Name: rs1884
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1884

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr11:113009875 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: G>A / G>C
Variation Type: SNV Single Nucleotide Variation
Frequency: C=0.251819 (66654/264690, TOPMED)
C=0.250754 (35095/139958, GnomAD)
C=0.48482 (13700/28258, 14KJPN) (+ 16 more)
C=0.26033 (4802/18446, ALFA)
C=0.48341 (8101/16758, 8.3KJPN)
C=0.3518 (2253/6404, 1000G_30x)
C=0.3586 (1796/5008, 1000G)
C=0.3163 (1417/4480, Estonian)
C=0.2413 (930/3854, ALSPAC)
C=0.2487 (922/3708, TWINSUK)
G=0.4505 (1320/2930, KOREAN)
C=0.244 (244/998, GoNL)
C=0.383 (230/600, NorthernSweden)
C=0.320 (105/328, HapMap)
G=0.359 (117/326, SGDP_PRJ)
C=0.306 (66/216, Qatari)
G=0.476 (100/210, Vietnamese)
C=0.28 (11/40, GENOME_DK)
G=0.43 (12/28, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: NCAM1 : Intron Variant
Publications: 2 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	18446	G=0.73967	A=0.00000, C=0.26033
European	Sub	14010	G=0.72527	A=0.00000, C=0.27473
African	Sub	2778	G=0.8359	A=0.0000, C=0.1641
African Others	Sub	108	G=0.815	A=0.000, C=0.185
African American	Sub	2670	G=0.8367	A=0.0000, C=0.1633
Asian	Sub	112	G=0.420	A=0.000, C=0.580
East Asian	Sub	86	G=0.43	A=0.00, C=0.57
Other Asian	Sub	26	G=0.38	A=0.00, C=0.62
Latin American 1	Sub	146	G=0.753	A=0.000, C=0.247
Latin American 2	Sub	610	G=0.716	A=0.000, C=0.284
South Asian	Sub	98	G=0.48	A=0.00, C=0.52
Other	Sub	692	G=0.751	A=0.000, C=0.249

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	G=0.748181	C=0.251819
gnomAD - Genomes	Global	Study-wide	139958	G=0.749246	C=0.250754
gnomAD - Genomes	European	Sub	75808	G=0.72775	C=0.27225
gnomAD - Genomes	African	Sub	41926	G=0.81780	C=0.18220
gnomAD - Genomes	American	Sub	13636	G=0.74296	C=0.25704
gnomAD - Genomes	Ashkenazi Jewish	Sub	3322	G=0.6999	C=0.3001
gnomAD - Genomes	East Asian	Sub	3122	G=0.4545	C=0.5455
gnomAD - Genomes	Other	Sub	2144	G=0.7146	C=0.2854
14KJPN	JAPANESE	Study-wide	28258	G=0.51518	C=0.48482
Allele Frequency Aggregator	Total	Global	18446	G=0.73967	A=0.00000, C=0.26033
Allele Frequency Aggregator	European	Sub	14010	G=0.72527	A=0.00000, C=0.27473
Allele Frequency Aggregator	African	Sub	2778	G=0.8359	A=0.0000, C=0.1641
Allele Frequency Aggregator	Other	Sub	692	G=0.751	A=0.000, C=0.249
Allele Frequency Aggregator	Latin American 2	Sub	610	G=0.716	A=0.000, C=0.284
Allele Frequency Aggregator	Latin American 1	Sub	146	G=0.753	A=0.000, C=0.247
Allele Frequency Aggregator	Asian	Sub	112	G=0.420	A=0.000, C=0.580
Allele Frequency Aggregator	South Asian	Sub	98	G=0.48	A=0.00, C=0.52
8.3KJPN	JAPANESE	Study-wide	16758	G=0.51659	C=0.48341
1000Genomes_30x	Global	Study-wide	6404	G=0.6482	C=0.3518
1000Genomes_30x	African	Sub	1786	G=0.8259	C=0.1741
1000Genomes_30x	Europe	Sub	1266	G=0.7322	C=0.2678
1000Genomes_30x	South Asian	Sub	1202	G=0.4401	C=0.5599
1000Genomes_30x	East Asian	Sub	1170	G=0.4744	C=0.5256
1000Genomes_30x	American	Sub	980	G=0.679	C=0.321
1000Genomes	Global	Study-wide	5008	G=0.6414	C=0.3586
1000Genomes	African	Sub	1322	G=0.8321	C=0.1679
