Name: rs2296716
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs2296716

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr1:1562444 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: C>A / C>T
Variation Type: SNV Single Nucleotide Variation
Frequency: T=0.100404 (26576/264690, TOPMED)
T=0.116621 (22485/192804, ALFA)
T=0.35976 (10166/28258, 14KJPN) (+ 18 more)
T=0.35453 (5942/16760, 8.3KJPN)
T=0.1688 (1081/6404, 1000G_30x)
T=0.1783 (893/5008, 1000G)
T=0.0835 (374/4480, Estonian)
T=0.1352 (521/3854, ALSPAC)
T=0.1200 (445/3708, TWINSUK)
T=0.3836 (1124/2930, KOREAN)
T=0.1876 (391/2084, HGDP_Stanford)
T=0.1685 (270/1602, HapMap)
T=0.133 (133/998, GoNL)
T=0.132 (79/600, NorthernSweden)
T=0.079 (17/216, Qatari)
T=0.416 (89/214, Vietnamese)
C=0.380 (70/184, SGDP_PRJ)
T=0.09 (8/92, Ancient Sardinia)
T=0.07 (3/40, GENOME_DK)
C=0.50 (6/12, Siberian)
T=0.50 (6/12, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: SSU72 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	192804	C=0.883379	A=0.000000, T=0.116621
European	Sub	166038	C=0.884141	A=0.000000, T=0.115859
African	Sub	6966	C=0.9800	A=0.0000, T=0.0200
African Others	Sub	264	C=1.000	A=0.000, T=0.000
African American	Sub	6702	C=0.9793	A=0.0000, T=0.0207
Asian	Sub	628	C=0.597	A=0.000, T=0.403
East Asian	Sub	494	C=0.591	A=0.000, T=0.409
Other Asian	Sub	134	C=0.619	A=0.000, T=0.381
Latin American 1	Sub	816	C=0.919	A=0.000, T=0.081
Latin American 2	Sub	6796	C=0.9035	A=0.0000, T=0.0965
South Asian	Sub	5000	C=0.7280	A=0.0000, T=0.2720
Other	Sub	6560	C=0.8820	A=0.0000, T=0.1180

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	C=0.899596	T=0.100404
Allele Frequency Aggregator	Total	Global	192804	C=0.883379	A=0.000000, T=0.116621
Allele Frequency Aggregator	European	Sub	166038	C=0.884141	A=0.000000, T=0.115859
Allele Frequency Aggregator	African	Sub	6966	C=0.9800	A=0.0000, T=0.0200
Allele Frequency Aggregator	Latin American 2	Sub	6796	C=0.9035	A=0.0000, T=0.0965
Allele Frequency Aggregator	Other	Sub	6560	C=0.8820	A=0.0000, T=0.1180
Allele Frequency Aggregator	South Asian	Sub	5000	C=0.7280	A=0.0000, T=0.2720
Allele Frequency Aggregator	Latin American 1	Sub	816	C=0.919	A=0.000, T=0.081
Allele Frequency Aggregator	Asian	Sub	628	C=0.597	A=0.000, T=0.403
14KJPN	JAPANESE	Study-wide	28258	C=0.64024	T=0.35976
8.3KJPN	JAPANESE	Study-wide	16760	C=0.64547	T=0.35453
1000Genomes_30x	Global	Study-wide	6404	C=0.8312	T=0.1688
1000Genomes_30x	African	Sub	1786	C=0.9961	T=0.0039
1000Genomes_30x	Europe	Sub	1266	C=0.8752	T=0.1248
1000Genomes_30x	South Asian	Sub	1202	C=0.7097	T=0.2903
1000Genomes_30x	East Asian	Sub	1170	C=0.6051	T=0.3949
1000Genomes_30x	American	Sub	980	C=0.893	T=0.107
1000Genomes	Global	Study-wide	5008	C=0.8217	T=0.1783
1000Genomes	African	Sub	1322	C=0.9955	T=0.0045
1000Genomes	East Asian	Sub	1008	C=0.5972	T=0.4028
1000Genomes	Europe	Sub	1006	C=0.8767	T=0.1233
