Name: rs1654
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1654

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr22:17115498 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: G>A / G>C / G>T
Variation Type: SNV Single Nucleotide Variation
Frequency: G=0.157973 (41814/264690, TOPMED)
G=0.163192 (22875/140172, GnomAD)
G=0.19425 (5489/28258, 14KJPN) (+ 16 more)
G=0.19418 (3254/16758, 8.3KJPN)
G=0.1971 (1682/8534, ALFA)
G=0.1616 (1035/6404, 1000G_30x)
G=0.1631 (817/5008, 1000G)
G=0.1653 (740/4476, Estonian)
G=0.1725 (665/3854, ALSPAC)
G=0.1802 (668/3708, TWINSUK)
G=0.1614 (473/2930, KOREAN)
G=0.1488 (264/1774, HapMap)
G=0.176 (176/998, GoNL)
G=0.090 (54/600, NorthernSweden)
G=0.107 (58/544, SGDP_PRJ)
G=0.181 (39/216, Qatari)
G=0.167 (35/210, Vietnamese)
G=0.13 (7/52, Siberian)
G=0.25 (10/40, GENOME_DK)

Clinical Significance: Reported in ClinVar
Gene : Consequence: IL17RA : 3 Prime UTR Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	8534	G=0.1971	C=0.8029, T=0.0000
European	Sub	7582	G=0.1976	C=0.8024, T=0.0000
African	Sub	682	G=0.169	C=0.831, T=0.000
African Others	Sub	30	G=0.17	C=0.83, T=0.00
African American	Sub	652	G=0.169	C=0.831, T=0.000
Asian	Sub	10	G=0.6	C=0.4, T=0.0
East Asian	Sub	4	G=0.5	C=0.5, T=0.0
Other Asian	Sub	6	G=0.7	C=0.3, T=0.0
Latin American 1	Sub	4	G=1.0	C=0.0, T=0.0
Latin American 2	Sub	12	G=1.00	C=0.00, T=0.00
South Asian	Sub	8	G=0.6	C=0.4, T=0.0
Other	Sub	236	G=0.178	C=0.822, T=0.000

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	G=0.157973	C=0.842027
gnomAD - Genomes	Global	Study-wide	140172	G=0.163192	C=0.836808
gnomAD - Genomes	European	Sub	75906	G=0.17920	C=0.82080
gnomAD - Genomes	African	Sub	42012	G=0.13444	C=0.86556
gnomAD - Genomes	American	Sub	13650	G=0.15663	C=0.84337
gnomAD - Genomes	Ashkenazi Jewish	Sub	3324	G=0.1871	C=0.8129
gnomAD - Genomes	East Asian	Sub	3130	G=0.1565	C=0.8435
gnomAD - Genomes	Other	Sub	2150	G=0.1744	C=0.8256
14KJPN	JAPANESE	Study-wide	28258	G=0.19425	C=0.80575
8.3KJPN	JAPANESE	Study-wide	16758	G=0.19418	C=0.80582
Allele Frequency Aggregator	Total	Global	8534	G=0.1971	C=0.8029, T=0.0000
Allele Frequency Aggregator	European	Sub	7582	G=0.1976	C=0.8024, T=0.0000
Allele Frequency Aggregator	African	Sub	682	G=0.169	C=0.831, T=0.000
Allele Frequency Aggregator	Other	Sub	236	G=0.178	C=0.822, T=0.000
Allele Frequency Aggregator	Latin American 2	Sub	12	G=1.00	C=0.00, T=0.00
Allele Frequency Aggregator	Asian	Sub	10	G=0.6	C=0.4, T=0.0
Allele Frequency Aggregator	South Asian	Sub	8	G=0.6	C=0.4, T=0.0
Allele Frequency Aggregator	Latin American 1	Sub	4	G=1.0	C=0.0, T=0.0
1000Genomes_30x	Global	Study-wide	6404	G=0.1616	C=0.8384
1000Genomes_30x	African	Sub	1786	G=0.1349	C=0.8651
1000Genomes_30x	Europe	Sub	1266	G=0.2077	C=0.7923
1000Genomes_30x	South Asian	Sub	1202	G=0.1755	C=0.8245
1000Genomes_30x	East Asian	Sub	1170	G=0.1735	C=0.8265
1000Genomes_30x	American	Sub	980	G=0.119	C=0.881
1000Genomes	Global	Study-wide	5008	G=0.1631	C=0.8369
1000Genomes	African	Sub	1322	G=0.1346	C=0.8654
1000Genomes	East Asian	Sub	1008	G=0.1746	C=0.8254
1000Genomes	Europe	Sub	1006	G=0.2018	C=0.7982
1000Genomes	South Asian	Sub	978	G=0.180	C=0.820
1000Genomes	American	Sub	694	G=0.121	C=0.879
Genetic variation in the Estonian population	Estonian	Study-wide	4476	G=0.1653	C=0.8347
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.1725	C=0.8275
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.1802	C=0.8198
KOREAN population from KRGDB	KOREAN	Study-wide	2930	G=0.1614	A=0.0000, C=0.8386, T=0.0000
HapMap	Global	Study-wide	1774	G=0.1488	C=0.8512
HapMap	African	Sub	684	G=0.092	C=0.908
HapMap	American	Sub	660	G=0.173	C=0.827
HapMap	Asian	Sub	254	G=0.197	C=0.803
HapMap	Europe	Sub	176	G=0.210	C=0.790
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	G=0.176	C=0.824
Northern Sweden	ACPOP	Study-wide	600	G=0.090	C=0.910
SGDP_PRJ	Global	Study-wide	544	G=0.107	C=0.893
Qatari	Global	Study-wide	216	G=0.181	C=0.819
A Vietnamese Genetic Variation Database	Global	Study-wide	210	G=0.167	C=0.833
Siberian	Global	Study-wide	52	G=0.13	C=0.87
The Danish reference pan genome	Danish	Study-wide	40	G=0.25	C=0.75

