Name: rs2196239
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs2196239

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr20:100014 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: A>C / A>G / A>T
Variation Type: SNV Single Nucleotide Variation
Frequency: A=0.108735 (28781/264690, TOPMED)
A=0.101202 (19669/194354, ALFA)
A=0.106690 (14953/140154, GnomAD) (+ 19 more)
A=0.03231 (913/28258, 14KJPN)
A=0.03204 (537/16760, 8.3KJPN)
A=0.0965 (618/6404, 1000G_30x)
A=0.0927 (464/5008, 1000G)
A=0.1268 (568/4480, Estonian)
A=0.0996 (384/3854, ALSPAC)
A=0.1090 (404/3708, TWINSUK)
A=0.0317 (93/2930, KOREAN)
A=0.1113 (232/2084, HGDP_Stanford)
A=0.0766 (145/1892, HapMap)
A=0.0792 (90/1136, Daghestan)
A=0.112 (112/998, GoNL)
A=0.113 (68/600, NorthernSweden)
A=0.079 (41/522, SGDP_PRJ)
A=0.051 (11/216, Qatari)
A=0.047 (10/214, Vietnamese)
A=0.03 (2/70, Ancient Sardinia)
A=0.07 (4/56, Siberian)
A=0.17 (7/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: None
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	194354	A=0.101202	G=0.898798, T=0.000000
European	Sub	165022	A=0.097133	G=0.902867, T=0.000000
African	Sub	9202	A=0.1065	G=0.8935, T=0.0000
African Others	Sub	324	A=0.127	G=0.873, T=0.000
African American	Sub	8878	A=0.1058	G=0.8942, T=0.0000
Asian	Sub	704	A=0.036	G=0.964, T=0.000
East Asian	Sub	558	A=0.023	G=0.977, T=0.000
Other Asian	Sub	146	A=0.082	G=0.918, T=0.000
Latin American 1	Sub	844	A=0.118	G=0.882, T=0.000
Latin American 2	Sub	6880	A=0.2032	G=0.7968, T=0.0000
South Asian	Sub	5044	A=0.0922	G=0.9078, T=0.0000
Other	Sub	6658	A=0.1009	G=0.8991, T=0.0000

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	A=0.108735	G=0.891265
Allele Frequency Aggregator	Total	Global	194354	A=0.101202	G=0.898798, T=0.000000
Allele Frequency Aggregator	European	Sub	165022	A=0.097133	G=0.902867, T=0.000000
Allele Frequency Aggregator	African	Sub	9202	A=0.1065	G=0.8935, T=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	6880	A=0.2032	G=0.7968, T=0.0000
Allele Frequency Aggregator	Other	Sub	6658	A=0.1009	G=0.8991, T=0.0000
Allele Frequency Aggregator	South Asian	Sub	5044	A=0.0922	G=0.9078, T=0.0000
Allele Frequency Aggregator	Latin American 1	Sub	844	A=0.118	G=0.882, T=0.000
Allele Frequency Aggregator	Asian	Sub	704	A=0.036	G=0.964, T=0.000
gnomAD - Genomes	Global	Study-wide	140154	A=0.106690	G=0.893310
gnomAD - Genomes	European	Sub	75916	A=0.10289	G=0.89711
gnomAD - Genomes	African	Sub	41988	A=0.10879	G=0.89121
gnomAD - Genomes	American	Sub	13646	A=0.15250	G=0.84750
gnomAD - Genomes	Ashkenazi Jewish	Sub	3324	A=0.0593	G=0.9407
gnomAD - Genomes	East Asian	Sub	3132	A=0.0268	G=0.9732
