 (154)
121	SGDP_PRJ	NC_000005.9 - 34859225	Apr 26, 2020 (154)
122	Siberian	NC_000005.9 - 34859225	Apr 26, 2020 (154)
123	8.3KJPN	NC_000005.9 - 34859225	Apr 26, 2021 (155)
124	14KJPN	NC_000005.10 - 34859120	Oct 17, 2022 (156)
125	TopMed	NC_000005.10 - 34859120	Apr 26, 2021 (155)
126	UK 10K study - Twins	NC_000005.9 - 34859225	Oct 12, 2018 (152)
127	A Vietnamese Genetic Variation Database	NC_000005.9 - 34859225	Jul 13, 2019 (153)
128	ALFA	NC_000005.10 - 34859120	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs61498486	May 26, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
464985, ss81304384, ss108952946, ss116564287, ss162166651, ss200104804, ss207127837, ss278242505, ss285155237, ss293566532, ss825415585, ss1590959368, ss1712756353, ss3639276496, ss3639661257, ss3643493897, ss3847787093	NC_000005.8:34894981:G:A	NC_000005.10:34859119:G:A	(self)
26190320, 14565494, 10356487, 7254790, 6473200, 15246809, 5535520, 360521, 6742159, 13615105, 3619736, 29149597, 14565494, 3238155, ss221619176, ss232901086, ss240084216, ss536902789, ss558318561, ss652173714, ss832802218, ss981437155, ss1072535042, ss1314607208, ss1430305734, ss1581089851, ss1612636839, ss1655630872, ss1803347830, ss1924700229, ss1970061544, ss2022952748, ss2095154196, ss2151103382, ss2625976774, ss2706639549, ss2823159834, ss2996725650, ss3346331678, ss3629212604, ss3638547395, ss3652973847, ss3664618239, ss3732250655, ss3763283923, ss3785079845, ss3790491253, ss3795367685, ss3829188594, ss3838063603, ss3861598125, ss3908069415, ss3985134594, ss4017201293, ss5171180290, ss5356782843, ss5507976853, ss5637557113, ss5834766971, ss5965971986	NC_000005.9:34859224:G:A	NC_000005.10:34859119:G:A	(self)
34426578, 185030459, 2844005, 12793513, 40908634, 493012560, 3167426706, ss2272794407, ss3025261713, ss3648030952, ss3714452855, ss3806459845, ss3843502834, ss3956415512, ss4655635003, ss5263508179, ss5461781249, ss5546900643, ss5707071530, ss5806180204, ss5854764604, ss5893695335	NC_000005.10:34859119:G:A	NC_000005.10:34859119:G:A	(self)
ss14659515, ss14838843, ss22297964	NT_006576.14:17311330:G:A	NC_000005.10:34859119:G:A	(self)
ss301896, ss431153, ss627857, ss912565, ss1013325, ss1695599, ss1734280, ss6479481, ss44586656, ss66831037, ss67143160, ss67484491, ss70446852, ss70637545, ss71188404, ss75894743, ss83373036, ss98712899, ss105918999, ss121768834, ss143993715, ss153540951, ss155291921, ss159290102, ss170694041, ss172606208	NT_006576.16:34849224:G:A	NC_000005.10:34859119:G:A	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs163233

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs163233