Name: rs536045
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs536045

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr19:52621950 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: G>A / G>C / G>T
Variation Type: SNV Single Nucleotide Variation
Frequency: G=0.200937 (53186/264690, TOPMED)
G=0.200017 (27790/138938, GnomAD)
G=0.26941 (7605/28228, 14KJPN) (+ 15 more)
G=0.23298 (4401/18890, ALFA)
G=0.26647 (4466/16760, 8.3KJPN)
G=0.2196 (1406/6404, 1000G_30x)
G=0.2224 (1114/5008, 1000G)
G=0.2594 (1162/4480, Estonian)
G=0.2727 (1051/3854, ALSPAC)
G=0.2597 (963/3708, TWINSUK)
G=0.2246 (658/2930, KOREAN)
G=0.2325 (426/1832, Korea1K)
G=0.290 (289/998, GoNL)
G=0.258 (155/600, NorthernSweden)
G=0.181 (95/526, SGDP_PRJ)
G=0.171 (37/216, Qatari)
G=0.15 (7/46, Siberian)
G=0.20 (8/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: ZNF83 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	18890	G=0.23298	C=0.76702
European	Sub	14286	G=0.26011	C=0.73989
African	Sub	2946	G=0.1093	C=0.8907
African Others	Sub	114	G=0.061	C=0.939
African American	Sub	2832	G=0.1112	C=0.8888
Asian	Sub	112	G=0.312	C=0.688
East Asian	Sub	86	G=0.29	C=0.71
Other Asian	Sub	26	G=0.38	C=0.62
Latin American 1	Sub	146	G=0.260	C=0.740
Latin American 2	Sub	610	G=0.177	C=0.823
South Asian	Sub	98	G=0.44	C=0.56
Other	Sub	692	G=0.201	C=0.799

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	G=0.200937	C=0.799063
gnomAD - Genomes	Global	Study-wide	138938	G=0.200017	C=0.799983
gnomAD - Genomes	European	Sub	75152	G=0.25528	C=0.74472
gnomAD - Genomes	African	Sub	41768	G=0.10824	C=0.89176
gnomAD - Genomes	American	Sub	13532	G=0.15001	C=0.84999
gnomAD - Genomes	Ashkenazi Jewish	Sub	3282	G=0.2687	C=0.7313
gnomAD - Genomes	East Asian	Sub	3068	G=0.2516	C=0.7484
gnomAD - Genomes	Other	Sub	2136	G=0.1873	C=0.8127
14KJPN	JAPANESE	Study-wide	28228	G=0.26941	C=0.73059
Allele Frequency Aggregator	Total	Global	18890	G=0.23298	C=0.76702
Allele Frequency Aggregator	European	Sub	14286	G=0.26011	C=0.73989
Allele Frequency Aggregator	African	Sub	2946	G=0.1093	C=0.8907
Allele Frequency Aggregator	Other	Sub	692	G=0.201	C=0.799
Allele Frequency Aggregator	Latin American 2	Sub	610	G=0.177	C=0.823
Allele Frequency Aggregator	Latin American 1	Sub	146	G=0.260	C=0.740
Allele Frequency Aggregator	Asian	Sub	112	G=0.312	C=0.688
Allele Frequency Aggregator	South Asian	Sub	98	G=0.44	C=0.56
8.3KJPN	JAPANESE	Study-wide	16760	G=0.26647	C=0.73353
1000Genomes_30x	Global	Study-wide	6404	G=0.2196	C=0.7804
1000Genomes_30x	African	Sub	1786	G=0.0907	C=0.9093
1000Genomes_30x	Europe	Sub	1266	G=0.2306	C=0.7694
1000Genomes_30x	South Asian	Sub	1202	G=0.4018	C=0.5982
1000Genomes_30x	East Asian	Sub	1170	G=0.2658	C=0.7342
1000Genomes_30x	American	Sub	980	G=0.161	C=0.839
1000Genomes	Global	Study-wide	5008	G=0.2224	C=0.7776
1000Genomes	African	Sub	1322	G=0.0885	C=0.9115
1000Genomes	East Asian	Sub	1008	G=0.2659	C=0.7341