1000Genomes	East Asian	Sub	1008	G=0.4663	C=0.5337
1000Genomes	Europe	Sub	1006	G=0.7296	C=0.2704
1000Genomes	South Asian	Sub	978	G=0.442	C=0.558
1000Genomes	American	Sub	694	G=0.686	C=0.314
Genetic variation in the Estonian population	Estonian	Study-wide	4480	G=0.6837	C=0.3163
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.7587	C=0.2413
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.7513	C=0.2487
KOREAN population from KRGDB	KOREAN	Study-wide	2930	G=0.4505	C=0.5495
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	G=0.756	C=0.244
Northern Sweden	ACPOP	Study-wide	600	G=0.617	C=0.383
HapMap	Global	Study-wide	328	G=0.680	C=0.320
HapMap	African	Sub	120	G=0.800	C=0.200
HapMap	American	Sub	120	G=0.708	C=0.292
HapMap	Asian	Sub	88	G=0.48	C=0.52
SGDP_PRJ	Global	Study-wide	326	G=0.359	C=0.641
Qatari	Global	Study-wide	216	G=0.694	C=0.306
A Vietnamese Genetic Variation Database	Global	Study-wide	210	G=0.476	C=0.524
The Danish reference pan genome	Danish	Study-wide	40	G=0.72	C=0.28
Siberian	Global	Study-wide	28	G=0.43	C=0.57

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 11	NC_000011.10:g.113009875G>A
GRCh38.p14 chr 11	NC_000011.10:g.113009875G>C
GRCh37.p13 chr 11	NC_000011.9:g.112880597G>A
GRCh37.p13 chr 11	NC_000011.9:g.112880597G>C
NCAM1 RefSeqGene	NG_032036.2:g.53457G>A
NCAM1 RefSeqGene	NG_032036.2:g.53457G>C
NCAM1 RefSeqGene	NG_032036.1:g.53629G>A
NCAM1 RefSeqGene	NG_032036.1:g.53629G>C
GRCh37.p13 chr 11 fix patch HG306_PATCH	NW_003871078.1:g.192601G>A
GRCh37.p13 chr 11 fix patch HG306_PATCH	NW_003871078.1:g.192601G>C

Gene: NCAM1, neural cell adhesion molecule 1 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
NCAM1 transcript variant 1	NM_000615.7:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 3	NM_001076682.4:c.52+48211… NM_001076682.4:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 5	NM_001242607.2:c.52+48211… NM_001242607.2:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 4	NM_001242608.2:c.52+48211… NM_001242608.2:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 6	NM_001386289.1:c.52+48211… NM_001386289.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 7	NM_001386290.1:c.52+48211… NM_001386290.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 8	NM_001386291.1:c.52+48211… NM_001386291.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 9	NM_001386292.1:c.52+48211… NM_001386292.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 10	NM_001400603.1:c.52+48211… NM_001400603.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 11	NM_001400604.1:c.52+48211… NM_001400604.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 12	NM_001400605.1:c.52+48211… NM_001400605.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 13	NM_001400606.1:c.52+48211… NM_001400606.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 14	NM_001400607.1:c.52+48211… NM_001400607.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 15	NM_001400608.1:c.52+48211… NM_001400608.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 16	NM_001400609.1:c.52+48211… NM_001400609.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 17	NM_001400610.1:c.52+48211… NM_001400610.