Name: rs57108038
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs57108038

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr1:224139765-224139803 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(ACAT)₅ / del(ACAT)₄ / del(ACAT…
del(ACAT)₅ / del(ACAT)₄ / del(ACAT)₃ / del(ACAT)₂ / delACAT / dupACAT / dup(ACAT)₂ / dup(ACAT)₃ / dup(ACAT)₄ / dup(ACAT)₅
Variation Type: Indel Insertion and Deletion
Frequency: dupACAT=0.002471 (654/264690, TOPMED)
delACAT=0.4167 (2607/6256, ALFA)
(CATA)₉CAT=0.28 (24/86, Vietnamese)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: FBXO28 : Intron Variant
LOC124903813 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	6256	CATACATACATACATACATACATACATACATACATACAT=0.5833	CATACATACATACATACAT=0.0000, CATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACAT=0.4167, CATACATACATACATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.0000
European	Sub	4453	CATACATACATACATACATACATACATACATACATACAT=0.4159	CATACATACATACATACAT=0.0000, CATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACAT=0.5841, CATACATACATACATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.0000
African	Sub	1388	CATACATACATACATACATACATACATACATACATACAT=1.0000	CATACATACATACATACAT=0.0000, CATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.0000
African Others	Sub	52	CATACATACATACATACATACATACATACATACATACAT=1.00	CATACATACATACATACAT=0.00, CATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.00
African American	Sub	1336	CATACATACATACATACATACATACATACATACATACAT=1.0000	CATACATACATACATACAT=0.0000, CATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.0000, CATACATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.0000
Asian	Sub	34	CATACATACATACATACATACATACATACATACATACAT=1.00	CATACATACATACATACAT=0.00, CATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.00
East Asian	Sub	24	CATACATACATACATACATACATACATACATACATACAT=1.00	CATACATACATACATACAT=0.00, CATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.00
Other Asian	Sub	10	CATACATACATACATACATACATACATACATACATACAT=1.0	CATACATACATACATACAT=0.0, CATACATACATACATACATACAT=0.0, CATACATACATACATACATACATACAT=0.0, CATACATACATACATACATACATACATACAT=0.0, CATACATACATACATACATACATACATACATACAT=0.0, CATACATACATACATACATACATACATACATACATACATACAT=0.0, CATACATACATACATACATACATACATACATACATACATACATACAT=0.0, CATACATACATACATACATACATACATACATACATACATACATACATACAT=0.0, CATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.0, CATACATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.0
Latin American 1	Sub	46	CATACATACATACATACATACATACATACATACATACAT=1.00	CATACATACATACATACAT=0.00, CATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.00
Latin American 2	Sub	180	CATACATACATACATACATACATACATACATACATACAT=1.000	CATACATACATACATACAT=0.000, CATACATACATACATACATACAT=0.000, CATACATACATACATACATACATACAT=0.000, CATACATACATACATACATACATACATACAT=0.000, CATACATACATACATACATACATACATACATACAT=0.000, CATACATACATACATACATACATACATACATACATACATACAT=0.000, CATACATACATACATACATACATACATACATACATACATACATACAT=0.000, CATACATACATACATACATACATACATACATACATACATACATACATACAT=0.000, CATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.000, CATACATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.000
South Asian	Sub	14	CATACATACATACATACATACATACATACATACATACAT=1.00	CATACATACATACATACAT=0.00, CATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.00, CATACATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.00