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 22	NC_000022.11:g.17115498G>A
GRCh38.p14 chr 22	NC_000022.11:g.17115498G>C
GRCh38.p14 chr 22	NC_000022.11:g.17115498G>T
GRCh37.p13 chr 22	NC_000022.10:g.17596388G>A
GRCh37.p13 chr 22	NC_000022.10:g.17596388G>C
GRCh37.p13 chr 22	NC_000022.10:g.17596388G>T
IL17RA RefSeqGene (LRG_355)	NG_028257.1:g.35538G>A
IL17RA RefSeqGene (LRG_355)	NG_028257.1:g.35538G>C
IL17RA RefSeqGene (LRG_355)	NG_028257.1:g.35538G>T

Gene: IL17RA, interleukin 17 receptor A (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
IL17RA transcript variant 1	NM_014339.7:c.*5678=	N/A	3 Prime UTR Variant
IL17RA transcript variant 2	NM_001289905.2:c.*5678=	N/A	3 Prime UTR Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Allele: C (allele ID: 351104 )

ClinVar Accession	Disease Names	Clinical Significance
RCV000367325.3	Familial Candidiasis, Recessive	Benign

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	G=	A	C	T
GRCh38.p14 chr 22	NC_000022.11:g.17115498=	NC_000022.11:g.17115498G>A	NC_000022.11:g.17115498G>C	NC_000022.11:g.17115498G>T
GRCh37.p13 chr 22	NC_000022.10:g.17596388=	NC_000022.10:g.17596388G>A	NC_000022.10:g.17596388G>C	NC_000022.10:g.17596388G>T
IL17RA RefSeqGene (LRG_355)	NG_028257.1:g.35538=	NG_028257.1:g.35538G>A	NG_028257.1:g.35538G>C	NG_028257.1:g.35538G>T
IL17RA transcript variant 1	NM_014339.7:c.*5678=	NM_014339.7:c.*5678G>A	NM_014339.7:c.*5678G>C	NM_014339.7:c.*5678G>T
IL17RA transcript variant 1	NM_014339.6:c.*5678=	NM_014339.6:c.*5678G>A	NM_014339.6:c.*5678G>C	NM_014339.6:c.*5678G>T
IL17RA transcript variant 2	NM_001289905.2:c.*5678=	NM_001289905.2:c.*5678G>A	NM_001289905.2:c.*5678G>C	NM_001289905.2:c.*5678G>T
IL17RA transcript variant 2	NM_001289905.1:c.*5678=	NM_001289905.1:c.*5678G>A	NM_001289905.1:c.*5678G>C	NM_001289905.1:c.*5678G>T