1000Genomes	South Asian	Sub	978	C=0.709	T=0.291
1000Genomes	American	Sub	694	C=0.896	T=0.104
Genetic variation in the Estonian population	Estonian	Study-wide	4480	C=0.9165	T=0.0835
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	C=0.8648	T=0.1352
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	C=0.8800	T=0.1200
KOREAN population from KRGDB	KOREAN	Study-wide	2930	C=0.6164	T=0.3836
HGDP-CEPH-db Supplement 1	Global	Study-wide	2084	C=0.8124	T=0.1876
HGDP-CEPH-db Supplement 1	Est_Asia	Sub	470	C=0.606	T=0.394
HGDP-CEPH-db Supplement 1	Central_South_Asia	Sub	414	C=0.734	T=0.266
HGDP-CEPH-db Supplement 1	Middle_Est	Sub	350	C=0.871	T=0.129
HGDP-CEPH-db Supplement 1	Europe	Sub	320	C=0.881	T=0.119
HGDP-CEPH-db Supplement 1	Africa	Sub	242	C=1.000	T=0.000
HGDP-CEPH-db Supplement 1	America	Sub	216	C=0.968	T=0.032
HGDP-CEPH-db Supplement 1	Oceania	Sub	72	C=0.92	T=0.08
HapMap	Global	Study-wide	1602	C=0.8315	T=0.1685
HapMap	American	Sub	766	C=0.815	T=0.185
HapMap	African	Sub	406	C=0.998	T=0.002
HapMap	Asian	Sub	254	C=0.594	T=0.406
HapMap	Europe	Sub	176	C=0.864	T=0.136
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	C=0.867	T=0.133
Northern Sweden	ACPOP	Study-wide	600	C=0.868	T=0.132
Qatari	Global	Study-wide	216	C=0.921	T=0.079
A Vietnamese Genetic Variation Database	Global	Study-wide	214	C=0.584	T=0.416
SGDP_PRJ	Global	Study-wide	184	C=0.380	T=0.620
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	92	C=0.91	T=0.09
The Danish reference pan genome	Danish	Study-wide	40	C=0.93	T=0.07
Siberian	Global	Study-wide	12	C=0.50	T=0.50

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 1	NC_000001.11:g.1562444C>A
GRCh38.p14 chr 1	NC_000001.11:g.1562444C>T
GRCh37.p13 chr 1	NC_000001.10:g.1497824C>A
GRCh37.p13 chr 1	NC_000001.10:g.1497824C>T

Gene: SSU72, SSU72 homolog, RNA polymerase II CTD phosphatase (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
SSU72 transcript	NM_014188.3:c.224+2329G>T	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	C=	A	T
GRCh38.p14 chr 1	NC_000001.11:g.1562444=	NC_000001.11:g.1562444C>A	NC_000001.11:g.1562444C>T
GRCh37.p13 chr 1	NC_000001.10:g.1497824=	NC_000001.10:g.1497824C>A	NC_000001.10:g.1497824C>T
SSU72 transcript	NM_014188.2:c.224+2329=	NM_014188.2:c.224+2329G>T	NM_014188.2:c.224+2329G>A
SSU72 transcript	NM_014188.3:c.224+2329=	NM_014188.3:c.224+2329G>T	NM_014188.3:c.224+2329G>A

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

114 SubSNP, 22 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	YUSUKE	ss3240917	Sep 28, 2001 (100)
2	BCM_SSAHASNP	ss9870514	Jul 11, 2003 (116)
3	SSAHASNP	ss20569979	Apr 05, 2004 (121)
4	PERLEGEN	ss23837270	Sep 20, 2004 (123)
5	ABI	ss44050134	Mar 15, 2006 (126)
6	ILLUMINA	ss66836619	Nov 29, 2006 (127)
7	ILLUMINA	ss67244004	Nov 29, 2006 (127)
8	ILLUMINA	ss67640916	Nov 29, 2006 (127)
9	CSHL-HAPMAP	ss68381024	Jan 12, 2007 (127)
10	ILLUMINA	ss70722342	May 23, 2008 (130)