Other	Sub	141	CATACATACATACATACATACATACATACATACATACAT=0.957	CATACATACATACATACAT=0.000, CATACATACATACATACATACAT=0.000, CATACATACATACATACATACATACAT=0.000, CATACATACATACATACATACATACATACAT=0.000, CATACATACATACATACATACATACATACATACAT=0.043, CATACATACATACATACATACATACATACATACATACATACAT=0.000, CATACATACATACATACATACATACATACATACATACATACATACAT=0.000, CATACATACATACATACATACATACATACATACATACATACATACATACAT=0.000, CATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.000, CATACATACATACATACATACATACATACATACATACATACATACATACATACATACAT=0.000

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	- No frequency provided	dupACAT=0.002471
Allele Frequency Aggregator	Total	Global	6256	(CATA)₉CAT=0.5833	del(ACAT)₅=0.0000, del(ACAT)₄=0.0000, del(ACAT)₃=0.0000, del(ACAT)₂=0.0000, delACAT=0.4167, dupACAT=0.0000, dup(ACAT)₂=0.0000, dup(ACAT)₃=0.0000, dup(ACAT)₄=0.0000, dup(ACAT)₅=0.0000
Allele Frequency Aggregator	European	Sub	4453	(CATA)₉CAT=0.4159	del(ACAT)₅=0.0000, del(ACAT)₄=0.0000, del(ACAT)₃=0.0000, del(ACAT)₂=0.0000, delACAT=0.5841, dupACAT=0.0000, dup(ACAT)₂=0.0000, dup(ACAT)₃=0.0000, dup(ACAT)₄=0.0000, dup(ACAT)₅=0.0000
Allele Frequency Aggregator	African	Sub	1388	(CATA)₉CAT=1.0000	del(ACAT)₅=0.0000, del(ACAT)₄=0.0000, del(ACAT)₃=0.0000, del(ACAT)₂=0.0000, delACAT=0.0000, dupACAT=0.0000, dup(ACAT)₂=0.0000, dup(ACAT)₃=0.0000, dup(ACAT)₄=0.0000, dup(ACAT)₅=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	180	(CATA)₉CAT=1.000	del(ACAT)₅=0.000, del(ACAT)₄=0.000, del(ACAT)₃=0.000, del(ACAT)₂=0.000, delACAT=0.000, dupACAT=0.000, dup(ACAT)₂=0.000, dup(ACAT)₃=0.000, dup(ACAT)₄=0.000, dup(ACAT)₅=0.000
Allele Frequency Aggregator	Other	Sub	141	(CATA)₉CAT=0.957	del(ACAT)₅=0.000, del(ACAT)₄=0.000, del(ACAT)₃=0.000, del(ACAT)₂=0.000, delACAT=0.043, dupACAT=0.000, dup(ACAT)₂=0.000, dup(ACAT)₃=0.000, dup(ACAT)₄=0.000, dup(ACAT)₅=0.000
Allele Frequency Aggregator	Latin American 1	Sub	46	(CATA)₉CAT=1.00	del(ACAT)₅=0.00, del(ACAT)₄=0.00, del(ACAT)₃=0.00, del(ACAT)₂=0.00, delACAT=0.00, dupACAT=0.00, dup(ACAT)₂=0.00, dup(ACAT)₃=0.00, dup(ACAT)₄=0.00, dup(ACAT)₅=0.00
Allele Frequency Aggregator	Asian	Sub	34	(CATA)₉CAT=1.00	del(ACAT)₅=0.00, del(ACAT)₄=0.00, del(ACAT)₃=0.00, del(ACAT)₂=0.00, delACAT=0.00, dupACAT=0.00, dup(ACAT)₂=0.00, dup(ACAT)₃=0.00, dup(ACAT)₄=0.00, dup(ACAT)₅=0.00
Allele Frequency Aggregator	South Asian	Sub	14	(CATA)₉CAT=1.00	del(ACAT)₅=0.00, del(ACAT)₄=0.00, del(ACAT)₃=0.00, del(ACAT)₂=0.00, delACAT=0.00, dupACAT=0.00, dup(ACAT)₂=0.00, dup(ACAT)₃=0.00, dup(ACAT)₄=0.00, dup(ACAT)₅=0.00
A Vietnamese Genetic Variation Database	Global	Study-wide	86	(CATA)₉CAT=0.28	delACAT=0.72

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 1	NC_000001.11:g.224139768ACAT[4]
GRCh38.p14 chr 1	NC_000001.11:g.224139768ACAT[5]
GRCh38.p14 chr 1	NC_000001.11:g.224139768ACAT[6]
GRCh38.p14 chr 1	NC_000001.11:g.224139768ACAT[7]
GRCh38.p14 chr 1	NC_000001.11:g.224139768ACAT[8]
GRCh38.p14 chr 1	NC_000001.11:g.224139768ACAT[10]
GRCh38.p14 chr 1	NC_000001.11:g.224139768ACAT[11]
GRCh38.p14 chr 1	NC_000001.11:g.224139768ACAT[12]
GRCh38.p14 chr 1	NC_000001.11:g.224139768ACAT[13]
GRCh38.p14 chr 1	NC_000001.11:g.224139768ACAT[14]
GRCh37.p13 chr 1	NC_000001.10:g.224327470ACAT[4]
GRCh37.p13 chr 1	NC_000001.10:g.224327470ACAT[5]
GRCh37.p13 chr 1	NC_000001.10:g.224327470ACAT[6]
GRCh37.p13 chr 1	NC_000001.10:g.224327470ACAT[7]
GRCh37.p13 chr 1	NC_000001.10:g.224327470ACAT[8]