gnomAD - Genomes	Other	Sub	2148	A=0.0987	G=0.9013
14KJPN	JAPANESE	Study-wide	28258	A=0.03231	G=0.96769
8.3KJPN	JAPANESE	Study-wide	16760	A=0.03204	G=0.96796
1000Genomes_30x	Global	Study-wide	6404	A=0.0965	G=0.9035
1000Genomes_30x	African	Sub	1786	A=0.1069	G=0.8931
1000Genomes_30x	Europe	Sub	1266	A=0.0987	G=0.9013
1000Genomes_30x	South Asian	Sub	1202	A=0.0965	G=0.9035
1000Genomes_30x	East Asian	Sub	1170	A=0.0342	G=0.9658
1000Genomes_30x	American	Sub	980	A=0.149	G=0.851
1000Genomes	Global	Study-wide	5008	A=0.0927	G=0.9073
1000Genomes	African	Sub	1322	A=0.1006	G=0.8994
1000Genomes	East Asian	Sub	1008	A=0.0347	G=0.9653
1000Genomes	Europe	Sub	1006	A=0.0934	G=0.9066
1000Genomes	South Asian	Sub	978	A=0.096	G=0.904
1000Genomes	American	Sub	694	A=0.156	G=0.844
Genetic variation in the Estonian population	Estonian	Study-wide	4480	A=0.1268	G=0.8732
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	A=0.0996	G=0.9004
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	A=0.1090	G=0.8910
KOREAN population from KRGDB	KOREAN	Study-wide	2930	A=0.0317	C=0.0000, G=0.9683, T=0.0000
HGDP-CEPH-db Supplement 1	Global	Study-wide	2084	A=0.1113	G=0.8887
HGDP-CEPH-db Supplement 1	Est_Asia	Sub	470	A=0.057	G=0.943
HGDP-CEPH-db Supplement 1	Central_South_Asia	Sub	414	A=0.070	G=0.930
HGDP-CEPH-db Supplement 1	Middle_Est	Sub	350	A=0.031	G=0.969
HGDP-CEPH-db Supplement 1	Europe	Sub	320	A=0.081	G=0.919
HGDP-CEPH-db Supplement 1	Africa	Sub	242	A=0.062	G=0.938
HGDP-CEPH-db Supplement 1	America	Sub	216	A=0.315	G=0.685
HGDP-CEPH-db Supplement 1	Oceania	Sub	72	A=0.78	G=0.22
HapMap	Global	Study-wide	1892	A=0.0766	G=0.9234
HapMap	American	Sub	770	A=0.083	G=0.917
HapMap	African	Sub	692	A=0.085	G=0.915
HapMap	Asian	Sub	254	A=0.047	G=0.953
HapMap	Europe	Sub	176	A=0.057	G=0.943
Genome-wide autozygosity in Daghestan	Global	Study-wide	1136	A=0.0792	G=0.9208
Genome-wide autozygosity in Daghestan	Daghestan	Sub	628	A=0.083	G=0.917
Genome-wide autozygosity in Daghestan	Near_East	Sub	144	A=0.056	G=0.944
Genome-wide autozygosity in Daghestan	Central Asia	Sub	122	A=0.041	G=0.959
Genome-wide autozygosity in Daghestan	Europe	Sub	108	A=0.083	G=0.917
Genome-wide autozygosity in Daghestan	South Asian	Sub	98	A=0.15	G=0.85
Genome-wide autozygosity in Daghestan	Caucasus	Sub	36	A=0.03	G=0.97
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	A=0.112	G=0.888
Northern Sweden	ACPOP	Study-wide	600	A=0.113	G=0.887
SGDP_PRJ	Global	Study-wide	522	A=0.079	G=0.921
Qatari	Global	Study-wide	216	A=0.051	G=0.949
A Vietnamese Genetic Variation Database	Global	Study-wide	214	A=0.047	G=0.953