11	ILLUMINA	ss71290834	May 17, 2007 (127)
12	ILLUMINA	ss75871353	Dec 06, 2007 (129)
13	ILLUMINA	ss79127922	Dec 14, 2007 (130)
14	KRIBB_YJKIM	ss84026954	Dec 14, 2007 (130)
15	BCMHGSC_JDW	ss87159994	Mar 23, 2008 (129)
16	HUMANGENOME_JCVI	ss99179961	Feb 04, 2009 (130)
17	BGI	ss102713802	Feb 04, 2009 (130)
18	1000GENOMES	ss107938697	Jan 22, 2009 (130)
19	ILLUMINA	ss121993446	Dec 01, 2009 (131)
20	ENSEMBL	ss137755166	Dec 01, 2009 (131)
21	ENSEMBL	ss139217176	Dec 01, 2009 (131)
22	ILLUMINA	ss153901275	Dec 01, 2009 (131)
23	ILLUMINA	ss159379086	Dec 01, 2009 (131)
24	ILLUMINA	ss160532221	Dec 01, 2009 (131)
25	ILLUMINA	ss171175815	Jul 04, 2010 (132)
26	ILLUMINA	ss173268107	Jul 04, 2010 (132)
27	1000GENOMES	ss230397285	Jul 14, 2010 (132)
28	1000GENOMES	ss238116665	Jul 15, 2010 (132)
29	GMI	ss275683687	May 04, 2012 (137)
30	GMI	ss283988470	Apr 25, 2013 (138)
31	PJP	ss290494859	May 09, 2011 (134)
32	ILLUMINA	ss480518355	May 04, 2012 (137)
33	ILLUMINA	ss480532648	May 04, 2012 (137)
34	ILLUMINA	ss481343359	Sep 08, 2015 (146)
35	ILLUMINA	ss485056536	May 04, 2012 (137)
36	ILLUMINA	ss537073223	Sep 08, 2015 (146)
37	SSMP	ss647521247	Apr 25, 2013 (138)
38	ILLUMINA	ss778491036	Aug 21, 2014 (142)
39	ILLUMINA	ss782974479	Aug 21, 2014 (142)
40	ILLUMINA	ss783935762	Aug 21, 2014 (142)
41	ILLUMINA	ss825458440	Jul 19, 2016 (147)
42	ILLUMINA	ss832230856	Apr 01, 2015 (144)
43	ILLUMINA	ss832890880	Aug 21, 2014 (142)
44	ILLUMINA	ss833481710	Aug 21, 2014 (142)
45	ILLUMINA	ss833947040	Aug 21, 2014 (142)
46	EVA-GONL	ss974776295	Aug 21, 2014 (142)
47	JMKIDD_LAB	ss1067615767	Aug 21, 2014 (142)
48	1000GENOMES	ss1289369312	Aug 21, 2014 (142)
49	EVA_GENOME_DK	ss1573853341	Apr 01, 2015 (144)
50	EVA_DECODE	ss1584136243	Apr 01, 2015 (144)
51	EVA_UK10K_ALSPAC	ss1599390047	Apr 01, 2015 (144)
52	EVA_UK10K_TWINSUK	ss1642384080	Apr 01, 2015 (144)
53	EVA_SVP	ss1712305726	Apr 01, 2015 (144)
54	ILLUMINA	ss1751869491	Sep 08, 2015 (146)
55	WEILL_CORNELL_DGM	ss1917969187	Feb 12, 2016 (147)
56	GENOMED	ss1966668256	Jul 19, 2016 (147)
57	JJLAB	ss2019501900	Sep 14, 2016 (149)
58	ILLUMINA	ss2094782218	Dec 20, 2016 (150)
59	ILLUMINA	ss2094948895	Dec 20, 2016 (150)
60	USC_VALOUEV	ss2147489361	Dec 20, 2016 (150)
61	HUMAN_LONGEVITY	ss2159417466	Dec 20, 2016 (150)
62	SYSTEMSBIOZJU	ss2624266660	Nov 08, 2017 (151)
63	ILLUMINA	ss2632466086	Nov 08, 2017 (151)
64	GRF	ss2697380120	Nov 08, 2017 (151)
65	GNOMAD	ss2750726890	Nov 08, 2017 (151)
66	SWEGEN	ss2986162311	Nov 08, 2017 (151)
67	BIOINF_KMB_FNS_UNIBA	ss3023514987	Nov 08, 2017 (151)
68	CSHL	ss3343276803	Nov 08, 2017 (151)
69	ILLUMINA	ss3626007929	Oct 11, 2018 (152)
70	ILLUMINA	ss3630506024	Oct 11, 2018 (152)
71	ILLUMINA	ss3632878125	Oct 11, 2018 (152)
72	ILLUMINA	ss3633571593	Oct 11, 2018 (152)
73	ILLUMINA	ss3634302476	Oct 11, 2018 (152)
74	ILLUMINA	ss3635265789	Oct 11, 2018 (152)
75	ILLUMINA	ss3635978912	Oct 11, 2018 (152)
76	ILLUMINA	ss3637016133	Oct 11, 2018 (152)
