Name: rs3763013
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs3763013

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr5:151018400 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: C>A / C>G / C>T
Variation Type: SNV Single Nucleotide Variation
Frequency: C=0.468986 (124136/264690, TOPMED)
C=0.465818 (65180/139926, GnomAD)
T=0.46555 (36640/78702, PAGE_STUDY) (+ 20 more)
C=0.39503 (12456/31532, ALFA)
C=0.37193 (10510/28258, 14KJPN)
C=0.36975 (6197/16760, 8.3KJPN)
C=0.4903 (3140/6404, 1000G_30x)
C=0.4870 (2439/5008, 1000G)
C=0.3402 (1524/4480, Estonian)
C=0.3373 (1300/3854, ALSPAC)
C=0.3193 (1184/3708, TWINSUK)
C=0.3017 (884/2930, KOREAN)
C=0.4098 (854/2084, HGDP_Stanford)
C=0.2964 (543/1832, Korea1K)
C=0.327 (326/998, GoNL)
C=0.290 (174/600, NorthernSweden)
C=0.243 (103/424, SGDP_PRJ)
T=0.412 (89/216, Qatari)
C=0.231 (49/212, Vietnamese)
C=0.39 (26/66, Ancient Sardinia)
C=0.23 (12/52, Siberian)
C=0.50 (20/40, GENOME_DK)
T=0.50 (20/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: None
Publications: 4 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	31532	C=0.39503	T=0.60497
European	Sub	24820	C=0.34347	T=0.65653
African	Sub	3602	C=0.7707	T=0.2293
African Others	Sub	124	C=0.919	T=0.081
African American	Sub	3478	C=0.7654	T=0.2346
Asian	Sub	162	C=0.247	T=0.753
East Asian	Sub	134	C=0.239	T=0.761
Other Asian	Sub	28	C=0.29	T=0.71
Latin American 1	Sub	168	C=0.476	T=0.524
Latin American 2	Sub	700	C=0.230	T=0.770
South Asian	Sub	120	C=0.567	T=0.433
Other	Sub	1960	C=0.4112	T=0.5888

