Name: rs1739855
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1739855

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr1:1298561 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: T>C
Variation Type: SNV Single Nucleotide Variation
Frequency: C=0.341097 (90285/264690, TOPMED)
C=0.249536 (61619/246934, GnomAD_exome)
C=0.122736 (21183/172590, ALFA) (+ 20 more)
C=0.346671 (42974/123962, GnomAD)
C=0.252709 (29986/118658, ExAC)
T=0.31749 (8933/28136, 14KJPN)
T=0.31933 (5322/16666, 8.3KJPN)
C=0.29019 (3769/12988, GO-ESP)
C=0.4988 (3194/6404, 1000G_30x)
C=0.4968 (2488/5008, 1000G)
C=0.0993 (445/4480, Estonian)
C=0.0755 (291/3854, ALSPAC)
C=0.0715 (265/3708, TWINSUK)
T=0.2807 (810/2886, KOREAN)
T=0.4397 (831/1890, HapMap)
T=0.2675 (482/1802, Korea1K)
C=0.105 (63/600, NorthernSweden)
C=0.096 (51/534, MGP)
T=0.249 (85/342, SGDP_PRJ)
C=0.145 (44/304, FINRISK)
C=0.282 (61/216, Qatari)
C=0.12 (5/40, GENOME_DK)
T=0.45 (10/22, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: ACAP3 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	188858	T=0.864210	C=0.135790
European	Sub	156296	T=0.926415	C=0.073585
African	Sub	14616	T=0.29002	C=0.70998
African Others	Sub	512	T=0.158	C=0.842
African American	Sub	14104	T=0.29481	C=0.70519
Asian	Sub	672	T=0.237	C=0.763
East Asian	Sub	512	T=0.254	C=0.746
Other Asian	Sub	160	T=0.181	C=0.819
Latin American 1	Sub	1018	T=0.6729	C=0.3271
Latin American 2	Sub	2206	T=0.6958	C=0.3042
South Asian	Sub	182	T=0.698	C=0.302
Other	Sub	13868	T=0.84172	C=0.15828

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	T=0.658903	C=0.341097
gnomAD - Exomes	Global	Study-wide	246934	T=0.750464	C=0.249536
gnomAD - Exomes	European	Sub	132314	T=0.911604	C=0.088396
gnomAD - Exomes	Asian	Sub	48670	T=0.49817	C=0.50183
gnomAD - Exomes	American	Sub	34042	T=0.65619	C=0.34381
gnomAD - Exomes	African	Sub	15984	T=0.25826	C=0.74174
gnomAD - Exomes	Ashkenazi Jewish	Sub	9882	T=0.9162	C=0.0838
gnomAD - Exomes	Other	Sub	6042	T=0.8161	C=0.1839
Allele Frequency Aggregator	Total	Global	172590	T=0.877264	C=0.122736
Allele Frequency Aggregator	European	Sub	146220	T=0.926002	C=0.073998
Allele Frequency Aggregator	Other	Sub	12450	T=0.84378	C=0.15622
Allele Frequency Aggregator	African	Sub	9842	T=0.3044	C=0.6956
Allele Frequency Aggregator	Latin American 2	Sub	2206	T=0.6958	C=0.3042
Allele Frequency Aggregator	Latin American 1	Sub	1018	T=0.6729	C=0.3271
Allele Frequency Aggregator	Asian	Sub	672	T=0.237	C=0.763
Allele Frequency Aggregator	South Asian	Sub	182	T=0.698	C=0.302
gnomAD - Genomes	Global	Study-wide	123962	T=0.653329	C=0.346671
gnomAD - Genomes	European	Sub	65200	T=0.90321	C=0.09679