GRCh37.p13 chr 1	NC_000001.10:g.224327470ACAT[10]
GRCh37.p13 chr 1	NC_000001.10:g.224327470ACAT[11]
GRCh37.p13 chr 1	NC_000001.10:g.224327470ACAT[12]
GRCh37.p13 chr 1	NC_000001.10:g.224327470ACAT[13]
GRCh37.p13 chr 1	NC_000001.10:g.224327470ACAT[14]

Gene: FBXO28, F-box protein 28 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
FBXO28 transcript variant 2	NM_001136115.3:c.516+5553… NM_001136115.3:c.516+5553CATA[4]	N/A	Intron Variant
FBXO28 transcript variant 1	NM_015176.4:c.516+5553CAT… NM_015176.4:c.516+5553CATA[4]	N/A	Intron Variant
FBXO28 transcript variant 3	NR_049764.2:n.	N/A	Intron Variant

Gene: LOC124903813, uncharacterized LOC124903813 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LOC124903813 transcript	XM_047436340.1:c.246+2781… XM_047436340.1:c.246+2781TATG[4]	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(CATA)₉CAT=	del(ACAT)₅	del(ACAT)₄	del(ACAT)₃	del(ACAT)₂	delACAT	dupACAT	dup(ACAT)₂	dup(ACAT)₃	dup(ACAT)₄	dup(ACAT)₅
GRCh38.p14 chr 1	NC_000001.11:g.224139765_224139803=	NC_000001.11:g.224139768ACAT[4]	NC_000001.11:g.224139768ACAT[5]	NC_000001.11:g.224139768ACAT[6]	NC_000001.11:g.224139768ACAT[7]	NC_000001.11:g.224139768ACAT[8]	NC_000001.11:g.224139768ACAT[10]	NC_000001.11:g.224139768ACAT[11]	NC_000001.11:g.224139768ACAT[12]	NC_000001.11:g.224139768ACAT[13]	NC_000001.11:g.224139768ACAT[14]
GRCh37.p13 chr 1	NC_000001.10:g.224327467_224327505=	NC_000001.10:g.224327470ACAT[4]	NC_000001.10:g.224327470ACAT[5]	NC_000001.10:g.224327470ACAT[6]	NC_000001.10:g.224327470ACAT[7]	NC_000001.10:g.224327470ACAT[8]	NC_000001.10:g.224327470ACAT[10]	NC_000001.10:g.224327470ACAT[11]	NC_000001.10:g.224327470ACAT[12]	NC_000001.10:g.224327470ACAT[13]	NC_000001.10:g.224327470ACAT[14]
FBXO28 transcript variant 2	NM_001136115.2:c.516+5553=	NM_001136115.2:c.516+5553CATA[4]	NM_001136115.2:c.516+5553CATA[5]	NM_001136115.2:c.516+5553CATA[6]	NM_001136115.2:c.516+5553CATA[7]	NM_001136115.2:c.516+5553CATA[8]	NM_001136115.2:c.516+5553CATA[10]	NM_001136115.2:c.516+5553CATA[11]	NM_001136115.2:c.516+5553CATA[12]	NM_001136115.2:c.516+5553CATA[13]	NM_001136115.2:c.516+5553CATA[14]
FBXO28 transcript variant 2	NM_001136115.3:c.516+5553=	NM_001136115.3:c.516+5553CATA[4]	NM_001136115.3:c.516+5553CATA[5]	NM_001136115.3:c.516+5553CATA[6]	NM_001136115.3:c.516+5553CATA[7]	NM_001136115.3:c.516+5553CATA[8]	NM_001136115.3:c.516+5553CATA[10]	NM_001136115.3:c.516+5553CATA[11]	NM_001136115.3:c.516+5553CATA[12]	NM_001136115.3:c.516+5553CATA[13]	NM_001136115.3:c.516+5553CATA[14]
FBXO28 transcript variant 1	NM_015176.3:c.516+5553=	NM_015176.3:c.516+5553CATA[4]	NM_015176.3:c.516+5553CATA[5]	NM_015176.3:c.516+5553CATA[6]	NM_015176.3:c.516+5553CATA[7]	NM_015176.3:c.516+5553CATA[8]	NM_015176.3:c.516+5553CATA[10]	NM_015176.3:c.516+5553CATA[11]	NM_015176.3:c.516+5553CATA[12]	NM_015176.3:c.516+5553CATA[13]	NM_015176.3:c.516+5553CATA[14]
FBXO28 transcript variant 1	NM_015176.4:c.516+5553=	NM_015176.4:c.516+5553CATA[4]	NM_015176.4:c.516+5553CATA[5]	NM_015176.4:c.516+5553CATA[6]	NM_015176.4:c.516+5553CATA[7]	NM_015176.4:c.516+5553CATA[8]	NM_015176.4:c.516+5553CATA[10]	NM_015176.4:c.516+5553CATA[11]	NM_015176.4:c.516+5553CATA[12]	NM_015176.4:c.516+5553CATA[13]	NM_015176.4:c.516+5553CATA[14]