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	C=0.468986	T=0.531014
gnomAD - Genomes	Global	Study-wide	139926	C=0.465818	T=0.534182
gnomAD - Genomes	European	Sub	75806	C=0.33715	T=0.66285
gnomAD - Genomes	African	Sub	41892	C=0.76642	T=0.23358
gnomAD - Genomes	American	Sub	13630	C=0.32927	T=0.67073
gnomAD - Genomes	Ashkenazi Jewish	Sub	3322	C=0.3715	T=0.6285
gnomAD - Genomes	East Asian	Sub	3126	C=0.2674	T=0.7326
gnomAD - Genomes	Other	Sub	2150	C=0.4451	T=0.5549
The PAGE Study	Global	Study-wide	78702	C=0.53445	T=0.46555
The PAGE Study	AfricanAmerican	Sub	32516	C=0.75517	T=0.24483
The PAGE Study	Mexican	Sub	10810	C=0.23275	T=0.76725
The PAGE Study	Asian	Sub	8318	C=0.3675	T=0.6325
The PAGE Study	PuertoRican	Sub	7918	C=0.4717	T=0.5283
The PAGE Study	NativeHawaiian	Sub	4534	C=0.4784	T=0.5216
The PAGE Study	Cuban	Sub	4230	C=0.4222	T=0.5778
The PAGE Study	Dominican	Sub	3828	C=0.5721	T=0.4279
The PAGE Study	CentralAmerican	Sub	2450	C=0.2967	T=0.7033
The PAGE Study	SouthAmerican	Sub	1982	C=0.2553	T=0.7447
The PAGE Study	NativeAmerican	Sub	1260	C=0.3659	T=0.6341
The PAGE Study	SouthAsian	Sub	856	C=0.421	T=0.579
Allele Frequency Aggregator	Total	Global	31532	C=0.39503	T=0.60497
Allele Frequency Aggregator	European	Sub	24820	C=0.34347	T=0.65653
Allele Frequency Aggregator	African	Sub	3602	C=0.7707	T=0.2293
Allele Frequency Aggregator	Other	Sub	1960	C=0.4112	T=0.5888
Allele Frequency Aggregator	Latin American 2	Sub	700	C=0.230	T=0.770
Allele Frequency Aggregator	Latin American 1	Sub	168	C=0.476	T=0.524
Allele Frequency Aggregator	Asian	Sub	162	C=0.247	T=0.753
Allele Frequency Aggregator	South Asian	Sub	120	C=0.567	T=0.433
14KJPN	JAPANESE	Study-wide	28258	C=0.37193	T=0.62807
8.3KJPN	JAPANESE	Study-wide	16760	C=0.36975	T=0.63025
1000Genomes_30x	Global	Study-wide	6404	C=0.4903	T=0.5097
1000Genomes_30x	African	Sub	1786	C=0.8768	T=0.1232
1000Genomes_30x	Europe	Sub	1266	C=0.3420	T=0.6580
1000Genomes_30x	South Asian	Sub	1202	C=0.4368	T=0.5632
1000Genomes_30x	East Asian	Sub	1170	C=0.2650	T=0.7350
1000Genomes_30x	American	Sub	980	C=0.312	T=0.688
1000Genomes	Global	Study-wide	5008	C=0.4870	T=0.5130
1000Genomes	African	Sub	1322	C=0.8722	T=0.1278
1000Genomes	East Asian	Sub	1008	C=0.2778	T=0.7222
1000Genomes	Europe	Sub	1006	C=0.3608	T=0.6392
1000Genomes	South Asian	Sub	978	C=0.436	T=0.564
1000Genomes	American	Sub	694	C=0.313	T=0.687
Genetic variation in the Estonian population	Estonian	Study-wide	4480	C=0.3402	T=0.6598
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	C=0.3373	T=0.6627
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	C=0.3193	T=0.6807
KOREAN population from KRGDB	KOREAN	Study-wide	2930	C=0.3017	A=0.0000, G=0.0000, T=0.6983
HGDP-CEPH-db Supplement 1	Global	Study-wide	2084	C=0.4098	T=0.5902
HGDP-CEPH-db Supplement 1	Est_Asia	Sub	470	C=0.304	T=0.696
HGDP-CEPH-db Supplement 1	Central_South_Asia	Sub	414	C=0.437	T=0.563
HGDP-CEPH-db Supplement 1	Middle_Est	Sub	350	C=0.514	T=0.486
HGDP-CEPH-db Supplement 1	Europe	Sub	320	C=0.319	T=0.681
HGDP-CEPH-db Supplement 1	Africa	Sub	242	C=0.893	T=0.107
HGDP-CEPH-db Supplement 1	America	Sub	216	C=0.028	T=0.972
HGDP-CEPH-db Supplement 1	Oceania	Sub	72	C=0.36	T=0.64
Korean Genome Project	KOREAN	Study-wide	1832	C=0.2964	T=0.7036
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	C=0.327	T=0.673
Northern Sweden	ACPOP	Study-wide	600	C=0.290	T=0.710
SGDP_PRJ	Global	Study-wide	424	C=0.243	T=0.757
Qatari	Global	Study-wide	216	C=0.588	T=0.412
A Vietnamese Genetic Variation Database	Global	Study-wide	212	C=0.231	T=0.769
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	66	C=0.39	T=0.61
Siberian	Global	Study-wide	52	C=0.23	T=0.77
The Danish reference pan genome	Danish	Study-wide	40	C=0.50	T=0.50

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 5	NC_000005.10:g.151018400C>A
GRCh38.p14 chr 5	NC_000005.10:g.151018400C>G
GRCh38.p14 chr 5	NC_000005.10:g.151018400C>T
GRCh37.p13 chr 5	NC_000005.9:g.150397961C>A
GRCh37.p13 chr 5	NC_000005.9:g.150397961C>G
GRCh37.p13 chr 5	NC_000005.9:g.150397961C>T

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	C=	A	G	T
GRCh38.p14 chr 5	NC_000005.10:g.151018400=	NC_000005.10:g.151018400C>A	NC_000005.10:g.151018400C>G	NC_000005.10:g.151018400C>T
GRCh37.p13 chr 5	NC_000005.9:g.150397961=	NC_000005.9:g.150397961C>A	NC_000005.9:g.150397961C>G	NC_000005.9:g.150397961C>T