gnomAD - Genomes	African	Sub	40236	T=0.26367	C=0.73633
gnomAD - Genomes	American	Sub	10486	T=0.64372	C=0.35628
gnomAD - Genomes	Ashkenazi Jewish	Sub	3102	T=0.8997	C=0.1003
gnomAD - Genomes	East Asian	Sub	3034	T=0.2261	C=0.7739
gnomAD - Genomes	Other	Sub	1904	T=0.6633	C=0.3367
ExAC	Global	Study-wide	118658	T=0.747291	C=0.252709
ExAC	Europe	Sub	71164	T=0.91307	C=0.08693
ExAC	Asian	Sub	24998	T=0.51548	C=0.48452
ExAC	American	Sub	11462	T=0.64535	C=0.35465
ExAC	African	Sub	10158	T=0.26797	C=0.73203
ExAC	Other	Sub	876	T=0.787	C=0.213
14KJPN	JAPANESE	Study-wide	28136	T=0.31749	C=0.68251
8.3KJPN	JAPANESE	Study-wide	16666	T=0.31933	C=0.68067
GO Exome Sequencing Project	Global	Study-wide	12988	T=0.70981	C=0.29019
GO Exome Sequencing Project	European American	Sub	8590	T=0.9260	C=0.0740
GO Exome Sequencing Project	African American	Sub	4398	T=0.2876	C=0.7124
1000Genomes_30x	Global	Study-wide	6404	T=0.5012	C=0.4988
1000Genomes_30x	African	Sub	1786	T=0.1747	C=0.8253
1000Genomes_30x	Europe	Sub	1266	T=0.9194	C=0.0806
1000Genomes_30x	South Asian	Sub	1202	T=0.6098	C=0.3902
1000Genomes_30x	East Asian	Sub	1170	T=0.2342	C=0.7658
1000Genomes_30x	American	Sub	980	T=0.742	C=0.258
1000Genomes	Global	Study-wide	5008	T=0.5032	C=0.4968
1000Genomes	African	Sub	1322	T=0.1831	C=0.8169
1000Genomes	East Asian	Sub	1008	T=0.2341	C=0.7659
1000Genomes	Europe	Sub	1006	T=0.9175	C=0.0825
1000Genomes	South Asian	Sub	978	T=0.620	C=0.380
1000Genomes	American	Sub	694	T=0.739	C=0.261
Genetic variation in the Estonian population	Estonian	Study-wide	4480	T=0.9007	C=0.0993
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	T=0.9245	C=0.0755
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	T=0.9285	C=0.0715
KOREAN population from KRGDB	KOREAN	Study-wide	2886	T=0.2807	C=0.7193
HapMap	Global	Study-wide	1890	T=0.4397	C=0.5603
HapMap	American	Sub	768	T=0.594	C=0.406
HapMap	African	Sub	692	T=0.212	C=0.788
HapMap	Asian	Sub	254	T=0.240	C=0.760
HapMap	Europe	Sub	176	T=0.949	C=0.051
Korean Genome Project	KOREAN	Study-wide	1802	T=0.2675	C=0.7325
Northern Sweden	ACPOP	Study-wide	600	T=0.895	C=0.105
Medical Genome Project healthy controls from Spanish population	Spanish controls	Study-wide	534	T=0.904	C=0.096
SGDP_PRJ	Global	Study-wide	342	T=0.249	C=0.751
FINRISK	Finnish from FINRISK project	Study-wide	304	T=0.855	C=0.145
Qatari	Global	Study-wide	216	T=0.718	C=0.282
The Danish reference pan genome	Danish	Study-wide	40	T=0.88	C=0.12
Siberian	Global	Study-wide	22	T=0.45	C=0.55

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 1	NC_000001.11:g.1298561T>C
GRCh37.p13 chr 1	NC_000001.10:g.1233941T>C

