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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs17423910

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr1:66223426 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
A>G
Variation Type
SNV Single Nucleotide Variation
Frequency
G=0.158540 (41964/264690, TOPMED)
G=0.196290 (42030/214122, ALFA)
G=0.158000 (22119/139994, GnomAD) (+ 20 more)
G=0.07768 (2195/28258, 14KJPN)
G=0.08007 (1342/16760, 8.3KJPN)
G=0.1483 (950/6404, 1000G_30x)
G=0.1480 (741/5008, 1000G)
G=0.1239 (555/4480, Estonian)
G=0.2055 (792/3854, ALSPAC)
G=0.2230 (827/3708, TWINSUK)
G=0.1006 (294/2922, KOREAN)
G=0.1536 (320/2084, HGDP_Stanford)
G=0.1379 (261/1892, HapMap)
G=0.2007 (228/1136, Daghestan)
G=0.213 (213/998, GoNL)
G=0.113 (71/626, Chileans)
G=0.187 (112/600, NorthernSweden)
G=0.236 (51/216, Qatari)
G=0.136 (29/214, Vietnamese)
A=0.434 (53/122, SGDP_PRJ)
G=0.22 (20/92, Ancient Sardinia)
G=0.10 (4/40, GENOME_DK)
A=0.4 (3/8, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
PDE4B : Intron Variant
Publications
1 citation
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 214212 A=0.803666 G=0.196334
European Sub 184408 A=0.795746 G=0.204254
African Sub 10408 A=0.90450 G=0.09550
African Others Sub 360 A=0.933 G=0.067
African American Sub 10048 A=0.90346 G=0.09654
Asian Sub 752 A=0.878 G=0.122
East Asian Sub 574 A=0.890 G=0.110
Other Asian Sub 178 A=0.837 G=0.163
Latin American 1 Sub 928 A=0.831 G=0.169
Latin American 2 Sub 5000 A=0.8644 G=0.1356
South Asian Sub 5054 A=0.7901 G=0.2099
Other Sub 7662 A=0.8161 G=0.1839