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

103 SubSNP, 22 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	YUSUKE	ss4949048	Aug 28, 2002 (107)
2	SSAHASNP	ss22351998	Apr 05, 2004 (121)
3	STEJUSTINE-REGGEN	ss51853766	Mar 16, 2006 (126)
4	ILLUMINA	ss66585272	Nov 29, 2006 (127)
5	ILLUMINA	ss67300656	Nov 29, 2006 (127)
6	ILLUMINA	ss67705403	Nov 29, 2006 (127)
7	PERLEGEN	ss68953755	May 16, 2007 (127)
8	ILLUMINA	ss70779290	May 26, 2008 (131)
9	ILLUMINA	ss79165585	Dec 15, 2007 (131)
10	HGSV	ss81675882	Dec 15, 2007 (131)
11	KRIBB_YJKIM	ss84174038	Dec 15, 2007 (131)
12	BCMHGSC_JDW	ss93289962	Mar 24, 2008 (131)
13	HUMANGENOME_JCVI	ss98656735	Feb 06, 2009 (131)
14	BGI	ss104251116	Dec 01, 2009 (137)
15	SNP500CANCER	ss105437740	Feb 06, 2009 (131)
16	ILLUMINA	ss107695060	Feb 06, 2009 (131)
17	1000GENOMES	ss109511942	Feb 13, 2009 (137)
18	ILLUMINA	ss122213200	Dec 01, 2009 (137)
19	ENSEMBL	ss143527540	Dec 01, 2009 (137)
20	GMI	ss156173749	Dec 01, 2009 (137)
21	COMPLETE_GENOMICS	ss162767445	Jul 04, 2010 (137)
22	BCM-HGSC-SUB	ss207109809	Jul 04, 2010 (137)
23	1000GENOMES	ss222037448	Jul 14, 2010 (137)
24	1000GENOMES	ss233198295	Jul 14, 2010 (137)
25	1000GENOMES	ss240311446	Jul 15, 2010 (137)
26	GMI	ss278531081	May 04, 2012 (137)
27	GMI	ss285282766	Apr 25, 2013 (138)
28	PJP	ss293493197	May 09, 2011 (137)
29	ILLUMINA	ss479401586	May 04, 2012 (137)
30	ILLUMINA	ss484961305	May 04, 2012 (137)
31	ILLUMINA	ss532957088	Sep 08, 2015 (146)
32	TISHKOFF	ss558795487	Apr 25, 2013 (138)
33	SSMP	ss652699652	Apr 25, 2013 (138)
34	ILLUMINA	ss779579869	Sep 08, 2015 (146)
35	ILLUMINA	ss780972369	Sep 08, 2015 (146)
36	ILLUMINA	ss825496103	Aug 21, 2014 (147)
37	ILLUMINA	ss835051403	Sep 08, 2015 (146)
38	EVA-GONL	ss982260323	Aug 21, 2014 (142)
39	JMKIDD_LAB	ss1073142149	Aug 21, 2014 (142)
40	1000GENOMES	ss1317755387	Aug 21, 2014 (142)
41	DDI	ss1430539719	Apr 01, 2015 (144)
42	EVA_GENOME_DK	ss1581402227	Apr 01, 2015 (144)
43	EVA_DECODE	ss1591793620	Apr 01, 2015 (144)
44	EVA_UK10K_ALSPAC	ss1614301822	Apr 01, 2015 (144)
45	EVA_UK10K_TWINSUK	ss1657295855	Apr 01, 2015 (144)
46	EVA_SVP	ss1712810486	Apr 01, 2015 (144)
47	WEILL_CORNELL_DGM	ss1925514376	Feb 12, 2016 (147)
48	ILLUMINA	ss1958834856	Feb 12, 2016 (147)
49	GENOMED	ss1970237942	Jul 19, 2016 (147)
50	JJLAB	ss2023365295	Sep 14, 2016 (149)
51	USC_VALOUEV	ss2151523881	Dec 20, 2016 (150)
52	HUMAN_LONGEVITY	ss2279285114	Dec 20, 2016 (150)
53	SYSTEMSBIOZJU	ss2626171215	Nov 08, 2017 (151)
54	ILLUMINA	ss2634356987	Nov 08, 2017 (151)
55	GRF	ss2707093952	Nov 08, 2017 (151)
56	GNOMAD	ss2832320042	Nov 08, 2017 (151)
57	SWEGEN	ss2998006956	Nov 08, 2017 (151)
58	ILLUMINA	ss3022543113	Nov 08, 2017 (151)
59	BIOINF_KMB_FNS_UNIBA	ss3025464123	Nov 08, 2017 (151)
60	CSHL	ss3346685403	Nov 08, 2017 (151)
61	ILLUMINA	ss3629372170	Oct 12, 2018 (152)
62	ILLUMINA	ss3632279870	Oct 12, 2018 (152)
63	ILLUMINA	ss3639296600	Oct 12, 2018 (152)
64	ILLUMINA	ss3639672644	Oct 12, 2018 (152)
65	ILLUMINA	ss3642452751	Oct 12, 2018 (152)
66	URBANLAB	ss3648197438	Oct 12, 2018 (152)
67	ILLUMINA	ss3653047236	Oct 12, 2018 (152)
68	EGCUT_WGS	ss3665928158	Jul 13, 2019 (153)
69	EVA_DECODE	ss3715961665	Jul 13, 2019 (153)