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 18	NM_001400611.1:c.52+48211… NM_001400611.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 19	NM_001400612.1:c.52+48211… NM_001400612.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 20	NM_001400613.1:c.52+48211… NM_001400613.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 21	NM_001400614.1:c.52+48211… NM_001400614.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 22	NM_001400615.1:c.52+48211… NM_001400615.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 23	NM_001400616.1:c.52+48211… NM_001400616.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 24	NM_001400617.1:c.52+48211… NM_001400617.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 25	NM_001400618.1:c.52+48211… NM_001400618.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 26	NM_001400619.1:c.52+48211… NM_001400619.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 27	NM_001400620.1:c.52+48211… NM_001400620.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 28	NM_001400621.1:c.52+48211… NM_001400621.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 29	NM_001400622.1:c.52+48211… NM_001400622.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 30	NM_001400623.1:c.52+48211… NM_001400623.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 31	NM_001400624.1:c.52+48211… NM_001400624.1:c.52+48211G>A	N/A	Intron Variant
NCAM1 transcript variant 2	NM_181351.5:c.52+48211G>A	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	G=	A	C
GRCh38.p14 chr 11	NC_000011.10:g.113009875=	NC_000011.10:g.113009875G>A	NC_000011.10:g.113009875G>C
GRCh37.p13 chr 11	NC_000011.9:g.112880597=	NC_000011.9:g.112880597G>A	NC_000011.9:g.112880597G>C
NCAM1 RefSeqGene	NG_032036.2:g.53457=	NG_032036.2:g.53457G>A	NG_032036.2:g.53457G>C
NCAM1 RefSeqGene	NG_032036.1:g.53629=	NG_032036.1:g.53629G>A	NG_032036.1:g.53629G>C
GRCh37.p13 chr 11 fix patch HG306_PATCH	NW_003871078.1:g.192601=	NW_003871078.1:g.192601G>A	NW_003871078.1:g.192601G>C
NCAM1 transcript variant 1	NM_000615.6:c.53+48211=	NM_000615.6:c.53+48211G>A	NM_000615.6:c.53+48211G>C
NCAM1 transcript variant 1	NM_000615.7:c.52+48211=	NM_000615.7:c.52+48211G>A	NM_000615.7:c.52+48211G>C
NCAM1 transcript variant 3	NM_001076682.3:c.53+48211=	NM_001076682.3:c.53+48211G>A	NM_001076682.3:c.53+48211G>C
NCAM1 transcript variant 3	NM_001076682.4:c.52+48211=	NM_001076682.4:c.52+48211G>A	NM_001076682.4:c.52+48211G>C
NCAM1 transcript variant 5	NM_001242607.1:c.53+48211=	NM_001242607.1:c.53+48211G>A	NM_001242607.1:c.53+48211G>C
NCAM1 transcript variant 5	NM_001242607.2:c.52+48211=	NM_001242607.2:c.52+48211G>A	NM_001242607.2:c.52+48211G>C
NCAM1 transcript variant 4	NM_001242608.1:c.53+48211=	NM_001242608.1:c.53+48211G>A	NM_001242608.1:c.53+48211G>C
NCAM1 transcript variant 4	NM_001242608.2:c.52+48211=	NM_001242608.2:c.52+48211G>A	NM_001242608.2:c.52+48211G>C
NCAM1 transcript variant 6	NM_001386289.1:c.52+48211=	NM_001386289.1:c.52+48211G>A	NM_001386289.1:c.52+48211G>C
NCAM1 transcript variant 7	NM_001386290.1:c.52+48211=	NM_001386290.1:c.52+48211G>A	NM_001386290.1:c.52+48211G>C