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

96 SubSNP, 19 Frequency, 1 ClinVar submissions

No	Submitter	Submission ID	Date (Build)
1	WIAF	ss1679	Sep 19, 2000 (36)
2	TSC-CSHL	ss85194	Oct 04, 2000 (92)
3	LEE	ss1520361	Oct 04, 2000 (92)
4	CGAP-GAI	ss4322068	Jan 04, 2002 (102)
5	LEE	ss4393523	May 29, 2002 (106)
6	LEE	ss4412176	May 29, 2002 (106)
7	SC_SNP	ss7995158	Apr 21, 2003 (114)
8	BCM_SSAHASNP	ss11004080	Jul 11, 2003 (116)
9	WI_SSAHASNP	ss12527436	Jul 11, 2003 (116)
10	SC_SNP	ss13347875	Dec 05, 2003 (119)
11	CGAP-GAI	ss16242560	Feb 27, 2004 (120)
12	CSHL-HAPMAP	ss17721617	Feb 27, 2004 (120)
13	SSAHASNP	ss21839922	Apr 05, 2004 (121)
14	ABI	ss44309546	Mar 13, 2006 (126)
15	KRIBB_YJKIM	ss65824222	Nov 29, 2006 (127)
16	AFFY	ss66187447	Nov 29, 2006 (127)
17	PERLEGEN	ss69277670	May 16, 2007 (127)
18	AFFY	ss76259529	Dec 08, 2007 (130)
19	HGSV	ss81253369	Dec 15, 2007 (130)
20	KRIBB_YJKIM	ss81403907	Dec 15, 2007 (130)
21	HGSV	ss81715661	Dec 15, 2007 (130)
22	HGSV	ss82156819	Dec 15, 2007 (130)
23	HGSV	ss84622524	Dec 15, 2007 (130)
24	BCMHGSC_JDW	ss91870904	Mar 24, 2008 (129)
25	HUMANGENOME_JCVI	ss96091802	Feb 06, 2009 (130)
26	BGI	ss103838775	Dec 01, 2009 (131)
27	1000GENOMES	ss112538187	Jan 25, 2009 (130)
28	1000GENOMES	ss114009703	Jan 25, 2009 (130)
29	ILLUMINA-UK	ss117356094	Feb 14, 2009 (130)
30	ENSEMBL	ss138332387	Dec 01, 2009 (131)
31	ENSEMBL	ss142888262	Dec 01, 2009 (131)
32	GMI	ss157009693	Dec 01, 2009 (131)
33	COMPLETE_GENOMICS	ss167649756	Jul 04, 2010 (132)
34	COMPLETE_GENOMICS	ss168839836	Jul 04, 2010 (132)
35	COMPLETE_GENOMICS	ss171811560	Jul 04, 2010 (132)
36	AFFY	ss173011782	Jul 04, 2010 (132)
37	BUSHMAN	ss204044608	Jul 04, 2010 (132)
38	BCM-HGSC-SUB	ss208843108	Jul 04, 2010 (132)
39	1000GENOMES	ss228609251	Jul 14, 2010 (132)
40	1000GENOMES	ss238015619	Jul 15, 2010 (132)
41	1000GENOMES	ss244146311	Jul 15, 2010 (132)
42	BL	ss255833006	May 09, 2011 (134)
43	GMI	ss283579156	May 04, 2012 (137)
44	GMI	ss287547173	Apr 25, 2013 (138)
45	PJP	ss292732754	May 09, 2011 (134)
46	TISHKOFF	ss566548656	Apr 25, 2013 (138)
47	SSMP	ss662469698	Apr 25, 2013 (138)
48	EVA-GONL	ss995203453	Aug 21, 2014 (142)
49	JMKIDD_LAB	ss1082557389	Aug 21, 2014 (142)
50	1000GENOMES	ss1366612396	Aug 21, 2014 (142)
51	DDI	ss1429213370	Apr 01, 2015 (144)
52	EVA_GENOME_DK	ss1579696693	Apr 01, 2015 (144)
53	EVA_UK10K_ALSPAC	ss1639720288	Apr 01, 2015 (144)
54	EVA_UK10K_TWINSUK	ss1682714321	Apr 01, 2015 (144)
55	EVA_DECODE	ss1699272907	Apr 01, 2015 (144)
56	EVA_SVP	ss1713729796	Apr 01, 2015 (144)
57	HAMMER_LAB	ss1809725297	Sep 08, 2015 (146)
58	WEILL_CORNELL_DGM	ss1938762453	Feb 12, 2016 (147)
59	GENOMED	ss1969243247	Jul 19, 2016 (147)