1000Genomes	Europe	Sub	1006	G=0.2266	C=0.7734
1000Genomes	South Asian	Sub	978	G=0.398	C=0.602
1000Genomes	American	Sub	694	G=0.161	C=0.839
Genetic variation in the Estonian population	Estonian	Study-wide	4480	G=0.2594	C=0.7406
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.2727	C=0.7273
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.2597	C=0.7403
KOREAN population from KRGDB	KOREAN	Study-wide	2930	G=0.2246	A=0.0000, C=0.7754, T=0.0000
Korean Genome Project	KOREAN	Study-wide	1832	G=0.2325	C=0.7675
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	G=0.290	C=0.710
Northern Sweden	ACPOP	Study-wide	600	G=0.258	C=0.742
SGDP_PRJ	Global	Study-wide	526	G=0.181	C=0.819
Qatari	Global	Study-wide	216	G=0.171	C=0.829
Siberian	Global	Study-wide	46	G=0.15	C=0.85
The Danish reference pan genome	Danish	Study-wide	40	G=0.20	C=0.80

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 19	NC_000019.10:g.52621950G>A
GRCh38.p14 chr 19	NC_000019.10:g.52621950G>C
GRCh38.p14 chr 19	NC_000019.10:g.52621950G>T
GRCh37.p13 chr 19	NC_000019.9:g.53125203G>A
GRCh37.p13 chr 19	NC_000019.9:g.53125203G>C
GRCh37.p13 chr 19	NC_000019.9:g.53125203G>T
ZNF83 RefSeqGene	NG_052996.1:g.73632C>T
ZNF83 RefSeqGene	NG_052996.1:g.73632C>G
ZNF83 RefSeqGene	NG_052996.1:g.73632C>A

Gene: ZNF83, zinc finger protein 83 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
ZNF83 transcript variant 1	NM_001105549.2:c.-574-288… NM_001105549.2:c.-574-2888C>T	N/A	Intron Variant
ZNF83 transcript variant 3	NM_001105550.2:c.-458-288… NM_001105550.2:c.-458-2888C>T	N/A	Intron Variant
ZNF83 transcript variant 2	NM_001105551.2:c.-484-288… NM_001105551.2:c.-484-2888C>T	N/A	Intron Variant
ZNF83 transcript variant 4	NM_001105552.2:c.-360-288… NM_001105552.2:c.-360-2888C>T	N/A	Intron Variant
ZNF83 transcript variant 10	NM_001277945.2:c.-360-288… NM_001277945.2:c.-360-2888C>T	N/A	Intron Variant
ZNF83 transcript variant 11	NM_001277946.2:c.-233-715… NM_001277946.2:c.-233-7153C>T	N/A	Intron Variant
ZNF83 transcript variant 12	NM_001277947.2:c.-233-715… NM_001277947.2:c.-233-7153C>T	N/A	Intron Variant
ZNF83 transcript variant 13	NM_001277948.2:c.-360-288… NM_001277948.2:c.-360-2888C>T	N/A	Intron Variant
ZNF83 transcript variant 14	NM_001277949.2:c.-360-288… NM_001277949.2:c.-360-2888C>T	N/A	Intron Variant
ZNF83 transcript variant 15	NM_001277951.2:c.-233-715… NM_001277951.2:c.-233-7153C>T	N/A	Intron Variant
ZNF83 transcript variant 16	NM_001277952.2:c.-478-288… NM_001277952.2:c.-478-2888C>T	N/A	Intron Variant
ZNF83 transcript variant 17	NM_001348015.2:c.-484-288… NM_001348015.2:c.-484-2888C>T	N/A	Intron Variant
ZNF83 transcript variant 18	NM_001348016.2:c.-360-288… NM_001348016.2:c.-360-2888C>T	N/A	Intron Variant
ZNF83 transcript variant 19	NM_001348017.2:c.-360-288… NM_001348017.2:c.-360-2888C>T	N/A	Intron Variant
ZNF83 transcript variant 20	NM_001348018.2:c.-233-715… NM_001348018.2:c.-233-7153C>T	N/A	Intron Variant