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 A=0.841460 G=0.158540
Allele Frequency Aggregator Total Global 214122 A=0.803710 G=0.196290
Allele Frequency Aggregator European Sub 184334 A=0.795789 G=0.204211
Allele Frequency Aggregator African Sub 10408 A=0.90450 G=0.09550
Allele Frequency Aggregator Other Sub 7646 A=0.8162 G=0.1838
Allele Frequency Aggregator South Asian Sub 5054 A=0.7901 G=0.2099
Allele Frequency Aggregator Latin American 2 Sub 5000 A=0.8644 G=0.1356
Allele Frequency Aggregator Latin American 1 Sub 928 A=0.831 G=0.169
Allele Frequency Aggregator Asian Sub 752 A=0.878 G=0.122
gnomAD - Genomes Global Study-wide 139994 A=0.842000 G=0.158000
gnomAD - Genomes European Sub 75832 A=0.81252 G=0.18748
gnomAD - Genomes African Sub 41932 A=0.90186 G=0.09814
gnomAD - Genomes American Sub 13634 A=0.84803 G=0.15197
gnomAD - Genomes Ashkenazi Jewish Sub 3318 A=0.7146 G=0.2854
gnomAD - Genomes East Asian Sub 3124 A=0.8688 G=0.1312
gnomAD - Genomes Other Sub 2154 A=0.8338 G=0.1662
14KJPN JAPANESE Study-wide 28258 A=0.92232 G=0.07768
8.3KJPN JAPANESE Study-wide 16760 A=0.91993 G=0.08007
1000Genomes_30x Global Study-wide 6404 A=0.8517 G=0.1483
1000Genomes_30x African Sub 1786 A=0.9026 G=0.0974
1000Genomes_30x Europe Sub 1266 A=0.7844 G=0.2156
1000Genomes_30x South Asian Sub 1202 A=0.8453 G=0.1547
1000Genomes_30x East Asian Sub 1170 A=0.8538 G=0.1462
1000Genomes_30x American Sub 980 A=0.851 G=0.149
1000Genomes Global Study-wide 5008 A=0.8520 G=0.1480
1000Genomes African Sub 1322 A=0.9062 G=0.0938
1000Genomes East Asian Sub 1008 A=0.8591 G=0.1409
1000Genomes Europe Sub 1006 A=0.7833 G=0.2167
1000Genomes South Asian Sub 978 A=0.842 G=0.158
1000Genomes American Sub 694 A=0.853 G=0.147
Genetic variation in the Estonian population Estonian Study-wide 4480 A=0.8761 G=0.1239
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 A=0.7945 G=0.2055
UK 10K study - Twins TWIN COHORT Study-wide 3708 A=0.7770 G=0.2230
KOREAN population from KRGDB KOREAN Study-wide 2922 A=0.8994 G=0.1006
HGDP-CEPH-db Supplement 1 Global Study-wide 2084 A=0.8464 G=0.1536
HGDP-CEPH-db Supplement 1 Est_Asia Sub 470 A=0.900 G=0.100
HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 A=0.751 G=0.249
HGDP-CEPH-db Supplement 1 Middle_Est Sub 350 A=0.811 G=0.189
HGDP-CEPH-db Supplement 1 Europe Sub 320 A=0.797 G=0.203
HGDP-CEPH-db Supplement 1 Africa Sub 242 A=0.905 G=0.095
HGDP-CEPH-db Supplement 1 America Sub 216 A=0.931 G=0.069
HGDP-CEPH-db Supplement 1 Oceania Sub 72 A=0.99 G=0.01
HapMap Global Study-wide 1892 A=0.8621 G=0.1379
HapMap American Sub 770 A=0.821 G=0.179
HapMap African Sub 692 A=0.918 G=0.082
HapMap Asian Sub 254 A=0.913 G=0.087
HapMap Europe Sub 176 A=0.750 G=0.250
Genome-wide autozygosity in Daghestan Global Study-wide 1136 A=0.7993 G=0.2007
Genome-wide autozygosity in Daghestan Daghestan Sub 628 A=0.807 G=0.193
Genome-wide autozygosity in Daghestan Near_East Sub 144 A=0.715 G=0.285
Genome-wide autozygosity in Daghestan Central Asia Sub 122 A=0.852 G=0.148
Genome-wide autozygosity in Daghestan Europe Sub 108 A=0.796 G=0.204
Genome-wide autozygosity in Daghestan South Asian Sub 98 A=0.87 G=0.13
Genome-wide autozygosity in Daghestan Caucasus Sub 36 A=0.64 G=0.36
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 A=0.787 G=0.213
Chileans Chilean Study-wide 626 A=0.887 G=0.113
Northern Sweden ACPOP Study-wide 600 A=0.813 G=0.187
Qatari Global Study-wide 216 A=0.764 G=0.236
A Vietnamese Genetic Variation Database Global Study-wide 214 A=0.864 G=0.136
SGDP_PRJ Global Study-wide 122 A=0.434 G=0.566
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 92 A=0.78 G=0.22
The Danish reference pan genome Danish Study-wide 40 A=0.90 G=0.10
Siberian Global Study-wide 8 A=0.4 G=0.6
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 1 NC_000001.11:g.66223426A>G
GRCh37.p13 chr 1 NC_000001.10:g.66689109A>G
PDE4B RefSeqGene NG_029038.1:g.435917A>G
Gene: PDE4B, phosphodiesterase 4B (plus strand)
Molecule type Change Amino acid[Codon] SO Term
PDE4B transcript variant c NM_001037340.3:c.237-2403…