70	ILLUMINA	ss3726282621	Jul 13, 2019 (153)
71	ACPOP	ss3732929305	Jul 13, 2019 (153)
72	EVA	ss3764227021	Jul 13, 2019 (153)
73	PAGE_CC	ss3771240641	Jul 13, 2019 (153)
74	PACBIO	ss3785284291	Jul 13, 2019 (153)
75	PACBIO	ss3790661597	Jul 13, 2019 (153)
76	PACBIO	ss3795538645	Jul 13, 2019 (153)
77	KHV_HUMAN_GENOMES	ss3807395391	Jul 13, 2019 (153)
78	EVA	ss3829569155	Apr 26, 2020 (154)
79	EVA	ss3838257833	Apr 26, 2020 (154)
80	EVA	ss3843700944	Apr 26, 2020 (154)
81	HGDP	ss3847811348	Apr 26, 2020 (154)
82	SGDP_PRJ	ss3863251924	Apr 26, 2020 (154)
83	KRGDB	ss3909929964	Apr 26, 2020 (154)
84	KOGIC	ss3957902547	Apr 26, 2020 (154)
85	EVA	ss3985178554	Apr 26, 2021 (155)
86	TOPMED	ss4683423377	Apr 26, 2021 (155)
87	TOMMO_GENOMICS	ss5174752448	Apr 26, 2021 (155)
88	1000G_HIGH_COVERAGE	ss5266314070	Oct 13, 2022 (156)
89	EVA	ss5315095689	Oct 13, 2022 (156)
90	EVA	ss5361828713	Oct 13, 2022 (156)
91	HUGCELL_USP	ss5464231476	Oct 13, 2022 (156)
92	1000G_HIGH_COVERAGE	ss5551204630	Oct 13, 2022 (156)
93	SANFORD_IMAGENETICS	ss5624605189	Oct 13, 2022 (156)
94	SANFORD_IMAGENETICS	ss5639147661	Oct 13, 2022 (156)
95	TOMMO_GENOMICS	ss5712008793	Oct 13, 2022 (156)
96	YY_MCH	ss5806879245	Oct 13, 2022 (156)
97	EVA	ss5835823215	Oct 13, 2022 (156)
98	EVA	ss5847276960	Oct 13, 2022 (156)
99	EVA	ss5848069960	Oct 13, 2022 (156)
100	EVA	ss5855071165	Oct 13, 2022 (156)
101	EVA	ss5896870090	Oct 13, 2022 (156)
102	EVA	ss5967628532	Oct 13, 2022 (156)
103	EVA	ss5979758932	Oct 13, 2022 (156)
104	1000Genomes	NC_000005.9 - 150397961	Oct 12, 2018 (152)
105	1000Genomes_30x	NC_000005.10 - 151018400	Oct 13, 2022 (156)
106	The Avon Longitudinal Study of Parents and Children	NC_000005.9 - 150397961	Oct 12, 2018 (152)
107	Genetic variation in the Estonian population	NC_000005.9 - 150397961	Oct 12, 2018 (152)
108	The Danish reference pan genome	NC_000005.9 - 150397961	Apr 26, 2020 (154)
109	gnomAD - Genomes	NC_000005.10 - 151018400	Apr 26, 2021 (155)
110	Genome of the Netherlands Release 5	NC_000005.9 - 150397961	Apr 26, 2020 (154)
111	HGDP-CEPH-db Supplement 1	NC_000005.8 - 150378154	Apr 26, 2020 (154)
112	KOREAN population from KRGDB	NC_000005.9 - 150397961	Apr 26, 2020 (154)
113	Korean Genome Project	NC_000005.10 - 151018400	Apr 26, 2020 (154)
114	Northern Sweden	NC_000005.9 - 150397961	Jul 13, 2019 (153)
115	The PAGE Study	NC_000005.10 - 151018400	Jul 13, 2019 (153)
116	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000005.9 - 150397961	Apr 26, 2021 (155)
117	Qatari	NC_000005.9 - 150397961	Apr 26, 2020 (154)
118	SGDP_PRJ	NC_000005.9 - 150397961	Apr 26, 2020 (154)
119	Siberian	NC_000005.9 - 150397961	Apr 26, 2020 (154)
120	8.3KJPN	NC_000005.9 - 150397961	Apr 26, 2021 (155)
121	14KJPN	NC_000005.10 - 151018400	Oct 13, 2022 (156)
122	TopMed	NC_000005.10 - 151018400	Apr 26, 2021 (155)
123	UK 10K study - Twins	NC_000005.9 - 150397961	Oct 12, 2018 (152)
124	A Vietnamese Genetic Variation Database	NC_000005.9 - 150397961	Jul 13, 2019 (153)
125	ALFA	NC_000005.10 - 151018400	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs36207271	Oct 25, 2006 (127)
rs60956029	Dec 02, 2009 (131)
rs77784982	Jan 15, 2013 (137)
rs117252261	Aug 16, 2010 (132)
rs572475071	Jul 19, 2016 (147)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