77	ILLUMINA	ss3637732742	Oct 11, 2018 (152)
78	ILLUMINA	ss3638887902	Oct 11, 2018 (152)
79	ILLUMINA	ss3639440664	Oct 11, 2018 (152)
80	ILLUMINA	ss3640009842	Oct 11, 2018 (152)
81	ILLUMINA	ss3642747006	Oct 11, 2018 (152)
82	URBANLAB	ss3646582513	Oct 11, 2018 (152)
83	ILLUMINA	ss3651366817	Oct 11, 2018 (152)
84	EGCUT_WGS	ss3654271713	Jul 12, 2019 (153)
85	EVA_DECODE	ss3686007480	Jul 12, 2019 (153)
86	ACPOP	ss3726722700	Jul 12, 2019 (153)
87	ILLUMINA	ss3744603406	Jul 12, 2019 (153)
88	EVA	ss3745729633	Jul 12, 2019 (153)
89	ILLUMINA	ss3772105153	Jul 12, 2019 (153)
90	KHV_HUMAN_GENOMES	ss3798752631	Jul 12, 2019 (153)
91	EVA	ss3825550050	Apr 25, 2020 (154)
92	EVA	ss3825984712	Apr 25, 2020 (154)
93	EVA	ss3836379580	Apr 25, 2020 (154)
94	EVA	ss3841783624	Apr 25, 2020 (154)
95	HGDP	ss3847322155	Apr 25, 2020 (154)
96	SGDP_PRJ	ss3848016441	Apr 25, 2020 (154)
97	KRGDB	ss3892860744	Apr 25, 2020 (154)
98	EVA	ss3984774171	Apr 25, 2021 (155)
99	EVA	ss4016889286	Apr 25, 2021 (155)
100	TOPMED	ss4436670385	Apr 25, 2021 (155)
101	TOMMO_GENOMICS	ss5142090885	Apr 25, 2021 (155)
102	1000G_HIGH_COVERAGE	ss5240891149	Oct 12, 2022 (156)
103	EVA	ss5314586246	Oct 12, 2022 (156)
104	EVA	ss5316229098	Oct 12, 2022 (156)
105	HUGCELL_USP	ss5442134028	Oct 12, 2022 (156)
106	1000G_HIGH_COVERAGE	ss5512526817	Oct 12, 2022 (156)
107	SANFORD_IMAGENETICS	ss5624764753	Oct 12, 2022 (156)
108	TOMMO_GENOMICS	ss5666244464	Oct 12, 2022 (156)
109	EVA	ss5799472642	Oct 12, 2022 (156)
110	YY_MCH	ss5800250419	Oct 12, 2022 (156)
111	EVA	ss5831429823	Oct 12, 2022 (156)
112	EVA	ss5848751210	Oct 12, 2022 (156)
113	EVA	ss5906732572	Oct 12, 2022 (156)
114	EVA	ss5936595823	Oct 12, 2022 (156)
115	1000Genomes	NC_000001.10 - 1497824	Oct 11, 2018 (152)
116	1000Genomes_30x	NC_000001.11 - 1562444	Oct 12, 2022 (156)
117	The Avon Longitudinal Study of Parents and Children	NC_000001.10 - 1497824	Oct 11, 2018 (152)
118	Genetic variation in the Estonian population	NC_000001.10 - 1497824	Oct 11, 2018 (152)
119	The Danish reference pan genome	NC_000001.10 - 1497824	Apr 25, 2020 (154)
120	gnomAD - Genomes Submission ignored due to conflicting rows: Row 272560 (NC_000001.11:1562443:C:A 1/140108) Row 272561 (NC_000001.11:1562443:C:T 13844/140094)	-	Apr 25, 2021 (155)
121	gnomAD - Genomes Submission ignored due to conflicting rows: Row 272560 (NC_000001.11:1562443:C:A 1/140108) Row 272561 (NC_000001.11:1562443:C:T 13844/140094)	-	Apr 25, 2021 (155)
122	Genome of the Netherlands Release 5	NC_000001.10 - 1497824	Apr 25, 2020 (154)
123	HGDP-CEPH-db Supplement 1	NC_000001.9 - 1487687	Apr 25, 2020 (154)
124	HapMap	NC_000001.11 - 1562444	Apr 25, 2020 (154)
125	KOREAN population from KRGDB	NC_000001.10 - 1497824	Apr 25, 2020 (154)
126	Northern Sweden	NC_000001.10 - 1497824	Jul 12, 2019 (153)
127	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000001.10 - 1497824	Apr 25, 2021 (155)
128	Qatari	NC_000001.10 - 1497824	Apr 25, 2020 (154)