NM_001037340.3:c.237-24034A>G

N/A Intron Variant
PDE4B transcript variant d NM_001037341.2:c.282-2403…

NM_001037341.2:c.282-24034A>G

N/A Intron Variant
PDE4B transcript variant e NM_001297440.2:c.6-24034A…

NM_001297440.2:c.6-24034A>G

N/A Intron Variant
PDE4B transcript variant f NM_001297441.1:c.57-24034…

NM_001297441.1:c.57-24034A>G

N/A Intron Variant
PDE4B transcript variant a NM_002600.4:c.282-24034A>G N/A Intron Variant
PDE4B transcript variant b NM_001037339.2:c. N/A Genic Upstream Transcript Variant
PDE4B transcript variant g NM_001297442.2:c. N/A Genic Upstream Transcript Variant
PDE4B transcript variant X3 XM_005270924.4:c. N/A Genic Upstream Transcript Variant
PDE4B transcript variant X5 XM_005270925.3:c. N/A Genic Upstream Transcript Variant
PDE4B transcript variant X2 XM_006710680.4:c. N/A Genic Upstream Transcript Variant
PDE4B transcript variant X1 XM_017001445.2:c. N/A Genic Upstream Transcript Variant
PDE4B transcript variant X4 XM_047422401.1:c. N/A Genic Upstream Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement A= G
GRCh38.p14 chr 1 NC_000001.11:g.66223426= NC_000001.11:g.66223426A>G
GRCh37.p13 chr 1 NC_000001.10:g.66689109= NC_000001.10:g.66689109A>G
PDE4B RefSeqGene NG_029038.1:g.435917= NG_029038.1:g.435917A>G
PDE4B transcript variant c NM_001037340.1:c.237-24034= NM_001037340.1:c.237-24034A>G
PDE4B transcript variant c NM_001037340.3:c.237-24034= NM_001037340.3:c.237-24034A>G
PDE4B transcript variant d NM_001037341.1:c.282-24034= NM_001037341.1:c.282-24034A>G
PDE4B transcript variant d NM_001037341.2:c.282-24034= NM_001037341.2:c.282-24034A>G
PDE4B transcript variant e NM_001297440.2:c.6-24034= NM_001297440.2:c.6-24034A>G
PDE4B transcript variant f NM_001297441.1:c.57-24034= NM_001297441.1:c.57-24034A>G
PDE4B transcript variant a NM_002600.3:c.282-24034= NM_002600.3:c.282-24034A>G
PDE4B transcript variant a NM_002600.4:c.282-24034= NM_002600.4:c.282-24034A>G
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