17107358, ss3909929964	NC_000005.9:150397960:C:A	NC_000005.10:151018399:C:A	(self)
ss107695060, ss122213200	NT_029289.11:11560887:C:A	NC_000005.10:151018399:C:A	(self)
17107358, ss3909929964	NC_000005.9:150397960:C:G	NC_000005.10:151018399:C:G	(self)
ss107695060, ss122213200	NT_029289.11:11560887:C:G	NC_000005.10:151018399:C:G	(self)
489240, ss81675882, ss93289962, ss109511942, ss162767445, ss207109809, ss278531081, ss285282766, ss293493197, ss484961305, ss825496103, ss1591793620, ss1712810486, ss3639296600, ss3639672644, ss3847811348	NC_000005.8:150378153:C:T	NC_000005.10:151018399:C:T	(self)
29453112, 16388645, 11666406, 7567166, 7275709, 17107358, 6214170, 404481, 7556306, 15268904, 4040235, 32721755, 16388645, 3631929, ss222037448, ss233198295, ss240311446, ss479401586, ss532957088, ss558795487, ss652699652, ss779579869, ss780972369, ss835051403, ss982260323, ss1073142149, ss1317755387, ss1430539719, ss1581402227, ss1614301822, ss1657295855, ss1925514376, ss1958834856, ss1970237942, ss2023365295, ss2151523881, ss2626171215, ss2634356987, ss2707093952, ss2832320042, ss2998006956, ss3022543113, ss3346685403, ss3629372170, ss3632279870, ss3642452751, ss3653047236, ss3665928158, ss3732929305, ss3764227021, ss3785284291, ss3790661597, ss3795538645, ss3829569155, ss3838257833, ss3863251924, ss3909929964, ss3985178554, ss5174752448, ss5315095689, ss5361828713, ss5624605189, ss5639147661, ss5835823215, ss5847276960, ss5848069960, ss5967628532, ss5979758932	NC_000005.9:150397960:C:T	NC_000005.10:151018399:C:T	(self)
38730565, 208324073, 14280548, 462110, 45845897, 520800934, 6505336223, ss2279285114, ss3025464123, ss3648197438, ss3715961665, ss3726282621, ss3771240641, ss3807395391, ss3843700944, ss3957902547, ss4683423377, ss5266314070, ss5464231476, ss5551204630, ss5712008793, ss5806879245, ss5855071165, ss5896870090	NC_000005.10:151018399:C:T	NC_000005.10:151018399:C:T	(self)
ss22351998	NT_029289.10:11560896:C:T	NC_000005.10:151018399:C:T	(self)
ss4949048, ss51853766, ss66585272, ss67300656, ss67705403, ss68953755, ss70779290, ss79165585, ss84174038, ss98656735, ss104251116, ss105437740, ss143527540, ss156173749	NT_029289.11:11560887:C:T	NC_000005.10:151018399:C:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

4 citations for rs3763013

PMID	Title	Author	Year	Journal
19375609	Glutathione peroxidase 3 gene polymorphisms and risk of differentiated thyroid cancer.	Lin JC et al.	2009	Surgery
20576521	Functional glutathione peroxidase 3 polymorphisms associated with increased risk of Taiwanese patients with gastric cancer.	Wang JY et al.	2010	Clinica chimica acta; international journal of clinical chemistry
22259188	Genetic variation in GPX1 is associated with GPX1 activity in a comprehensive analysis of genetic variations in selenoenzyme genes and their activity and oxidative stress in humans.	Takata Y et al.	2012	The Journal of nutrition
22715394	Selenium, selenoenzymes, oxidative stress and risk of neoplastic progression from Barrett's esophagus: results from biomarkers and genetic variants.	Takata Y et al.	2012	PloS one

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs3763013