NCAM1 transcript variant 8	NM_001386291.1:c.52+48211=	NM_001386291.1:c.52+48211G>A	NM_001386291.1:c.52+48211G>C
NCAM1 transcript variant 9	NM_001386292.1:c.52+48211=	NM_001386292.1:c.52+48211G>A	NM_001386292.1:c.52+48211G>C
NCAM1 transcript variant 10	NM_001400603.1:c.52+48211=	NM_001400603.1:c.52+48211G>A	NM_001400603.1:c.52+48211G>C
NCAM1 transcript variant 11	NM_001400604.1:c.52+48211=	NM_001400604.1:c.52+48211G>A	NM_001400604.1:c.52+48211G>C
NCAM1 transcript variant 12	NM_001400605.1:c.52+48211=	NM_001400605.1:c.52+48211G>A	NM_001400605.1:c.52+48211G>C
NCAM1 transcript variant 13	NM_001400606.1:c.52+48211=	NM_001400606.1:c.52+48211G>A	NM_001400606.1:c.52+48211G>C
NCAM1 transcript variant 14	NM_001400607.1:c.52+48211=	NM_001400607.1:c.52+48211G>A	NM_001400607.1:c.52+48211G>C
NCAM1 transcript variant 15	NM_001400608.1:c.52+48211=	NM_001400608.1:c.52+48211G>A	NM_001400608.1:c.52+48211G>C
NCAM1 transcript variant 16	NM_001400609.1:c.52+48211=	NM_001400609.1:c.52+48211G>A	NM_001400609.1:c.52+48211G>C
NCAM1 transcript variant 17	NM_001400610.1:c.52+48211=	NM_001400610.1:c.52+48211G>A	NM_001400610.1:c.52+48211G>C
NCAM1 transcript variant 18	NM_001400611.1:c.52+48211=	NM_001400611.1:c.52+48211G>A	NM_001400611.1:c.52+48211G>C
NCAM1 transcript variant 19	NM_001400612.1:c.52+48211=	NM_001400612.1:c.52+48211G>A	NM_001400612.1:c.52+48211G>C
NCAM1 transcript variant 20	NM_001400613.1:c.52+48211=	NM_001400613.1:c.52+48211G>A	NM_001400613.1:c.52+48211G>C
NCAM1 transcript variant 21	NM_001400614.1:c.52+48211=	NM_001400614.1:c.52+48211G>A	NM_001400614.1:c.52+48211G>C
NCAM1 transcript variant 22	NM_001400615.1:c.52+48211=	NM_001400615.1:c.52+48211G>A	NM_001400615.1:c.52+48211G>C
NCAM1 transcript variant 23	NM_001400616.1:c.52+48211=	NM_001400616.1:c.52+48211G>A	NM_001400616.1:c.52+48211G>C
NCAM1 transcript variant 24	NM_001400617.1:c.52+48211=	NM_001400617.1:c.52+48211G>A	NM_001400617.1:c.52+48211G>C
NCAM1 transcript variant 25	NM_001400618.1:c.52+48211=	NM_001400618.1:c.52+48211G>A	NM_001400618.1:c.52+48211G>C
NCAM1 transcript variant 26	NM_001400619.1:c.52+48211=	NM_001400619.1:c.52+48211G>A	NM_001400619.1:c.52+48211G>C
NCAM1 transcript variant 27	NM_001400620.1:c.52+48211=	NM_001400620.1:c.52+48211G>A	NM_001400620.1:c.52+48211G>C
NCAM1 transcript variant 28	NM_001400621.1:c.52+48211=	NM_001400621.1:c.52+48211G>A	NM_001400621.1:c.52+48211G>C
NCAM1 transcript variant 29	NM_001400622.1:c.52+48211=	NM_001400622.1:c.52+48211G>A	NM_001400622.1:c.52+48211G>C
NCAM1 transcript variant 30	NM_001400623.1:c.52+48211=	NM_001400623.1:c.52+48211G>A	NM_001400623.1:c.52+48211G>C
NCAM1 transcript variant 31	NM_001400624.1:c.52+48211=	NM_001400624.1:c.52+48211G>A	NM_001400624.1:c.52+48211G>C
NCAM1 transcript variant 2	NM_181351.4:c.53+48211=	NM_181351.4:c.53+48211G>A	NM_181351.4:c.53+48211G>C
NCAM1 transcript variant 2	NM_181351.5:c.52+48211=	NM_181351.5:c.52+48211G>A	NM_181351.5:c.52+48211G>C

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

67 SubSNP, 19 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	WIAF	ss1909	Sep 19, 2000 (36)
2	SC_JCM	ss5946090	Feb 20, 2003 (111)