123 SubSNP, 23 Frequency submissions
No Submitter Submission ID Date (Build)
1 PERLEGEN ss24247677 Sep 20, 2004 (123)
2 ABI ss28532810 Dec 02, 2004 (126)
3 AFFY ss66476560 Dec 02, 2006 (127)
4 ILLUMINA ss66832675 Dec 02, 2006 (127)
5 ILLUMINA ss67185975 Dec 02, 2006 (127)
6 ILLUMINA ss67560440 Dec 02, 2006 (127)
7 ILLUMINA ss70664047 May 26, 2008 (130)
8 ILLUMINA ss71225604 May 18, 2007 (127)
9 ILLUMINA ss75894948 Dec 05, 2007 (129)
10 AFFY ss76288524 Dec 05, 2007 (129)
11 ILLUMINA ss79090995 Dec 15, 2007 (130)
12 KRIBB_YJKIM ss85385744 Dec 15, 2007 (130)
13 HUMANGENOME_JCVI ss99214390 Feb 06, 2009 (130)
14 BGI ss102748647 Dec 01, 2009 (131)
15 1000GENOMES ss110570401 Jan 25, 2009 (130)
16 ILLUMINA ss121797114 Dec 01, 2009 (131)
17 ILLUMINA ss153677078 Dec 01, 2009 (131)
18 GMI ss155112218 Dec 01, 2009 (131)
19 ILLUMINA ss159318121 Dec 01, 2009 (131)
20 ILLUMINA ss160443106 Dec 01, 2009 (131)
21 COMPLETE_GENOMICS ss163468459 Jul 04, 2010 (132)
22 COMPLETE_GENOMICS ss164455356 Jul 04, 2010 (132)
23 ILLUMINA ss170782342 Jul 04, 2010 (132)
24 ILLUMINA ss172827289 Jul 04, 2010 (132)
25 AFFY ss173137248 Jul 04, 2010 (132)
26 BUSHMAN ss198560071 Jul 04, 2010 (132)
27 1000GENOMES ss218428225 Jul 14, 2010 (132)
28 1000GENOMES ss230566330 Jul 14, 2010 (132)
29 1000GENOMES ss238254822 Jul 15, 2010 (132)
30 BL ss253150920 May 09, 2011 (134)
31 GMI ss275857589 May 04, 2012 (137)
32 ILLUMINA ss480239110 May 04, 2012 (137)
33 ILLUMINA ss480249818 May 04, 2012 (137)
34 ILLUMINA ss480988529 Sep 08, 2015 (146)
35 ILLUMINA ss484917524 May 04, 2012 (137)
36 ILLUMINA ss536968523 Sep 08, 2015 (146)
37 TISHKOFF ss554202008 Apr 25, 2013 (138)
38 SSMP ss648072126 Apr 25, 2013 (138)
39 ILLUMINA ss778834979 Sep 08, 2015 (146)
40 ILLUMINA ss782905072 Sep 08, 2015 (146)
41 ILLUMINA ss783868370 Sep 08, 2015 (146)
42 ILLUMINA ss825421513 Jul 19, 2016 (147)
43 ILLUMINA ss832159918 Sep 08, 2015 (146)
44 ILLUMINA ss832830159 Jul 12, 2019 (153)
45 ILLUMINA ss834295470 Sep 08, 2015 (146)
46 EVA-GONL ss975242154 Aug 21, 2014 (142)
47 JMKIDD_LAB ss1067949981 Aug 21, 2014 (142)
48 1000GENOMES ss1291203456 Aug 21, 2014 (142)
49 HAMMER_LAB ss1397248268 Sep 08, 2015 (146)
50 DDI ss1425835608 Apr 01, 2015 (144)
51 EVA_GENOME_DK ss1574117005 Apr 01, 2015 (144)
52 EVA_DECODE ss1584611433 Apr 01, 2015 (144)
53 EVA_UK10K_ALSPAC ss1600339457 Apr 01, 2015 (144)
54 EVA_UK10K_TWINSUK ss1643333490 Apr 01, 2015 (144)
55 EVA_SVP ss1712339773 Apr 01, 2015 (144)
56 ILLUMINA ss1751929912 Sep 08, 2015 (146)
57 HAMMER_LAB ss1794489838 Sep 08, 2015 (146)
58 WEILL_CORNELL_DGM ss1918450203 Feb 12, 2016 (147)
59 GENOMED ss1966765238 Jul 19, 2016 (147)
60 JJLAB ss2019742311 Sep 14, 2016 (149)
61 USC_VALOUEV ss2147758126 Dec 20, 2016 (150)
62 HUMAN_LONGEVITY ss2163152634 Dec 20, 2016 (150)
63 ILLUMINA ss2632526245 Nov 08, 2017 (151)
64 ILLUMINA ss2634999255 Nov 08, 2017 (151)
65 GRF ss2697675340 Nov 08, 2017 (151)
66 GNOMAD ss2756026164 Nov 08, 2017 (151)
67 AFFY ss2984861977 Nov 08, 2017 (151)
68 AFFY ss2985515188 Nov 08, 2017 (151)
69 SWEGEN ss2986941680 Nov 08, 2017 (151)
70 BIOINF_KMB_FNS_UNIBA ss3023632714 Nov 08, 2017 (151)
71 CSHL ss3343490590 Nov 08, 2017 (151)
72 ILLUMINA ss3626116295 Oct 11, 2018 (152)