Gene: ACAP3, ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
ACAP3 transcript	NM_030649.3:c.863+6A>G	N/A	Intron Variant
ACAP3 transcript variant X6	XM_005244715.3:c.863+6A>G	N/A	Intron Variant
ACAP3 transcript variant X1	XM_011540606.3:c.893+6A>G	N/A	Intron Variant
ACAP3 transcript variant X2	XM_011540607.2:c.893+6A>G	N/A	Intron Variant
ACAP3 transcript variant X4	XM_011540608.3:c.797+6A>G	N/A	Intron Variant
ACAP3 transcript variant X5	XM_011540609.3:c.893+6A>G	N/A	Intron Variant
ACAP3 transcript variant X3	XM_024452993.2:c.863+6A>G	N/A	Intron Variant
ACAP3 transcript variant X7	XM_005244717.4:c.	N/A	Genic Upstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	T=	C
GRCh38.p14 chr 1	NC_000001.11:g.1298561=	NC_000001.11:g.1298561T>C
GRCh37.p13 chr 1	NC_000001.10:g.1233941=	NC_000001.10:g.1233941T>C
ACAP3 transcript	NM_030649.2:c.863+6=	NM_030649.2:c.863+6A>G
ACAP3 transcript	NM_030649.3:c.863+6=	NM_030649.3:c.863+6A>G
ACAP3 transcript variant X1	XM_005244714.1:c.767+6=	XM_005244714.1:c.767+6A>G
ACAP3 transcript variant X2	XM_005244715.1:c.863+6=	XM_005244715.1:c.863+6A>G
ACAP3 transcript variant X6	XM_005244715.3:c.863+6=	XM_005244715.3:c.863+6A>G
ACAP3 transcript variant X3	XM_005244716.1:c.737+6=	XM_005244716.1:c.737+6A>G
ACAP3 transcript variant X1	XM_011540606.3:c.893+6=	XM_011540606.3:c.893+6A>G
ACAP3 transcript variant X2	XM_011540607.2:c.893+6=	XM_011540607.2:c.893+6A>G
ACAP3 transcript variant X4	XM_011540608.3:c.797+6=	XM_011540608.3:c.797+6A>G
ACAP3 transcript variant X5	XM_011540609.3:c.893+6=	XM_011540609.3:c.893+6A>G
ACAP3 transcript variant X3	XM_024452993.2:c.863+6=	XM_024452993.2:c.863+6A>G

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

112 SubSNP, 23 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	SC_JCM	ss2582911	Nov 09, 2000 (89)
2	YUSUKE	ss3241595	Sep 28, 2001 (100)
3	ABI	ss44021608	Mar 13, 2006 (126)
4	ILLUMINA	ss74975174	Dec 07, 2007 (129)
5	BCMHGSC_JDW	ss87158945	Mar 23, 2008 (129)
6	BGI	ss105112307	Dec 01, 2009 (131)
7	ILLUMINA-UK	ss118440959	Feb 14, 2009 (130)
8	KRIBB_YJKIM	ss119402625	Dec 01, 2009 (131)
9	GMI	ss154529427	Dec 01, 2009 (131)
10	ILLUMINA	ss160442305	Dec 01, 2009 (131)
11	COMPLETE_GENOMICS	ss163709614	Jul 04, 2010 (132)
12	ILLUMINA	ss172823183	Jul 04, 2010 (132)
13	BUSHMAN	ss197891369	Jul 04, 2010 (132)
14	1000GENOMES	ss218192861	Jul 14, 2010 (132)
15	1000GENOMES	ss230397045	Jul 14, 2010 (132)
16	GMI	ss275682925	May 04, 2012 (137)
17	ILLUMINA	ss480236640	May 04, 2012 (137)
18	ILLUMINA	ss480247336	May 04, 2012 (137)
19	ILLUMINA	ss480985358	Sep 08, 2015 (146)
20	ILLUMINA	ss484916291	May 04, 2012 (137)