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	70	A=0.03	G=0.97
Siberian	Global	Study-wide	56	A=0.07	G=0.93
The Danish reference pan genome	Danish	Study-wide	40	A=0.17	G=0.82

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 20	NC_000020.11:g.100014A>C
GRCh38.p14 chr 20	NC_000020.11:g.100014A>G
GRCh38.p14 chr 20	NC_000020.11:g.100014A>T
GRCh37.p13 chr 20	NC_000020.10:g.80655A>C
GRCh37.p13 chr 20	NC_000020.10:g.80655A>G
GRCh37.p13 chr 20	NC_000020.10:g.80655A>T

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	A=	C	G	T
GRCh38.p14 chr 20	NC_000020.11:g.100014=	NC_000020.11:g.100014A>C	NC_000020.11:g.100014A>G	NC_000020.11:g.100014A>T
GRCh37.p13 chr 20	NC_000020.10:g.80655=	NC_000020.10:g.80655A>C	NC_000020.10:g.80655A>G	NC_000020.10:g.80655A>T

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

126 SubSNP, 22 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	TSC-CSHL	ss3136293	Jun 15, 2001 (96)
2	TSC-CSHL	ss5143391	Oct 08, 2002 (108)
3	WI_SSAHASNP	ss6646698	Feb 20, 2003 (111)
4	SC_SNP	ss8358091	Apr 21, 2003 (114)
5	CSHL-HAPMAP	ss16891140	Feb 27, 2004 (120)
6	CSHL-HAPMAP	ss19474141	Feb 27, 2004 (120)
7	SSAHASNP	ss21782371	Apr 05, 2004 (121)
8	PERLEGEN	ss24590969	Sep 20, 2004 (123)
9	ABI	ss41440884	Mar 13, 2006 (126)
10	ILLUMINA	ss67232839	Nov 29, 2006 (127)
11	ILLUMINA	ss67628564	Nov 29, 2006 (127)
12	ILLUMINA	ss68198802	Dec 12, 2006 (127)
13	PERLEGEN	ss69232544	May 16, 2007 (127)
14	ILLUMINA	ss70711174	May 24, 2008 (130)
15	ILLUMINA	ss71278487	May 16, 2007 (127)
16	ILLUMINA	ss75580350	Dec 06, 2007 (129)
17	KRIBB_YJKIM	ss83994492	Dec 15, 2007 (130)
18	BCMHGSC_JDW	ss91611624	Mar 24, 2008 (129)
19	HUMANGENOME_JCVI	ss96180631	Feb 04, 2009 (130)
20	BGI	ss106173476	Feb 04, 2009 (130)
21	1000GENOMES	ss111581109	Jan 25, 2009 (130)
22	1000GENOMES	ss115345992	Jan 25, 2009 (130)
23	ILLUMINA-UK	ss117452079	Feb 14, 2009 (130)
24	ENSEMBL	ss135728041	Dec 01, 2009 (131)
25	ENSEMBL	ss138196762	Dec 01, 2009 (131)
26	ILLUMINA	ss153879644	Dec 01, 2009 (131)
27	GMI	ss156059138	Dec 01, 2009 (131)
28	ILLUMINA	ss159367258	Dec 01, 2009 (131)
29	ILLUMINA	ss160513390	Dec 01, 2009 (131)
30	COMPLETE_GENOMICS	ss167637488	Jul 04, 2010 (132)
31	COMPLETE_GENOMICS	ss168828603	Jul 04, 2010 (132)
32	COMPLETE_GENOMICS	ss171804882	Jul 04, 2010 (132)
33	ILLUMINA	ss173173185	Jul 04, 2010 (132)
34	BUSHMAN	ss203804025	Jul 04, 2010 (132)
35	1000GENOMES	ss228210669	Jul 14, 2010 (132)
36	1000GENOMES	ss237729956	Jul 15, 2010 (132)
37	1000GENOMES	ss243923476	Jul 15, 2010 (132)
38	BL	ss255419703	May 09, 2011 (134)
39	GMI	ss283268966	May 04, 2012 (137)
40	GMI	ss287408440	Apr 25, 2013 (138)
41	PJP	ss292559585	May 09, 2011 (134)