ZNF83 transcript variant 21	NM_001348019.2:c.-360-288… NM_001348019.2:c.-360-2888C>T	N/A	Intron Variant
ZNF83 transcript variant 5	NM_018300.4:c.-233-7153C>T	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	G=	A	C	T
GRCh38.p14 chr 19	NC_000019.10:g.52621950=	NC_000019.10:g.52621950G>A	NC_000019.10:g.52621950G>C	NC_000019.10:g.52621950G>T
GRCh37.p13 chr 19	NC_000019.9:g.53125203=	NC_000019.9:g.53125203G>A	NC_000019.9:g.53125203G>C	NC_000019.9:g.53125203G>T
ZNF83 RefSeqGene	NG_052996.1:g.73632=	NG_052996.1:g.73632C>T	NG_052996.1:g.73632C>G	NG_052996.1:g.73632C>A
ZNF83 transcript variant 1	NM_001105549.1:c.-574-2888=	NM_001105549.1:c.-574-2888C>T	NM_001105549.1:c.-574-2888C>G	NM_001105549.1:c.-574-2888C>A
ZNF83 transcript variant 1	NM_001105549.2:c.-574-2888=	NM_001105549.2:c.-574-2888C>T	NM_001105549.2:c.-574-2888C>G	NM_001105549.2:c.-574-2888C>A
ZNF83 transcript variant 3	NM_001105550.1:c.-458-2888=	NM_001105550.1:c.-458-2888C>T	NM_001105550.1:c.-458-2888C>G	NM_001105550.1:c.-458-2888C>A
ZNF83 transcript variant 3	NM_001105550.2:c.-458-2888=	NM_001105550.2:c.-458-2888C>T	NM_001105550.2:c.-458-2888C>G	NM_001105550.2:c.-458-2888C>A
ZNF83 transcript variant 2	NM_001105551.1:c.-484-2888=	NM_001105551.1:c.-484-2888C>T	NM_001105551.1:c.-484-2888C>G	NM_001105551.1:c.-484-2888C>A
ZNF83 transcript variant 2	NM_001105551.2:c.-484-2888=	NM_001105551.2:c.-484-2888C>T	NM_001105551.2:c.-484-2888C>G	NM_001105551.2:c.-484-2888C>A
ZNF83 transcript variant 4	NM_001105552.1:c.-360-2888=	NM_001105552.1:c.-360-2888C>T	NM_001105552.1:c.-360-2888C>G	NM_001105552.1:c.-360-2888C>A
ZNF83 transcript variant 4	NM_001105552.2:c.-360-2888=	NM_001105552.2:c.-360-2888C>T	NM_001105552.2:c.-360-2888C>G	NM_001105552.2:c.-360-2888C>A
ZNF83 transcript variant 10	NM_001277945.1:c.-360-2888=	NM_001277945.1:c.-360-2888C>T	NM_001277945.1:c.-360-2888C>G	NM_001277945.1:c.-360-2888C>A
ZNF83 transcript variant 10	NM_001277945.2:c.-360-2888=	NM_001277945.2:c.-360-2888C>T	NM_001277945.2:c.-360-2888C>G	NM_001277945.2:c.-360-2888C>A
ZNF83 transcript variant 11	NM_001277946.1:c.-233-7153=	NM_001277946.1:c.-233-7153C>T	NM_001277946.1:c.-233-7153C>G	NM_001277946.1:c.-233-7153C>A
ZNF83 transcript variant 11	NM_001277946.2:c.-233-7153=	NM_001277946.2:c.-233-7153C>T	NM_001277946.2:c.-233-7153C>G	NM_001277946.2:c.-233-7153C>A
ZNF83 transcript variant 12	NM_001277947.1:c.-233-7153=	NM_001277947.1:c.-233-7153C>T	NM_001277947.1:c.-233-7153C>G	NM_001277947.1:c.-233-7153C>A
ZNF83 transcript variant 12	NM_001277947.2:c.-233-7153=	NM_001277947.2:c.-233-7153C>T	NM_001277947.2:c.-233-7153C>G	NM_001277947.2:c.-233-7153C>A
ZNF83 transcript variant 13	NM_001277948.1:c.-360-2888=	NM_001277948.1:c.-360-2888C>T	NM_001277948.1:c.-360-2888C>G	NM_001277948.1:c.-360-2888C>A
ZNF83 transcript variant 13	NM_001277948.2:c.-360-2888=	NM_001277948.2:c.-360-2888C>T	NM_001277948.2:c.-360-2888C>G	NM_001277948.2:c.-360-2888C>A