73 ILLUMINA ss3630561864 Oct 11, 2018 (152)
74 ILLUMINA ss3632894713 Oct 11, 2018 (152)
75 ILLUMINA ss3633589418 Oct 11, 2018 (152)
76 ILLUMINA ss3634328684 Oct 11, 2018 (152)
77 ILLUMINA ss3635283217 Oct 11, 2018 (152)
78 ILLUMINA ss3636005092 Oct 11, 2018 (152)
79 ILLUMINA ss3637033643 Oct 11, 2018 (152)
80 ILLUMINA ss3637761760 Oct 11, 2018 (152)
81 ILLUMINA ss3638899805 Oct 11, 2018 (152)
82 ILLUMINA ss3639447520 Oct 11, 2018 (152)
83 ILLUMINA ss3640036045 Oct 11, 2018 (152)
84 ILLUMINA ss3640982288 Oct 11, 2018 (152)
85 ILLUMINA ss3641276252 Oct 11, 2018 (152)
86 ILLUMINA ss3642773432 Oct 11, 2018 (152)
87 URBANLAB ss3646680202 Oct 11, 2018 (152)
88 ILLUMINA ss3653634742 Oct 11, 2018 (152)
89 EGCUT_WGS ss3655011457 Jul 12, 2019 (153)
90 EVA_DECODE ss3686925186 Jul 12, 2019 (153)
91 ACPOP ss3727115347 Jul 12, 2019 (153)
92 ILLUMINA ss3744629650 Jul 12, 2019 (153)
93 EVA ss3746300899 Jul 12, 2019 (153)
94 ILLUMINA ss3772130985 Jul 12, 2019 (153)
95 PACBIO ss3783431660 Jul 12, 2019 (153)
96 PACBIO ss3789086444 Jul 12, 2019 (153)
97 PACBIO ss3793959222 Jul 12, 2019 (153)
98 KHV_HUMAN_GENOMES ss3799307784 Jul 12, 2019 (153)
99 EVA ss3826212346 Apr 25, 2020 (154)
100 EVA ss3836493525 Apr 25, 2020 (154)
101 EVA ss3841900041 Apr 25, 2020 (154)
102 HGDP ss3847336309 Apr 25, 2020 (154)
103 SGDP_PRJ ss3849010293 Apr 25, 2020 (154)
104 KRGDB ss3894036956 Apr 25, 2020 (154)
105 EVA ss3984801828 Apr 25, 2021 (155)
106 EVA ss4016915023 Apr 25, 2021 (155)
107 TOPMED ss4452478121 Apr 25, 2021 (155)
108 TOMMO_GENOMICS ss5144298905 Apr 25, 2021 (155)
109 1000G_HIGH_COVERAGE ss5242539622 Oct 12, 2022 (156)
110 EVA ss5314621938 Oct 12, 2022 (156)
111 EVA ss5319224435 Oct 12, 2022 (156)
112 HUGCELL_USP ss5443575373 Oct 12, 2022 (156)
113 EVA ss5505877861 Oct 12, 2022 (156)
114 1000G_HIGH_COVERAGE ss5514951642 Oct 12, 2022 (156)
115 SANFORD_IMAGENETICS ss5624207585 Oct 12, 2022 (156)
116 SANFORD_IMAGENETICS ss5625684120 Oct 12, 2022 (156)
117 TOMMO_GENOMICS ss5669170802 Oct 12, 2022 (156)
118 EVA ss5799486627 Oct 12, 2022 (156)
119 YY_MCH ss5800664324 Oct 12, 2022 (156)
120 EVA ss5832064404 Oct 12, 2022 (156)
121 EVA ss5848939611 Oct 12, 2022 (156)
122 EVA ss5908572335 Oct 12, 2022 (156)
123 EVA ss5937522042 Oct 12, 2022 (156)
124 1000Genomes NC_000001.10 - 66689109 Oct 11, 2018 (152)
125 1000Genomes_30x NC_000001.11 - 66223426 Oct 12, 2022 (156)
126 The Avon Longitudinal Study of Parents and Children NC_000001.10 - 66689109 Oct 11, 2018 (152)
127 Chileans NC_000001.10 - 66689109 Apr 25, 2020 (154)
128 Genome-wide autozygosity in Daghestan NC_000001.9 - 66461697 Apr 25, 2020 (154)
129 Genetic variation in the Estonian population NC_000001.10 - 66689109 Oct 11, 2018 (152)
130 The Danish reference pan genome NC_000001.10 - 66689109 Apr 25, 2020 (154)
131 gnomAD - Genomes NC_000001.11 - 66223426 Apr 25, 2021 (155)
132 Genome of the Netherlands Release 5 NC_000001.10 - 66689109 Apr 25, 2020 (154)
133 HGDP-CEPH-db Supplement 1 NC_000001.9 - 66461697 Apr 25, 2020 (154)
134 HapMap NC_000001.11 - 66223426 Apr 25, 2020 (154)
135 KOREAN population from KRGDB NC_000001.10 - 66689109 Apr 25, 2020 (154)
136 Northern Sweden NC_000001.10 - 66689109 Jul 12, 2019 (153)