3	WI_SSAHASNP	ss12173758	Jul 11, 2003 (116)
4	SC_SNP	ss15803931	Feb 27, 2004 (120)
5	PERLEGEN	ss24099507	Sep 20, 2004 (123)
6	ABI	ss38732097	Mar 15, 2006 (126)
7	KRIBB_YJKIM	ss80753403	Dec 16, 2007 (130)
8	BCMHGSC_JDW	ss88799674	Mar 24, 2008 (129)
9	BGI	ss106771340	Feb 06, 2009 (130)
10	1000GENOMES	ss115193806	Jan 25, 2009 (130)
11	ENSEMBL	ss132837085	Dec 01, 2009 (131)
12	GMI	ss156807560	Dec 01, 2009 (131)
13	COMPLETE_GENOMICS	ss170908384	Jul 04, 2010 (132)
14	BUSHMAN	ss203224684	Jul 04, 2010 (132)
15	1000GENOMES	ss225468151	Jul 14, 2010 (132)
16	1000GENOMES	ss235723747	Jul 15, 2010 (132)
17	1000GENOMES	ss242320905	Jul 15, 2010 (132)
18	GMI	ss281175543	May 04, 2012 (137)
19	GMI	ss286459980	Apr 25, 2013 (138)
20	PJP	ss291142327	May 09, 2011 (134)
21	TISHKOFF	ss562833631	Apr 25, 2013 (138)
22	SSMP	ss658356594	Apr 25, 2013 (138)
23	EVA-GONL	ss988975329	Aug 21, 2014 (142)
24	JMKIDD_LAB	ss1078054510	Aug 21, 2014 (142)
25	1000GENOMES	ss1343013077	Aug 21, 2014 (142)
26	DDI	ss1426764797	Apr 09, 2015 (144)
27	EVA_GENOME_DK	ss1575959947	Apr 09, 2015 (144)
28	EVA_DECODE	ss1598641163	Apr 01, 2015 (144)
29	EVA_UK10K_ALSPAC	ss1627487889	Apr 09, 2015 (144)
30	EVA_UK10K_TWINSUK	ss1670481922	Apr 09, 2015 (144)
31	HAMMER_LAB	ss1807002681	Sep 11, 2015 (146)
32	WEILL_CORNELL_DGM	ss1932336572	Feb 17, 2016 (147)
33	GENOMED	ss1967461801	Sep 28, 2016 (149)
34	JJLAB	ss2026912303	Sep 28, 2016 (149)
35	USC_VALOUEV	ss2155224842	Oct 12, 2018 (152)
36	HUMAN_LONGEVITY	ss2185805513	Dec 20, 2016 (150)
37	SYSTEMSBIOZJU	ss2627930875	Oct 12, 2018 (152)
38	GRF	ss2699534768	Oct 12, 2018 (152)
39	GNOMAD	ss2904593620	Oct 12, 2018 (152)
40	SWEGEN	ss3008799451	Oct 12, 2018 (152)
41	BIOINF_KMB_FNS_UNIBA	ss3027256792	Nov 08, 2017 (151)
42	CSHL	ss3349800357	Oct 12, 2018 (152)
43	EGCUT_WGS	ss3676126484	Jul 13, 2019 (153)
44	EVA_DECODE	ss3692621993	Jul 13, 2019 (153)
45	ACPOP	ss3738550234	Jul 13, 2019 (153)
46	EVA	ss3749826345	Jul 13, 2019 (153)
47	KHV_HUMAN_GENOMES	ss3815157056	Jul 13, 2019 (153)
48	EVA	ss3832844929	Apr 26, 2020 (154)
49	EVA	ss3839984739	Apr 26, 2020 (154)
50	EVA	ss3845466452	Apr 26, 2020 (154)
51	SGDP_PRJ	ss3877161778	Apr 26, 2020 (154)
52	KRGDB	ss3925619470	Apr 26, 2020 (154)
53	GNOMAD	ss4242755104	Apr 26, 2021 (155)
54	TOPMED	ss4900399153	Apr 26, 2021 (155)
55	TOMMO_GENOMICS	ss5203943208	Apr 26, 2021 (155)
56	1000G_HIGH_COVERAGE	ss5288943736	Oct 16, 2022 (156)
57	EVA	ss5402318667	Oct 16, 2022 (156)
58	HUGCELL_USP	ss5483928351	Oct 16, 2022 (156)
59	EVA	ss5510525985	Oct 16, 2022 (156)
60	1000G_HIGH_COVERAGE	ss5585450185	Oct 16, 2022 (156)
61	SANFORD_IMAGENETICS	ss5652096437	Oct 16, 2022 (156)
62	TOMMO_GENOMICS	ss5752406109	Oct 16, 2022 (156)
63	YY_MCH	ss5812786970	Oct 16, 2022 (156)
64	EVA	ss5837245710	Oct 16, 2022 (156)
65	EVA	ss5850155909	Oct 16, 2022 (156)
66	EVA	ss5921705208	Oct 16, 2022 (156)
67	EVA	ss5943426120	Oct 16, 2022 (156)
68	1000Genomes	NC_000011.9 - 112880597	Oct 12, 2018 (152)
69	1000Genomes_30x	NC_000011.10 - 113009875	Oct 16, 2022 (156)
70	The Avon Longitudinal Study of Parents and Children	NC_000011.9 - 112880597	Oct 12, 2018 (152)