60	JJLAB	ss2030154479	Sep 14, 2016 (149)
61	ILLUMINA	ss2095120805	Dec 20, 2016 (150)
62	USC_VALOUEV	ss2158762970	Dec 20, 2016 (150)
63	SYSTEMSBIOZJU	ss2629575333	Nov 08, 2017 (151)
64	GRF	ss2704503085	Nov 08, 2017 (151)
65	GNOMAD	ss2972768457	Nov 08, 2017 (151)
66	SWEGEN	ss3019048873	Nov 08, 2017 (151)
67	BIOINF_KMB_FNS_UNIBA	ss3028915450	Nov 08, 2017 (151)
68	CSHL	ss3352765593	Nov 08, 2017 (151)
69	URBANLAB	ss3651147117	Oct 12, 2018 (152)
70	ILLUMINA	ss3652630921	Oct 12, 2018 (152)
71	EGCUT_WGS	ss3685590893	Jul 13, 2019 (153)
72	EVA_DECODE	ss3707917123	Jul 13, 2019 (153)
73	ACPOP	ss3743805850	Jul 13, 2019 (153)
74	EVA	ss3759208192	Jul 13, 2019 (153)
75	PACBIO	ss3788787512	Jul 13, 2019 (153)
76	PACBIO	ss3793659250	Jul 13, 2019 (153)
77	PACBIO	ss3798545545	Jul 13, 2019 (153)
78	KHV_HUMAN_GENOMES	ss3822375047	Jul 13, 2019 (153)
79	EVA	ss3835917661	Apr 27, 2020 (154)
80	EVA	ss3841587638	Apr 27, 2020 (154)
81	EVA	ss3847102409	Apr 27, 2020 (154)
82	SGDP_PRJ	ss3890209454	Apr 27, 2020 (154)
83	KRGDB	ss3940585077	Apr 27, 2020 (154)
84	TOPMED	ss5104534536	Apr 27, 2021 (155)
85	TOMMO_GENOMICS	ss5231945753	Apr 27, 2021 (155)
86	1000G_HIGH_COVERAGE	ss5310592495	Oct 13, 2022 (156)
87	EVA	ss5440411028	Oct 13, 2022 (156)
88	HUGCELL_USP	ss5502514166	Oct 13, 2022 (156)
89	1000G_HIGH_COVERAGE	ss5617920646	Oct 13, 2022 (156)
90	SANFORD_IMAGENETICS	ss5664194288	Oct 13, 2022 (156)
91	TOMMO_GENOMICS	ss5792860258	Oct 13, 2022 (156)
92	YY_MCH	ss5818576744	Oct 13, 2022 (156)
93	EVA	ss5821873616	Oct 13, 2022 (156)
94	EVA	ss5853338658	Oct 13, 2022 (156)
95	EVA	ss5881281893	Oct 13, 2022 (156)
96	EVA	ss5959072431	Oct 13, 2022 (156)
97	1000Genomes	NC_000022.10 - 17596388	Oct 12, 2018 (152)
98	1000Genomes_30x	NC_000022.11 - 17115498	Oct 13, 2022 (156)
99	The Avon Longitudinal Study of Parents and Children	NC_000022.10 - 17596388	Oct 12, 2018 (152)
100	Genetic variation in the Estonian population	NC_000022.10 - 17596388	Oct 12, 2018 (152)
101	The Danish reference pan genome	NC_000022.10 - 17596388	Apr 27, 2020 (154)
102	gnomAD - Genomes	NC_000022.11 - 17115498	Apr 27, 2021 (155)
103	Genome of the Netherlands Release 5	NC_000022.10 - 17596388	Apr 27, 2020 (154)
104	HapMap	NC_000022.11 - 17115498	Apr 27, 2020 (154)
105	KOREAN population from KRGDB	NC_000022.10 - 17596388	Apr 27, 2020 (154)
106	Northern Sweden	NC_000022.10 - 17596388	Jul 13, 2019 (153)
107	Qatari	NC_000022.10 - 17596388	Apr 27, 2020 (154)
108	SGDP_PRJ	NC_000022.10 - 17596388	Apr 27, 2020 (154)
109	Siberian	NC_000022.10 - 17596388	Apr 27, 2020 (154)
110	8.3KJPN	NC_000022.10 - 17596388	Apr 27, 2021 (155)
111	14KJPN	NC_000022.11 - 17115498	Oct 13, 2022 (156)