ZNF83 transcript variant 14	NM_001277949.1:c.-360-2888=	NM_001277949.1:c.-360-2888C>T	NM_001277949.1:c.-360-2888C>G	NM_001277949.1:c.-360-2888C>A
ZNF83 transcript variant 14	NM_001277949.2:c.-360-2888=	NM_001277949.2:c.-360-2888C>T	NM_001277949.2:c.-360-2888C>G	NM_001277949.2:c.-360-2888C>A
ZNF83 transcript variant 15	NM_001277951.1:c.-233-7153=	NM_001277951.1:c.-233-7153C>T	NM_001277951.1:c.-233-7153C>G	NM_001277951.1:c.-233-7153C>A
ZNF83 transcript variant 15	NM_001277951.2:c.-233-7153=	NM_001277951.2:c.-233-7153C>T	NM_001277951.2:c.-233-7153C>G	NM_001277951.2:c.-233-7153C>A
ZNF83 transcript variant 16	NM_001277952.1:c.-478-2888=	NM_001277952.1:c.-478-2888C>T	NM_001277952.1:c.-478-2888C>G	NM_001277952.1:c.-478-2888C>A
ZNF83 transcript variant 16	NM_001277952.2:c.-478-2888=	NM_001277952.2:c.-478-2888C>T	NM_001277952.2:c.-478-2888C>G	NM_001277952.2:c.-478-2888C>A
ZNF83 transcript variant 17	NM_001348015.2:c.-484-2888=	NM_001348015.2:c.-484-2888C>T	NM_001348015.2:c.-484-2888C>G	NM_001348015.2:c.-484-2888C>A
ZNF83 transcript variant 18	NM_001348016.2:c.-360-2888=	NM_001348016.2:c.-360-2888C>T	NM_001348016.2:c.-360-2888C>G	NM_001348016.2:c.-360-2888C>A
ZNF83 transcript variant 19	NM_001348017.2:c.-360-2888=	NM_001348017.2:c.-360-2888C>T	NM_001348017.2:c.-360-2888C>G	NM_001348017.2:c.-360-2888C>A
ZNF83 transcript variant 20	NM_001348018.2:c.-233-7153=	NM_001348018.2:c.-233-7153C>T	NM_001348018.2:c.-233-7153C>G	NM_001348018.2:c.-233-7153C>A
ZNF83 transcript variant 21	NM_001348019.2:c.-360-2888=	NM_001348019.2:c.-360-2888C>T	NM_001348019.2:c.-360-2888C>G	NM_001348019.2:c.-360-2888C>A
ZNF83 transcript variant 5	NM_018300.3:c.-233-7153=	NM_018300.3:c.-233-7153C>T	NM_018300.3:c.-233-7153C>G	NM_018300.3:c.-233-7153C>A
ZNF83 transcript variant 5	NM_018300.4:c.-233-7153=	NM_018300.4:c.-233-7153C>T	NM_018300.4:c.-233-7153C>G	NM_018300.4:c.-233-7153C>A

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

81 SubSNP, 18 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	SC_JCM	ss706674	Aug 11, 2000 (83)
2	KWOK	ss1017942	Oct 13, 2000 (126)
3	KWOK	ss1634234	Oct 18, 2000 (126)
4	CSHL-HAPMAP	ss16809261	Feb 27, 2004 (126)
5	SSAHASNP	ss21550641	Apr 05, 2004 (126)
6	HGSV	ss81466140	Dec 15, 2007 (130)
7	HGSV	ss84075149	Dec 15, 2007 (130)
8	BCMHGSC_JDW	ss91003846	Mar 24, 2008 (129)
9	HUMANGENOME_JCVI	ss96273106	Feb 05, 2009 (130)
10	BGI	ss106059686	Feb 05, 2009 (130)
11	1000GENOMES	ss111504318	Jan 25, 2009 (130)
12	1000GENOMES	ss115270419	Jan 25, 2009 (130)
13	ILLUMINA-UK	ss117736919	Dec 01, 2009 (131)
14	ENSEMBL	ss132780494	Dec 01, 2009 (131)
15	GMI	ss155997162	Dec 01, 2009 (131)
16	COMPLETE_GENOMICS	ss168337517	Jul 04, 2010 (132)
17	COMPLETE_GENOMICS	ss170070981	Jul 04, 2010 (132)
18	COMPLETE_GENOMICS	ss171846076	Jul 04, 2010 (132)
19	BUSHMAN	ss203785715	Jul 04, 2010 (132)
20	BCM-HGSC-SUB	ss208402010	Jul 04, 2010 (132)
21	1000GENOMES	ss228185279	Jul 14, 2010 (132)