21	1000GENOMES	ss489714877	May 04, 2012 (137)
22	CLINSEQ_SNP	ss491581992	May 04, 2012 (137)
23	ILLUMINA	ss536967563	Sep 08, 2015 (146)
24	TISHKOFF	ss553715868	Apr 25, 2013 (138)
25	SSMP	ss647519722	Apr 25, 2013 (138)
26	NHLBI-ESP	ss712262219	Apr 25, 2013 (138)
27	ILLUMINA	ss778460768	Sep 08, 2015 (146)
28	ILLUMINA	ss782904455	Sep 08, 2015 (146)
29	ILLUMINA	ss783867758	Sep 08, 2015 (146)
30	ILLUMINA	ss832159292	Sep 08, 2015 (146)
31	ILLUMINA	ss833916470	Sep 08, 2015 (146)
32	EVA-GONL	ss974773813	Aug 21, 2014 (142)
33	JMKIDD_LAB	ss1067414551	Aug 21, 2014 (142)
34	JMKIDD_LAB	ss1067614650	Aug 21, 2014 (142)
35	1000GENOMES	ss1289357956	Aug 21, 2014 (142)
36	DDI	ss1425686170	Apr 01, 2015 (144)
37	EVA_GENOME_DK	ss1573852671	Apr 01, 2015 (144)
38	EVA_FINRISK	ss1584003699	Apr 01, 2015 (144)
39	EVA_DECODE	ss1584133749	Apr 01, 2015 (144)
40	EVA_UK10K_ALSPAC	ss1599385864	Apr 01, 2015 (144)
41	EVA_UK10K_TWINSUK	ss1642379897	Apr 01, 2015 (144)
42	EVA_EXAC	ss1685230018	Apr 01, 2015 (144)
43	EVA_MGP	ss1710883926	Apr 01, 2015 (144)
44	EVA_SVP	ss1712305631	Apr 01, 2015 (144)
45	ILLUMINA	ss1751867612	Sep 08, 2015 (146)
46	HAMMER_LAB	ss1793720865	Sep 08, 2015 (146)
47	WEILL_CORNELL_DGM	ss1917966335	Feb 12, 2016 (147)
48	GENOMED	ss1966667938	Jul 19, 2016 (147)
49	JJLAB	ss2019500819	Sep 14, 2016 (149)
50	ILLUMINA	ss2094782210	Dec 20, 2016 (150)
51	ILLUMINA	ss2094948876	Dec 20, 2016 (150)
52	USC_VALOUEV	ss2147487919	Dec 20, 2016 (150)
53	HUMAN_LONGEVITY	ss2159401522	Dec 20, 2016 (150)
54	SYSTEMSBIOZJU	ss2624266048	Nov 08, 2017 (151)
55	ILLUMINA	ss2632465953	Nov 08, 2017 (151)
56	GRF	ss2697378650	Nov 08, 2017 (151)
57	GNOMAD	ss2731006560	Nov 08, 2017 (151)
58	GNOMAD	ss2746176735	Nov 08, 2017 (151)
59	GNOMAD	ss2750693323	Nov 08, 2017 (151)
60	AFFY	ss2984841415	Nov 08, 2017 (151)
61	AFFY	ss2985495030	Nov 08, 2017 (151)
62	SWEGEN	ss2986157481	Nov 08, 2017 (151)
63	BIOINF_KMB_FNS_UNIBA	ss3023514651	Nov 08, 2017 (151)
64	CSHL	ss3343275470	Nov 08, 2017 (151)
65	ILLUMINA	ss3626007477	Oct 11, 2018 (152)
66	ILLUMINA	ss3630505927	Oct 11, 2018 (152)
67	ILLUMINA	ss3633571533	Oct 11, 2018 (152)
68	ILLUMINA	ss3634302252	Oct 11, 2018 (152)
69	ILLUMINA	ss3635265735	Oct 11, 2018 (152)
70	ILLUMINA	ss3635978817	Oct 11, 2018 (152)
71	ILLUMINA	ss3637016076	Oct 11, 2018 (152)
72	ILLUMINA	ss3637732614	Oct 11, 2018 (152)
73	ILLUMINA	ss3640009618	Oct 11, 2018 (152)
74	ILLUMINA	ss3642746887	Oct 11, 2018 (152)
75	OMUKHERJEE_ADBS	ss3646219132	Oct 11, 2018 (152)
76	ILLUMINA	ss3651366277	Oct 11, 2018 (152)
77	ILLUMINA	ss3653615192	Oct 11, 2018 (152)
78	EGCUT_WGS	ss3654268611	Jul 12, 2019 (153)