42	ILLUMINA	ss480459743	May 04, 2012 (137)
43	ILLUMINA	ss480473874	May 04, 2012 (137)
44	ILLUMINA	ss481267833	Sep 08, 2015 (146)
45	ILLUMINA	ss485027326	May 04, 2012 (137)
46	ILLUMINA	ss537052840	Sep 08, 2015 (146)
47	TISHKOFF	ss566082496	Apr 25, 2013 (138)
48	SSMP	ss661953428	Apr 25, 2013 (138)
49	ILLUMINA	ss778484956	Aug 21, 2014 (142)
50	ILLUMINA	ss782959943	Aug 21, 2014 (142)
51	ILLUMINA	ss783922044	Aug 21, 2014 (142)
52	ILLUMINA	ss832216113	Apr 01, 2015 (144)
53	ILLUMINA	ss832879102	Aug 21, 2014 (142)
54	ILLUMINA	ss833469932	Aug 21, 2014 (142)
55	ILLUMINA	ss833940876	Aug 21, 2014 (142)
56	EVA-GONL	ss994456809	Aug 21, 2014 (142)
57	JMKIDD_LAB	ss1082009579	Aug 21, 2014 (142)
58	1000GENOMES	ss1363766175	Aug 21, 2014 (142)
59	HAMMER_LAB	ss1397760819	Sep 08, 2015 (146)
60	DDI	ss1428970668	Apr 01, 2015 (144)
61	EVA_GENOME_DK	ss1579402605	Apr 01, 2015 (144)
62	EVA_UK10K_ALSPAC	ss1638249313	Apr 01, 2015 (144)
63	EVA_UK10K_TWINSUK	ss1681243346	Apr 01, 2015 (144)
64	EVA_DECODE	ss1698510363	Apr 01, 2015 (144)
65	EVA_SVP	ss1713672357	Apr 01, 2015 (144)
66	ILLUMINA	ss1752398794	Sep 08, 2015 (146)
67	HAMMER_LAB	ss1809383628	Sep 08, 2015 (146)
68	WEILL_CORNELL_DGM	ss1937965403	Feb 12, 2016 (147)
69	GENOMED	ss1969071134	Jul 19, 2016 (147)
70	JJLAB	ss2029757279	Sep 14, 2016 (149)
71	USC_VALOUEV	ss2158311851	Dec 20, 2016 (150)
72	HUMAN_LONGEVITY	ss2240713962	Dec 20, 2016 (150)
73	SYSTEMSBIOZJU	ss2629376464	Nov 08, 2017 (151)
74	ILLUMINA	ss2633765393	Nov 08, 2017 (151)
75	GRF	ss2703983124	Nov 08, 2017 (151)
76	GNOMAD	ss2964603252	Nov 08, 2017 (151)
77	SWEGEN	ss3017743930	Nov 08, 2017 (151)
78	BIOINF_KMB_FNS_UNIBA	ss3028710416	Nov 08, 2017 (151)
79	CSHL	ss3352380195	Nov 08, 2017 (151)
80	ILLUMINA	ss3628330936	Oct 12, 2018 (152)
81	ILLUMINA	ss3631723821	Oct 12, 2018 (152)
82	ILLUMINA	ss3633240872	Oct 12, 2018 (152)
83	ILLUMINA	ss3633954496	Oct 12, 2018 (152)
84	ILLUMINA	ss3634821833	Oct 12, 2018 (152)
85	ILLUMINA	ss3635639786	Oct 12, 2018 (152)
86	ILLUMINA	ss3636511730	Oct 12, 2018 (152)
87	ILLUMINA	ss3637391840	Oct 12, 2018 (152)
88	ILLUMINA	ss3638329492	Oct 12, 2018 (152)
89	ILLUMINA	ss3639168157	Oct 12, 2018 (152)
90	ILLUMINA	ss3639887864	Oct 12, 2018 (152)
91	ILLUMINA	ss3640529131	Oct 12, 2018 (152)
92	ILLUMINA	ss3643293419	Oct 12, 2018 (152)
93	ILLUMINA	ss3643935693	Oct 12, 2018 (152)
94	URBANLAB	ss3650952975	Oct 12, 2018 (152)
95	EGCUT_WGS	ss3684456574	Jul 13, 2019 (153)
96	EVA_DECODE	ss3706405309	Jul 13, 2019 (153)
97	ACPOP	ss3743178929	Jul 13, 2019 (153)
98	ILLUMINA	ss3745121729	Jul 13, 2019 (153)
99	EVA	ss3758326156	Jul 13, 2019 (153)
100	ILLUMINA	ss3772618048	Jul 13, 2019 (153)