137 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000001.10 - 66689109 Apr 25, 2021 (155)
138 Qatari NC_000001.10 - 66689109 Apr 25, 2020 (154)
139 SGDP_PRJ NC_000001.10 - 66689109 Apr 25, 2020 (154)
140 Siberian NC_000001.10 - 66689109 Apr 25, 2020 (154)
141 8.3KJPN NC_000001.10 - 66689109 Apr 25, 2021 (155)
142 14KJPN NC_000001.11 - 66223426 Oct 12, 2022 (156)
143 TopMed NC_000001.11 - 66223426 Apr 25, 2021 (155)
144 UK 10K study - Twins NC_000001.10 - 66689109 Oct 11, 2018 (152)
145 A Vietnamese Genetic Variation Database NC_000001.10 - 66689109 Jul 12, 2019 (153)
146 ALFA NC_000001.11 - 66223426 Apr 25, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs17878295 Mar 10, 2006 (126)
rs60494102 May 26, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss3638899805, ss3639447520 NC_000001.8:66401129:A:G NC_000001.11:66223425:A:G (self)
9657, 14201, ss110570401, ss163468459, ss164455356, ss198560071, ss253150920, ss275857589, ss480239110, ss825421513, ss1397248268, ss1584611433, ss1712339773, ss2634999255, ss3642773432, ss3847336309 NC_000001.9:66461696:A:G NC_000001.11:66223425:A:G (self)
1932952, 1058405, 10795, 749705, 1534168, 451731, 1214350, 400212, 27755, 492133, 1027273, 274480, 2268212, 1058405, 221207, ss218428225, ss230566330, ss238254822, ss480249818, ss480988529, ss484917524, ss536968523, ss554202008, ss648072126, ss778834979, ss782905072, ss783868370, ss832159918, ss832830159, ss834295470, ss975242154, ss1067949981, ss1291203456, ss1425835608, ss1574117005, ss1600339457, ss1643333490, ss1751929912, ss1794489838, ss1918450203, ss1966765238, ss2019742311, ss2147758126, ss2632526245, ss2697675340, ss2756026164, ss2984861977, ss2985515188, ss2986941680, ss3343490590, ss3626116295, ss3630561864, ss3632894713, ss3633589418, ss3634328684, ss3635283217, ss3636005092, ss3637033643, ss3637761760, ss3640036045, ss3640982288, ss3641276252, ss3653634742, ss3655011457, ss3727115347, ss3744629650, ss3746300899, ss3772130985, ss3783431660, ss3789086444, ss3793959222, ss3826212346, ss3836493525, ss3849010293, ss3894036956, ss3984801828, ss4016915023, ss5144298905, ss5314621938, ss5319224435, ss5505877861, ss5624207585, ss5625684120, ss5799486627, ss5832064404, ss5937522042 NC_000001.10:66689108:A:G NC_000001.11:66223425:A:G (self)
2477577, 13634337, 86467, 3007906, 16084456, 15611652952, ss2163152634, ss3023632714, ss3646680202, ss3686925186, ss3799307784, ss3841900041, ss4452478121, ss5242539622, ss5443575373, ss5514951642, ss5669170802, ss5800664324, ss5848939611, ss5908572335 NC_000001.11:66223425:A:G NC_000001.11:66223425:A:G (self)
ss24247677, ss28532810, ss66476560, ss66832675, ss67185975, ss67560440, ss70664047, ss71225604, ss75894948, ss76288524, ss79090995, ss85385744, ss99214390, ss102748647, ss121797114, ss153677078, ss155112218, ss159318121, ss160443106, ss170782342, ss172827289, ss173137248 NT_032977.9:36661026:A:G NC_000001.11:66223425:A:G (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs17423910
PMID Title Author Year Journal
25919455 Investigating the Role of Gene-Gene Interactions in TB Susceptibility. Daya M et al. 2014 PloS one
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07