LOC124903813 transcript	XM_047436340.1:c.246+2816=	XM_047436340.1:c.246+2781TATG[4]	XM_047436340.1:c.246+2781TATG[5]	XM_047436340.1:c.246+2781TATG[6]	XM_047436340.1:c.246+2781TATG[7]	XM_047436340.1:c.246+2781TATG[8]	XM_047436340.1:c.246+2781TATG[10]	XM_047436340.1:c.246+2781TATG[11]	XM_047436340.1:c.246+2781TATG[12]	XM_047436340.1:c.246+2781TATG[13]	XM_047436340.1:c.246+2781TATG[14]

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

37 SubSNP, 17 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	HGSV	ss82328317	Dec 14, 2007 (129)
2	HGSV	ss82700830	Dec 14, 2007 (129)
3	HUMANGENOME_JCVI	ss95256272	Mar 15, 2016 (147)
4	HUMANGENOME_JCVI	ss95256273	Mar 15, 2016 (147)
5	HUMANGENOME_JCVI	ss98582604	Mar 15, 2016 (147)
6	SSMP	ss663161571	Apr 01, 2015 (144)
7	BILGI_BIOE	ss666128807	Apr 25, 2013 (138)
8	DDI	ss1536266835	Apr 01, 2015 (144)
9	SWEGEN	ss2988534595	Nov 08, 2017 (151)
10	MCHAISSO	ss3063628268	Nov 08, 2017 (151)
11	MCHAISSO	ss3064446345	Nov 08, 2017 (151)
12	MCHAISSO	ss3065352577	Nov 08, 2017 (151)
13	URBANLAB	ss3646898568	Oct 11, 2018 (152)
14	PACBIO	ss3783701454	Jul 12, 2019 (153)
15	PACBIO	ss3789311458	Jul 12, 2019 (153)
16	PACBIO	ss3794183883	Jul 12, 2019 (153)
17	KHV_HUMAN_GENOMES	ss3800401706	Jul 12, 2019 (153)
18	EVA	ss3826670241	Apr 25, 2020 (154)
19	GNOMAD	ss4012174895	Apr 25, 2021 (155)
20	GNOMAD	ss4012174896	Apr 25, 2021 (155)
21	GNOMAD	ss4012174897	Apr 25, 2021 (155)
22	GNOMAD	ss4012174898	Apr 25, 2021 (155)
23	GNOMAD	ss4012174899	Apr 25, 2021 (155)
24	GNOMAD	ss4012174930	Apr 25, 2021 (155)
25	GNOMAD	ss4012174931	Apr 25, 2021 (155)
26	GNOMAD	ss4012174932	Apr 25, 2021 (155)
27	GNOMAD	ss4012174933	Apr 25, 2021 (155)
28	GNOMAD	ss4012174934	Apr 25, 2021 (155)
29	TOPMED	ss4485357088	Apr 25, 2021 (155)
30	TOMMO_GENOMICS	ss5148661355	Apr 25, 2021 (155)
31	TOMMO_GENOMICS	ss5148661359	Apr 25, 2021 (155)
32	1000G_HIGH_COVERAGE	ss5245972307	Oct 12, 2022 (156)
33	HUGCELL_USP	ss5446390048	Oct 12, 2022 (156)
34	TOMMO_GENOMICS	ss5676485965	Oct 12, 2022 (156)
35	TOMMO_GENOMICS	ss5676485968	Oct 12, 2022 (156)
36	EVA	ss5833333451	Oct 12, 2022 (156)
37	EVA	ss5980017783	Oct 12, 2022 (156)
38	gnomAD - Genomes Submission ignored due to conflicting rows: Row 41036698 (NC_000001.11:224139764::CATA 347/134426) Row 41036699 (NC_000001.11:224139764::CATACATA 333/134378) Row 41036700 (NC_000001.11:224139764::CATACATACATA 174/134424)...	-	Apr 25, 2021 (155)
39	gnomAD - Genomes Submission ignored due to conflicting rows: Row 41036698 (NC_000001.11:224139764::CATA 347/134426) Row 41036699 (NC_000001.11:224139764::CATACATA 333/134378) Row 41036700 (NC_000001.11:224139764::CATACATACATA 174/134424)...	-	Apr 25, 2021 (155)
40	gnomAD - Genomes Submission ignored due to conflicting rows: Row 41036698 (NC_000001.11:224139764::CATA 347/134426) Row 41036699 (NC_000001.11:224139764::CATACATA 333/134378) Row 41036700 (NC_000001.11:224139764::CATACATACATA 174/134424)...	-	Apr 25, 2021 (155)
41	gnomAD - Genomes Submission ignored due to conflicting rows: Row 41036698 (NC_000001.11:224139764::CATA 347/134426) Row 41036699 (NC_000001.11:224139764::CATACATA 333/134378) Row 41036700 (NC_000001.11:224139764::CATACATACATA 174/134424)...	-	Apr 25, 2021 (155)
42	gnomAD - Genomes Submission ignored due to conflicting rows: Row 41036698 (NC_000001.11:224139764::CATA 347/134426) Row 41036699 (NC_000001.11:224139764::CATACATA 333/134378) Row 41036700 (NC_000001.11:224139764::CATACATACATA 174/134424)...	-	Apr 25, 2021 (155)