79	EVA_DECODE	ss3686002012	Jul 12, 2019 (153)
80	ACPOP	ss3726720382	Jul 12, 2019 (153)
81	ILLUMINA	ss3744603183	Jul 12, 2019 (153)
82	EVA	ss3745726533	Jul 12, 2019 (153)
83	ILLUMINA	ss3772104935	Jul 12, 2019 (153)
84	KHV_HUMAN_GENOMES	ss3798749282	Jul 12, 2019 (153)
85	EVA	ss3823544000	Apr 25, 2020 (154)
86	EVA	ss3825549594	Apr 25, 2020 (154)
87	EVA	ss3825983541	Apr 25, 2020 (154)
88	SGDP_PRJ	ss3848009555	Apr 25, 2020 (154)
89	KRGDB	ss3892852765	Apr 25, 2020 (154)
90	KOGIC	ss3943640607	Apr 25, 2020 (154)
91	FSA-LAB	ss3983910988	Apr 25, 2021 (155)
92	FSA-LAB	ss3983910989	Apr 25, 2021 (155)
93	EVA	ss3986091735	Apr 25, 2021 (155)
94	EVA	ss4016889204	Apr 25, 2021 (155)
95	TOPMED	ss4436577855	Apr 25, 2021 (155)
96	TOMMO_GENOMICS	ss5142076484	Apr 25, 2021 (155)
97	1000G_HIGH_COVERAGE	ss5240880558	Oct 12, 2022 (156)
98	EVA	ss5314586151	Oct 12, 2022 (156)
99	EVA	ss5316211776	Oct 12, 2022 (156)
100	HUGCELL_USP	ss5442126157	Oct 12, 2022 (156)
101	1000G_HIGH_COVERAGE	ss5512511869	Oct 12, 2022 (156)
102	EVA	ss5623985722	Oct 12, 2022 (156)
103	SANFORD_IMAGENETICS	ss5624759209	Oct 12, 2022 (156)
104	TOMMO_GENOMICS	ss5666224608	Oct 12, 2022 (156)
105	EVA	ss5799472608	Oct 12, 2022 (156)
106	YY_MCH	ss5800248032	Oct 12, 2022 (156)
107	EVA	ss5831426019	Oct 12, 2022 (156)
108	EVA	ss5848243819	Oct 12, 2022 (156)
109	EVA	ss5848750441	Oct 12, 2022 (156)
110	EVA	ss5906722304	Oct 12, 2022 (156)
111	EVA	ss5936507420	Oct 12, 2022 (156)
112	EVA	ss5936591166	Oct 12, 2022 (156)
113	1000Genomes	NC_000001.10 - 1233941	Oct 11, 2018 (152)
114	1000Genomes_30x	NC_000001.11 - 1298561	Oct 12, 2022 (156)
115	The Avon Longitudinal Study of Parents and Children	NC_000001.10 - 1233941	Oct 11, 2018 (152)
116	Genetic variation in the Estonian population	NC_000001.10 - 1233941	Oct 11, 2018 (152)
117	ExAC	NC_000001.10 - 1233941	Oct 11, 2018 (152)
118	FINRISK	NC_000001.10 - 1233941	Apr 25, 2020 (154)
119	The Danish reference pan genome	NC_000001.10 - 1233941	Apr 25, 2020 (154)
120	gnomAD - Genomes	NC_000001.11 - 1298561	Apr 25, 2021 (155)
121	gnomAD - Exomes	NC_000001.10 - 1233941	Jul 12, 2019 (153)
122	GO Exome Sequencing Project	NC_000001.10 - 1233941	Oct 11, 2018 (152)
123	HapMap	NC_000001.11 - 1298561	Apr 25, 2020 (154)
124	KOREAN population from KRGDB	NC_000001.10 - 1233941	Apr 25, 2020 (154)
125	Korean Genome Project	NC_000001.11 - 1298561	Apr 25, 2020 (154)
126	Medical Genome Project healthy controls from Spanish population	NC_000001.10 - 1233941	Apr 25, 2020 (154)
127	Northern Sweden	NC_000001.10 - 1233941	Jul 12, 2019 (153)
128	Qatari	NC_000001.10 - 1233941	Apr 25, 2020 (154)
129	SGDP_PRJ	NC_000001.10 - 1233941	Apr 25, 2020 (154)