101	PACBIO	ss3788576779	Jul 13, 2019 (153)
102	PACBIO	ss3793480317	Jul 13, 2019 (153)
103	PACBIO	ss3798367465	Jul 13, 2019 (153)
104	KHV_HUMAN_GENOMES	ss3821499086	Jul 13, 2019 (153)
105	EVA	ss3835544964	Apr 27, 2020 (154)
106	EVA	ss3841395560	Apr 27, 2020 (154)
107	EVA	ss3846902823	Apr 27, 2020 (154)
108	HGDP	ss3847657383	Apr 27, 2020 (154)
109	SGDP_PRJ	ss3888570425	Apr 27, 2020 (154)
110	KRGDB	ss3938747195	Apr 27, 2020 (154)
111	EVA	ss3985861771	Apr 27, 2021 (155)
112	TOPMED	ss5079737557	Apr 27, 2021 (155)
113	TOMMO_GENOMICS	ss5228505920	Apr 27, 2021 (155)
114	1000G_HIGH_COVERAGE	ss5307820620	Oct 13, 2022 (156)
115	EVA	ss5315987147	Oct 13, 2022 (156)
116	EVA	ss5435783461	Oct 13, 2022 (156)
117	HUGCELL_USP	ss5500246004	Oct 13, 2022 (156)
118	1000G_HIGH_COVERAGE	ss5613777108	Oct 13, 2022 (156)
119	SANFORD_IMAGENETICS	ss5662711475	Oct 13, 2022 (156)
120	TOMMO_GENOMICS	ss5787397730	Oct 13, 2022 (156)
121	EVA	ss5800013150	Oct 13, 2022 (156)
122	YY_MCH	ss5817748685	Oct 13, 2022 (156)
123	EVA	ss5845337298	Oct 13, 2022 (156)
124	EVA	ss5853034222	Oct 13, 2022 (156)
125	EVA	ss5922371793	Oct 13, 2022 (156)
126	EVA	ss5957607125	Oct 13, 2022 (156)
127	1000Genomes	NC_000020.10 - 80655	Oct 12, 2018 (152)
128	1000Genomes_30x	NC_000020.11 - 100014	Oct 13, 2022 (156)
129	The Avon Longitudinal Study of Parents and Children	NC_000020.10 - 80655	Oct 12, 2018 (152)
130	Genome-wide autozygosity in Daghestan	NC_000020.9 - 28655	Apr 27, 2020 (154)
131	Genetic variation in the Estonian population	NC_000020.10 - 80655	Oct 12, 2018 (152)
132	The Danish reference pan genome	NC_000020.10 - 80655	Apr 27, 2020 (154)
133	gnomAD - Genomes	NC_000020.11 - 100014	Apr 27, 2021 (155)
134	Genome of the Netherlands Release 5	NC_000020.10 - 80655	Apr 27, 2020 (154)
135	HGDP-CEPH-db Supplement 1	NC_000020.9 - 28655	Apr 27, 2020 (154)
136	HapMap	NC_000020.11 - 100014	Apr 27, 2020 (154)
137	KOREAN population from KRGDB	NC_000020.10 - 80655	Apr 27, 2020 (154)
138	Northern Sweden	NC_000020.10 - 80655	Jul 13, 2019 (153)
139	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000020.10 - 80655	Apr 27, 2021 (155)
140	Qatari	NC_000020.10 - 80655	Apr 27, 2020 (154)
141	SGDP_PRJ	NC_000020.10 - 80655	Apr 27, 2020 (154)
142	Siberian	NC_000020.10 - 80655	Apr 27, 2020 (154)
143	8.3KJPN	NC_000020.10 - 80655	Apr 27, 2021 (155)
144	14KJPN	NC_000020.11 - 100014	Oct 13, 2022 (156)
145	TopMed	NC_000020.11 - 100014	Apr 27, 2021 (155)
146	UK 10K study - Twins	NC_000020.10 - 80655	Oct 12, 2018 (152)
147	A Vietnamese Genetic Variation Database	NC_000020.10 - 80655	Jul 13, 2019 (153)