22	1000GENOMES	ss237710343	Jul 15, 2010 (132)
23	1000GENOMES	ss243908821	Jul 15, 2010 (132)
24	BL	ss255749083	May 09, 2011 (134)
25	GMI	ss283245917	May 04, 2012 (137)
26	GMI	ss287398274	Apr 25, 2013 (138)
27	PJP	ss292194095	May 09, 2011 (134)
28	TISHKOFF	ss566046899	Apr 25, 2013 (138)
29	SSMP	ss661913787	Apr 25, 2013 (138)
30	EVA-GONL	ss994401346	Aug 21, 2014 (142)
31	JMKIDD_LAB	ss1081972787	Aug 21, 2014 (142)
32	1000GENOMES	ss1363563944	Aug 21, 2014 (142)
33	DDI	ss1428432180	Apr 01, 2015 (144)
34	EVA_GENOME_DK	ss1578678746	Apr 01, 2015 (144)
35	EVA_UK10K_ALSPAC	ss1638156488	Apr 01, 2015 (144)
36	EVA_UK10K_TWINSUK	ss1681150521	Apr 01, 2015 (144)
37	EVA_DECODE	ss1698455886	Apr 01, 2015 (144)
38	HAMMER_LAB	ss1809355712	Sep 08, 2015 (146)
39	WEILL_CORNELL_DGM	ss1937903058	Feb 12, 2016 (147)
40	GENOMED	ss1968661370	Jul 19, 2016 (147)
41	JJLAB	ss2029727194	Sep 14, 2016 (149)
42	USC_VALOUEV	ss2158276874	Dec 20, 2016 (150)
43	HUMAN_LONGEVITY	ss2226481741	Dec 20, 2016 (150)
44	SYSTEMSBIOZJU	ss2629360368	Nov 08, 2017 (151)
45	GRF	ss2702889952	Nov 08, 2017 (151)
46	GNOMAD	ss2964026457	Nov 08, 2017 (151)
47	SWEGEN	ss3017647905	Nov 08, 2017 (151)
48	ILLUMINA	ss3021921671	Nov 08, 2017 (151)
49	BIOINF_KMB_FNS_UNIBA	ss3028694420	Nov 08, 2017 (151)
50	CSHL	ss3352350944	Nov 08, 2017 (151)
51	URBANLAB	ss3650938733	Oct 12, 2018 (152)
52	ILLUMINA	ss3652348620	Oct 12, 2018 (152)
53	EGCUT_WGS	ss3684381215	Jul 13, 2019 (153)
54	EVA_DECODE	ss3702971535	Jul 13, 2019 (153)
55	ILLUMINA	ss3725741899	Jul 13, 2019 (153)
56	ACPOP	ss3743128263	Jul 13, 2019 (153)
57	EVA	ss3756182883	Jul 13, 2019 (153)
58	PACBIO	ss3788560251	Jul 13, 2019 (153)
59	PACBIO	ss3793465543	Jul 13, 2019 (153)
60	PACBIO	ss3798352493	Jul 13, 2019 (153)
61	KHV_HUMAN_GENOMES	ss3821433921	Jul 13, 2019 (153)
62	EVA	ss3835515164	Apr 27, 2020 (154)
63	EVA	ss3841379272	Apr 27, 2020 (154)
64	EVA	ss3846885763	Apr 27, 2020 (154)
65	SGDP_PRJ	ss3888442367	Apr 27, 2020 (154)
66	KRGDB	ss3938599966	Apr 27, 2020 (154)
67	KOGIC	ss3981582341	Apr 27, 2020 (154)
68	TOPMED	ss5078131616	Apr 27, 2021 (155)
69	TOMMO_GENOMICS	ss5228249704	Apr 27, 2021 (155)
70	1000G_HIGH_COVERAGE	ss5307622651	Oct 16, 2022 (156)
71	EVA	ss5435463773	Oct 16, 2022 (156)
72	HUGCELL_USP	ss5500084791	Oct 16, 2022 (156)
73	1000G_HIGH_COVERAGE	ss5613506052	Oct 16, 2022 (156)
74	SANFORD_IMAGENETICS	ss5662599826	Oct 16, 2022 (156)
75	TOMMO_GENOMICS	ss5787048955	Oct 16, 2022 (156)
76	YY_MCH	ss5817691757	Oct 16, 2022 (156)
77	EVA	ss5840693207	Oct 16, 2022 (156)
78	EVA	ss5852328730	Oct 16, 2022 (156)
79	EVA	ss5928493726	Oct 16, 2022 (156)
80	EVA	ss5954005138	Oct 16, 2022 (156)
81	EVA	ss5981064543	Oct 16, 2022 (156)
82	1000Genomes	NC_000019.9 - 53125203	Oct 12, 2018 (152)
83	1000Genomes_30x	NC_000019.10 - 52621950	Oct 16, 2022 (156)
84	The Avon Longitudinal Study of Parents and Children	NC_000019.9 - 53125203	Oct 12, 2018 (152)
85	Genetic variation in the Estonian population	NC_000019.9 - 53125203	Oct 12, 2018 (152)