112	TopMed	NC_000022.11 - 17115498	Apr 27, 2021 (155)
113	UK 10K study - Twins	NC_000022.10 - 17596388	Oct 12, 2018 (152)
114	A Vietnamese Genetic Variation Database	NC_000022.10 - 17596388	Jul 13, 2019 (153)
115	ALFA	NC_000022.11 - 17115498	Apr 27, 2021 (155)
116	ClinVar	RCV000367325.3	Oct 13, 2022 (156)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs712976	Jan 18, 2001 (92)
rs3171594	Jul 03, 2002 (106)
rs56633973	May 26, 2008 (130)
rs59522881	Feb 27, 2009 (130)
rs60555913	May 26, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
47762471, ss3940585077	NC_000022.10:17596387:G:A	NC_000022.11:17115497:G:A	(self)
ss81253369, ss81715661, ss82156819, ss84622524	NC_000022.8:15970941:G:C	NC_000022.11:17115497:G:C	(self)
ss66187447, ss76259529, ss91870904, ss112538187, ss114009703, ss117356094, ss167649756, ss168839836, ss171811560, ss173011782, ss204044608, ss208843108, ss255833006, ss283579156, ss287547173, ss292732754, ss1699272907, ss1713729796	NC_000022.9:15976387:G:C	NC_000022.11:17115497:G:C	(self)
80144087, 44344635, 31329141, 5861632, 19755919, 47762471, 17090715, 20804375, 42226434, 11279324, 89915060, 44344635, 9783948, ss228609251, ss238015619, ss244146311, ss566548656, ss662469698, ss995203453, ss1082557389, ss1366612396, ss1429213370, ss1579696693, ss1639720288, ss1682714321, ss1809725297, ss1938762453, ss1969243247, ss2030154479, ss2095120805, ss2158762970, ss2629575333, ss2704503085, ss2972768457, ss3019048873, ss3352765593, ss3652630921, ss3685590893, ss3743805850, ss3759208192, ss3788787512, ss3793659250, ss3798545545, ss3835917661, ss3841587638, ss3890209454, ss3940585077, ss5231945753, ss5440411028, ss5664194288, ss5821873616, ss5959072431	NC_000022.10:17596387:G:C	NC_000022.11:17115497:G:C	(self)
RCV000367325.3, 105446581, 566022608, 2224473, 126697362, 379643483, 2746221749, ss3028915450, ss3651147117, ss3707917123, ss3822375047, ss3847102409, ss5104534536, ss5310592495, ss5502514166, ss5617920646, ss5792860258, ss5818576744, ss5853338658, ss5881281893	NC_000022.11:17115497:G:C	NC_000022.11:17115497:G:C	(self)
ss1679, ss85194, ss1520361, ss4322068, ss4393523, ss4412176, ss7995158, ss11004080, ss12527436, ss13347875, ss16242560, ss17721617, ss21839922, ss44309546, ss65824222, ss69277670, ss81403907, ss96091802, ss103838775, ss138332387, ss142888262, ss157009693	NT_011519.10:748537:G:C	NC_000022.11:17115497:G:C	(self)
47762471, ss3940585077	NC_000022.10:17596387:G:T	NC_000022.11:17115497:G:T	(self)
2746221749	NC_000022.11:17115497:G:T	NC_000022.11:17115497:G:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs1654

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs1654