148	ALFA	NC_000020.11 - 100014	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs17685875	Oct 07, 2004 (123)
rs58248989	May 24, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
45924589, ss3938747195	NC_000020.10:80654:A:C	NC_000020.11:100013:A:C	(self)
275037, 335275, ss91611624, ss111581109, ss115345992, ss117452079, ss160513390, ss167637488, ss168828603, ss171804882, ss203804025, ss255419703, ss283268966, ss287408440, ss292559585, ss480459743, ss1397760819, ss1698510363, ss1713672357, ss3639168157, ss3639887864, ss3643293419, ss3643935693, ss3847657383	NC_000020.9:28654:A:G	NC_000020.11:100013:A:G	(self)
77195544, 42725629, 30194822, 5567544, 19037635, 45924589, 16463794, 1087698, 20007325, 40587405, 10828205, 86475227, 42725629, 9432398, ss228210669, ss237729956, ss243923476, ss480473874, ss481267833, ss485027326, ss537052840, ss566082496, ss661953428, ss778484956, ss782959943, ss783922044, ss832216113, ss832879102, ss833469932, ss833940876, ss994456809, ss1082009579, ss1363766175, ss1428970668, ss1579402605, ss1638249313, ss1681243346, ss1752398794, ss1809383628, ss1937965403, ss1969071134, ss2029757279, ss2158311851, ss2629376464, ss2633765393, ss2703983124, ss2964603252, ss3017743930, ss3352380195, ss3628330936, ss3631723821, ss3633240872, ss3633954496, ss3634821833, ss3635639786, ss3636511730, ss3637391840, ss3638329492, ss3640529131, ss3684456574, ss3743178929, ss3745121729, ss3758326156, ss3772618048, ss3788576779, ss3793480317, ss3798367465, ss3835544964, ss3841395560, ss3888570425, ss3938747195, ss3985861771, ss5228505920, ss5315987147, ss5435783461, ss5662711475, ss5800013150, ss5845337298, ss5957607125	NC_000020.10:80654:A:G	NC_000020.11:100013:A:G	(self)
101303043, 544382596, 2047596, 121234834, 354846502, 5645399883, ss2240713962, ss3028710416, ss3650952975, ss3706405309, ss3821499086, ss3846902823, ss5079737557, ss5307820620, ss5500246004, ss5613777108, ss5787397730, ss5817748685, ss5853034222, ss5922371793	NC_000020.11:100013:A:G	NC_000020.11:100013:A:G	(self)
ss3136293, ss5143391, ss6646698, ss8358091, ss16891140, ss19474141, ss21782371, ss24590969, ss41440884, ss67232839, ss67628564, ss68198802, ss69232544, ss70711174, ss71278487, ss75580350, ss83994492, ss96180631, ss106173476, ss135728041, ss138196762, ss153879644, ss156059138, ss159367258, ss173173185	NT_011387.8:20654:A:G	NC_000020.11:100013:A:G	(self)
45924589, ss3938747195	NC_000020.10:80654:A:T	NC_000020.11:100013:A:T	(self)
5645399883	NC_000020.11:100013:A:T	NC_000020.11:100013:A:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs2196239

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs2196239