130	Siberian	NC_000001.10 - 1233941	Apr 25, 2020 (154)
131	8.3KJPN	NC_000001.10 - 1233941	Apr 25, 2021 (155)
132	14KJPN	NC_000001.11 - 1298561	Oct 12, 2022 (156)
133	TopMed	NC_000001.11 - 1298561	Apr 25, 2021 (155)
134	UK 10K study - Twins	NC_000001.10 - 1233941	Oct 11, 2018 (152)
135	ALFA	NC_000001.11 - 1298561	Apr 25, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs386543582	Aug 21, 2014 (142)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss87158945, ss118440959, ss163709614, ss197891369, ss275682925, ss480236640, ss491581992, ss1584133749, ss1712305631, ss3642746887	NC_000001.9:1223803:T:C	NC_000001.11:1298560:T:C	(self)
23277, 8476, 6859, 4404017, 160, 1359905, 21386, 2737, 30159, 678, 5247, 8265, 26535, 4273, 45791, 8476, ss218192861, ss230397045, ss480247336, ss480985358, ss484916291, ss489714877, ss536967563, ss553715868, ss647519722, ss712262219, ss778460768, ss782904455, ss783867758, ss832159292, ss833916470, ss974773813, ss1067414551, ss1067614650, ss1289357956, ss1425686170, ss1573852671, ss1584003699, ss1599385864, ss1642379897, ss1685230018, ss1710883926, ss1751867612, ss1793720865, ss1917966335, ss1966667938, ss2019500819, ss2094782210, ss2094948876, ss2147487919, ss2624266048, ss2632465953, ss2697378650, ss2731006560, ss2746176735, ss2750693323, ss2984841415, ss2985495030, ss2986157481, ss3343275470, ss3626007477, ss3630505927, ss3633571533, ss3634302252, ss3635265735, ss3635978817, ss3637016076, ss3637732614, ss3640009618, ss3646219132, ss3651366277, ss3653615192, ss3654268611, ss3726720382, ss3744603183, ss3745726533, ss3772104935, ss3823544000, ss3825549594, ss3825983541, ss3848009555, ss3892852765, ss3983910988, ss3983910989, ss3986091735, ss4016889204, ss5142076484, ss5314586151, ss5316211776, ss5623985722, ss5624759209, ss5799472608, ss5831426019, ss5848243819, ss5936507420, ss5936591166	NC_000001.10:1233940:T:C	NC_000001.11:1298560:T:C	(self)
37804, 192427, 385, 18608, 61712, 184190, 10209339633, ss2159401522, ss3023514651, ss3686002012, ss3798749282, ss3943640607, ss4436577855, ss5240880558, ss5442126157, ss5512511869, ss5666224608, ss5800248032, ss5848750441, ss5906722304	NC_000001.11:1298560:T:C	NC_000001.11:1298560:T:C	(self)
ss2582911, ss3241595, ss44021608, ss74975174, ss105112307, ss119402625, ss154529427, ss160442305, ss172823183	NT_004350.19:712572:T:C	NC_000001.11:1298560:T:C	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs1739855

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

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Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs1739855