86	The Danish reference pan genome	NC_000019.9 - 53125203	Apr 27, 2020 (154)
87	gnomAD - Genomes	NC_000019.10 - 52621950	Apr 27, 2021 (155)
88	Genome of the Netherlands Release 5	NC_000019.9 - 53125203	Apr 27, 2020 (154)
89	KOREAN population from KRGDB	NC_000019.9 - 53125203	Apr 27, 2020 (154)
90	Korean Genome Project	NC_000019.10 - 52621950	Apr 27, 2020 (154)
91	Northern Sweden	NC_000019.9 - 53125203	Jul 13, 2019 (153)
92	Qatari	NC_000019.9 - 53125203	Apr 27, 2020 (154)
93	SGDP_PRJ	NC_000019.9 - 53125203	Apr 27, 2020 (154)
94	Siberian	NC_000019.9 - 53125203	Apr 27, 2020 (154)
95	8.3KJPN	NC_000019.9 - 53125203	Apr 27, 2021 (155)
96	14KJPN	NC_000019.10 - 52621950	Oct 16, 2022 (156)
97	TopMed	NC_000019.10 - 52621950	Apr 27, 2021 (155)
98	UK 10K study - Twins	NC_000019.9 - 53125203	Oct 12, 2018 (152)
99	ALFA	NC_000019.10 - 52621950	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs1089743	Mar 10, 2006 (126)
rs1306551	Feb 20, 2003 (111)
rs58529314	May 24, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
45777360, ss3938599966	NC_000019.9:53125202:G:A	NC_000019.10:52621949:G:A	(self)
ss81466140, ss84075149, ss91003846, ss111504318, ss115270419, ss117736919, ss168337517, ss170070981, ss171846076, ss203785715, ss208402010, ss255749083, ss283245917, ss287398274, ss292194095, ss1698455886	NC_000019.8:57817014:G:C	NC_000019.10:52621949:G:C	(self)
76985720, 42620911, 30119463, 4859667, 18987053, 45777360, 16413128, 19944980, 40459347, 10793228, 86219011, 42620911, ss228185279, ss237710343, ss243908821, ss566046899, ss661913787, ss994401346, ss1081972787, ss1363563944, ss1428432180, ss1578678746, ss1638156488, ss1681150521, ss1809355712, ss1937903058, ss1968661370, ss2029727194, ss2158276874, ss2629360368, ss2702889952, ss2964026457, ss3017647905, ss3021921671, ss3352350944, ss3652348620, ss3684381215, ss3743128263, ss3756182883, ss3788560251, ss3793465543, ss3798352493, ss3835515164, ss3841379272, ss3888442367, ss3938599966, ss5228249704, ss5435463773, ss5662599826, ss5840693207, ss5954005138, ss5981064543	NC_000019.9:53125202:G:C	NC_000019.10:52621949:G:C	(self)
101031987, 542929415, 37960342, 120886059, 293677280, 7889749867, ss2226481741, ss3028694420, ss3650938733, ss3702971535, ss3725741899, ss3821433921, ss3846885763, ss3981582341, ss5078131616, ss5307622651, ss5500084791, ss5613506052, ss5787048955, ss5817691757, ss5852328730, ss5928493726	NC_000019.10:52621949:G:C	NC_000019.10:52621949:G:C	(self)
ss16809261, ss21550641	NT_011109.15:25393392:G:C	NC_000019.10:52621949:G:C	(self)
ss706674, ss1017942, ss1634234, ss96273106, ss106059686, ss132780494, ss155997162	NT_011109.16:25393420:G:C	NC_000019.10:52621949:G:C	(self)
45777360, ss3938599966	NC_000019.9:53125202:G:T	NC_000019.10:52621949:G:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs536045

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs536045