43	gnomAD - Genomes Submission ignored due to conflicting rows: Row 41036698 (NC_000001.11:224139764::CATA 347/134426) Row 41036699 (NC_000001.11:224139764::CATACATA 333/134378) Row 41036700 (NC_000001.11:224139764::CATACATACATA 174/134424)...	-	Apr 25, 2021 (155)
44	gnomAD - Genomes Submission ignored due to conflicting rows: Row 41036698 (NC_000001.11:224139764::CATA 347/134426) Row 41036699 (NC_000001.11:224139764::CATACATA 333/134378) Row 41036700 (NC_000001.11:224139764::CATACATACATA 174/134424)...	-	Apr 25, 2021 (155)
45	gnomAD - Genomes Submission ignored due to conflicting rows: Row 41036698 (NC_000001.11:224139764::CATA 347/134426) Row 41036699 (NC_000001.11:224139764::CATACATA 333/134378) Row 41036700 (NC_000001.11:224139764::CATACATACATA 174/134424)...	-	Apr 25, 2021 (155)
46	gnomAD - Genomes Submission ignored due to conflicting rows: Row 41036698 (NC_000001.11:224139764::CATA 347/134426) Row 41036699 (NC_000001.11:224139764::CATACATA 333/134378) Row 41036700 (NC_000001.11:224139764::CATACATACATA 174/134424)...	-	Apr 25, 2021 (155)
47	gnomAD - Genomes Submission ignored due to conflicting rows: Row 41036698 (NC_000001.11:224139764::CATA 347/134426) Row 41036699 (NC_000001.11:224139764::CATACATA 333/134378) Row 41036700 (NC_000001.11:224139764::CATACATACATA 174/134424)...	-	Apr 25, 2021 (155)
48	8.3KJPN Submission ignored due to conflicting rows: Row 6630662 (NC_000001.10:224327466:CATA: 8043/16760) Row 6630666 (NC_000001.10:224327466::CATACATACATA 212/16760)	-	Apr 25, 2021 (155)
49	8.3KJPN Submission ignored due to conflicting rows: Row 6630662 (NC_000001.10:224327466:CATA: 8043/16760) Row 6630666 (NC_000001.10:224327466::CATACATACATA 212/16760)	-	Apr 25, 2021 (155)
50	14KJPN Submission ignored due to conflicting rows: Row 10323069 (NC_000001.11:224139764:CATA: 13650/28256) Row 10323072 (NC_000001.11:224139764::CATACATACATA 343/28256)	-	Oct 12, 2022 (156)
51	14KJPN Submission ignored due to conflicting rows: Row 10323069 (NC_000001.11:224139764:CATA: 13650/28256) Row 10323072 (NC_000001.11:224139764::CATACATACATA 343/28256)	-	Oct 12, 2022 (156)
52	TopMed	NC_000001.11 - 224139765	Apr 25, 2021 (155)
53	A Vietnamese Genetic Variation Database	NC_000001.10 - 224327467	Jul 12, 2019 (153)
54	ALFA	NC_000001.11 - 224139765	Apr 25, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4012174934	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATA:	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACAT	(self)
7292953316	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACAT	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACAT	(self)
ss4012174933	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATA:	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACAT	(self)
7292953316	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACAT	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACAT	(self)
ss4012174932	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATA:	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACAT	(self)
7292953316	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACAT	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACAT	(self)
ss4012174931	NC_000001.11:224139764:CATACATA:	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACAT	(self)
7292953316	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACAT	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACAT	(self)