129	SGDP_PRJ	NC_000001.10 - 1497824	Apr 25, 2020 (154)
130	Siberian	NC_000001.10 - 1497824	Apr 25, 2020 (154)
131	8.3KJPN	NC_000001.10 - 1497824	Apr 25, 2021 (155)
132	14KJPN	NC_000001.11 - 1562444	Oct 12, 2022 (156)
133	TopMed	NC_000001.11 - 1562444	Apr 25, 2021 (155)
134	UK 10K study - Twins	NC_000001.10 - 1497824	Oct 11, 2018 (152)
135	A Vietnamese Genetic Variation Database	NC_000001.10 - 1497824	Jul 12, 2019 (153)
136	ALFA	NC_000001.11 - 1562444	Apr 25, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs57218417	May 23, 2008 (130)
rs386564125	Aug 21, 2014 (142)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
4168649727	NC_000001.11:1562443:C:A	NC_000001.11:1562443:C:A	(self)
ss3638887902, ss3639440664	NC_000001.8:1583090:C:T	NC_000001.11:1562443:C:T	(self)
47, ss87159994, ss107938697, ss275683687, ss283988470, ss290494859, ss480518355, ss825458440, ss1584136243, ss1712305726, ss3642747006, ss3847322155	NC_000001.9:1487686:C:T	NC_000001.11:1562443:C:T	(self)
35017, 13139, 9961, 1360575, 5493, 38138, 7565, 98, 11117, 33421, 5715, 60192, 13139, 2692, ss230397285, ss238116665, ss480532648, ss481343359, ss485056536, ss537073223, ss647521247, ss778491036, ss782974479, ss783935762, ss832230856, ss832890880, ss833481710, ss833947040, ss974776295, ss1067615767, ss1289369312, ss1573853341, ss1599390047, ss1642384080, ss1751869491, ss1917969187, ss1966668256, ss2019501900, ss2094782218, ss2094948895, ss2147489361, ss2624266660, ss2632466086, ss2697380120, ss2750726890, ss2986162311, ss3343276803, ss3626007929, ss3630506024, ss3632878125, ss3633571593, ss3634302476, ss3635265789, ss3635978912, ss3637016133, ss3637732742, ss3640009842, ss3651366817, ss3654271713, ss3726722700, ss3744603406, ss3745729633, ss3772105153, ss3825550050, ss3825984712, ss3836379580, ss3848016441, ss3892860744, ss3984774171, ss4016889286, ss5142090885, ss5314586246, ss5316229098, ss5624764753, ss5799472642, ss5831429823, ss5936595823	NC_000001.10:1497823:C:T	NC_000001.11:1562443:C:T	(self)
52752, 531, 81568, 276720, 4168649727, ss2159417466, ss3023514987, ss3646582513, ss3686007480, ss3798752631, ss3841783624, ss4436670385, ss5240891149, ss5442134028, ss5512526817, ss5666244464, ss5800250419, ss5848751210, ss5906732572	NC_000001.11:1562443:C:T	NC_000001.11:1562443:C:T	(self)
ss3240917, ss23837270, ss44050134, ss66836619, ss67244004, ss67640916, ss68381024, ss70722342, ss71290834, ss75871353, ss79127922, ss84026954, ss99179961, ss102713802, ss121993446, ss137755166, ss139217176, ss153901275, ss159379086, ss160532221, ss171175815, ss173268107	NT_004350.19:976455:C:T	NC_000001.11:1562443:C:T	(self)
ss9870514	NT_077914.1:173446:C:T	NC_000001.11:1562443:C:T	(self)
ss20569979	NT_077914.2:173295:C:T	NC_000001.11:1562443:C:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs2296716

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs2296716