71	Genetic variation in the Estonian population	NC_000011.9 - 112880597	Oct 12, 2018 (152)
72	The Danish reference pan genome	NC_000011.9 - 112880597	Apr 26, 2020 (154)
73	gnomAD - Genomes	NC_000011.10 - 113009875	Apr 26, 2021 (155)
74	Genome of the Netherlands Release 5	NC_000011.9 - 112880597	Apr 26, 2020 (154)
75	HapMap	NC_000011.10 - 113009875	Apr 26, 2020 (154)
76	KOREAN population from KRGDB	NC_000011.9 - 112880597	Apr 26, 2020 (154)
77	Northern Sweden	NC_000011.9 - 112880597	Jul 13, 2019 (153)
78	Qatari	NC_000011.9 - 112880597	Apr 26, 2020 (154)
79	SGDP_PRJ	NC_000011.9 - 112880597	Apr 26, 2020 (154)
80	Siberian	NC_000011.9 - 112880597	Apr 26, 2020 (154)
81	8.3KJPN	NC_000011.9 - 112880597	Apr 26, 2021 (155)
82	14KJPN	NC_000011.10 - 113009875	Oct 16, 2022 (156)
83	TopMed	NC_000011.10 - 113009875	Apr 26, 2021 (155)
84	UK 10K study - Twins	NC_000011.9 - 112880597	Oct 12, 2018 (152)
85	A Vietnamese Genetic Variation Database	NC_000011.9 - 112880597	Jul 13, 2019 (153)
86	ALFA	NC_000011.10 - 113009875	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs61129165	May 26, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
13085215201	NC_000011.10:113009874:G:A	NC_000011.10:113009874:G:A	(self)
ss88799674, ss115193806, ss170908384, ss203224684, ss281175543, ss286459980, ss291142327, ss1598641163	NC_000011.8:112385806:G:C	NC_000011.10:113009874:G:C	(self)
55597142, 30859789, 21864732, 2740349, 13771958, 32796864, 11835099, 14378502, 29178758, 7741196, 61912515, 30859789, 6849010, ss225468151, ss235723747, ss242320905, ss562833631, ss658356594, ss988975329, ss1078054510, ss1343013077, ss1426764797, ss1575959947, ss1627487889, ss1670481922, ss1807002681, ss1932336572, ss1967461801, ss2026912303, ss2155224842, ss2627930875, ss2699534768, ss2904593620, ss3008799451, ss3349800357, ss3676126484, ss3738550234, ss3749826345, ss3832844929, ss3839984739, ss3877161778, ss3925619470, ss5203943208, ss5402318667, ss5510525985, ss5652096437, ss5837245710, ss5943426120	NC_000011.9:112880596:G:C	NC_000011.10:113009874:G:C	(self)
72976120, 392314271, 701598, 86243213, 115944809, 13085215201, ss2185805513, ss3027256792, ss3692621993, ss3815157056, ss3845466452, ss4242755104, ss4900399153, ss5288943736, ss5483928351, ss5585450185, ss5752406109, ss5812786970, ss5850155909, ss5921705208	NC_000011.10:113009874:G:C	NC_000011.10:113009874:G:C	(self)
ss12173758	NT_033899.5:16424269:G:C	NC_000011.10:113009874:G:C	(self)
ss15803931	NT_033899.6:16424380:G:C	NC_000011.10:113009874:G:C	(self)
ss1909, ss5946090, ss24099507, ss38732097, ss80753403, ss106771340, ss132837085, ss156807560	NT_033899.8:16443012:G:C	NC_000011.10:113009874:G:C	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

2 citations for rs1884

PMID	Title	Author	Year	Journal
20483466	Influence of neuronal cell adhesion molecule (NCAM1) variants on suicidal behaviour and correlated traits.	Giegling I et al.	2010	Psychiatry research
21577011	NCAM1, TACR1 and NOS genes and temperament: a study on suicide attempters and controls.	Giegling I et al.	2011	Neuropsychobiology

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs1884