ss95256272	NT_167186.1:17845248:ACATACAT:	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACAT	(self)
685319, ss663161571, ss666128807, ss1536266835, ss2988534595, ss3783701454, ss3789311458, ss3794183883, ss3826670241, ss5148661355, ss5833333451, ss5980017783	NC_000001.10:224327466:CATA:	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACAT	(self)
ss3800401706, ss4012174930, ss5245972307, ss5446390048, ss5676485965	NC_000001.11:224139764:CATA:	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACAT	(self)
7292953316	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACAT	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACAT	(self)
ss3646898568	NC_000001.11:224139782:TACA:	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACAT	(self)
ss95256273	NT_167186.1:17845261:CATA:	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACAT	(self)
ss98582604	NT_167186.1:17845279:TACA:	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACAT	(self)
48963423, ss4012174895, ss4485357088	NC_000001.11:224139764::CATA	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACATACATACAT	(self)
7292953316	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACATACATACAT	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACATACATACAT	(self)
ss95256273	NT_167186.1:17845261:CATA:CATACATA	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACATACATACAT	(self)
ss3063628268, ss3064446345, ss3065352577, ss4012174896	NC_000001.11:224139764::CATACATA	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACATACATACATACAT	(self)
7292953316	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACATACATACATACAT	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACATACATACATACAT	(self)
ss82328317, ss82700830	NT_167186.1:17845284::ACATACAT	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACATACATACATACAT	(self)
ss5148661359	NC_000001.10:224327466::CATACATACA… NC_000001.10:224327466::CATACATACATA	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACATACATACATACATACAT	(self)
ss4012174897, ss5676485968	NC_000001.11:224139764::CATACATACA… NC_000001.11:224139764::CATACATACATA	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACATACATACATACATACAT	(self)
7292953316	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACATACATACATACATACAT	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACATACATACATACATACAT	(self)
ss98582604	NT_167186.1:17845279:TACA:TACATACA… NT_167186.1:17845279:TACA:TACATACATACATACA	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACATACATACATACATACAT	(self)
ss4012174898	NC_000001.11:224139764::CATACATACA… NC_000001.11:224139764::CATACATACATACATA	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACATACATACATACATACATACAT	(self)
7292953316	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACATACATACATACATACATACAT	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACATACATACATACATACATACAT	(self)
ss4012174899	NC_000001.11:224139764::CATACATACA… NC_000001.11:224139764::CATACATACATACATACATA	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACATACATACATACATACATACATACAT	(self)
7292953316	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACATACATACATACATACATACATACAT	NC_000001.11:224139764:CATACATACAT… NC_000001.11:224139764:CATACATACATACATACATACATACATACATACATACAT:CATACATACATACATACATACATACATACATACATACATACATACATACATACATACAT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs57108038

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs57108038