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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs6044680

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr20:17205717 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
T>A / T>C
Variation Type
SNV Single Nucleotide Variation
Frequency
T=0.369758 (109075/294990, ALFA)
T=0.346016 (91587/264690, TOPMED)
T=0.347830 (48653/139876, GnomAD) (+ 22 more)
T=0.32079 (25234/78662, PAGE_STUDY)
T=0.17351 (4903/28258, 14KJPN)
T=0.17327 (2904/16760, 8.3KJPN)
T=0.2753 (1763/6404, 1000G_30x)
T=0.2664 (1334/5008, 1000G)
T=0.3786 (1696/4480, Estonian)
T=0.3765 (1451/3854, ALSPAC)
T=0.3838 (1423/3708, TWINSUK)
T=0.1785 (523/2930, KOREAN)
T=0.3325 (693/2084, HGDP_Stanford)
T=0.2686 (505/1880, HapMap)
T=0.1599 (293/1832, Korea1K)
T=0.3257 (370/1136, Daghestan)
T=0.353 (352/998, GoNL)
T=0.152 (120/792, PRJEB37584)
T=0.408 (245/600, NorthernSweden)
T=0.183 (91/496, SGDP_PRJ)
T=0.347 (75/216, Qatari)
T=0.061 (13/214, Vietnamese)
T=0.34 (22/64, Ancient Sardinia)
T=0.24 (10/42, Siberian)
T=0.40 (16/40, GENOME_DK)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
None
Publications
1 citation
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 294990 T=0.369758 C=0.630242
European Sub 260764 T=0.376352 C=0.623648
African Sub 7954 T=0.2704 C=0.7296
African Others Sub 318 T=0.233 C=0.767
African American Sub 7636 T=0.2720 C=0.7280
Asian Sub 3904 T=0.1447 C=0.8553
East Asian Sub 3158 T=0.1529 C=0.8471
Other Asian Sub 746 T=0.110 C=0.890
Latin American 1 Sub 1132 T=0.3719 C=0.6281
Latin American 2 Sub 7224 T=0.5155 C=0.4845
South Asian Sub 5220 T=0.2165 C=0.7835
Other Sub 8792 T=0.3350 C=0.6650


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
Allele Frequency Aggregator Total Global 294990 T=0.369758 C=0.630242
Allele Frequency Aggregator European Sub 260764 T=0.376352 C=0.623648
Allele Frequency Aggregator Other Sub 8792 T=0.3350 C=0.6650
Allele Frequency Aggregator African Sub 7954 T=0.2704 C=0.7296
Allele Frequency Aggregator Latin American 2 Sub 7224 T=0.5155 C=0.4845
Allele Frequency Aggregator South Asian Sub 5220 T=0.2165 C=0.7835
Allele Frequency Aggregator Asian Sub 3904 T=0.1447 C=0.8553
Allele Frequency Aggregator Latin American 1 Sub 1132 T=0.3719 C=0.6281
TopMed Global Study-wide 264690 T=0.346016 C=0.653984
gnomAD - Genomes Global Study-wide 139876 T=0.347830 C=0.652170
gnomAD - Genomes European Sub 75760 T=0.38095 C=0.61905
gnomAD - Genomes African Sub 41918 T=0.26461 C=0.73539
gnomAD - Genomes American Sub 13624 T=0.46866 C=0.53134
gnomAD - Genomes Ashkenazi Jewish Sub 3316 T=0.3456 C=0.6544
gnomAD - Genomes East Asian Sub 3110 T=0.1270 C=0.8730
gnomAD - Genomes Other Sub 2148 T=0.3603 C=0.6397
The PAGE Study Global Study-wide 78662 T=0.32079 C=0.67921
The PAGE Study AfricanAmerican Sub 32508 T=0.26455 C=0.73545
The PAGE Study Mexican Sub 10806 T=0.52415 C=0.47585
The PAGE Study Asian Sub 8312 T=0.1565 C=0.8435
The PAGE Study PuertoRican Sub 7912 T=0.3926 C=0.6074
The PAGE Study NativeHawaiian Sub 4526 T=0.1666 C=0.8334
The PAGE Study Cuban Sub 4226 T=0.3992 C=0.6008
The PAGE Study Dominican Sub 3828 T=0.3320 C=0.6680
The PAGE Study CentralAmerican Sub 2450 T=0.5008 C=0.4992
The PAGE Study SouthAmerican Sub 1980 T=0.4843 C=0.5157
The PAGE Study NativeAmerican Sub 1258 T=0.3800 C=0.6200
The PAGE Study SouthAsian Sub 856 T=0.218 C=0.782
14KJPN JAPANESE Study-wide 28258 T=0.17351 C=0.82649
8.3KJPN JAPANESE Study-wide 16760 T=0.17327 C=0.82673
1000Genomes_30x Global Study-wide 6404 T=0.2753 C=0.7247
1000Genomes_30x African Sub 1786 T=0.2492 C=0.7508
1000Genomes_30x Europe Sub 1266 T=0.3760 C=0.6240
1000Genomes_30x South Asian Sub 1202 T=0.1722 C=0.8278
1000Genomes_30x East Asian Sub 1170 T=0.1171 C=0.8829
1000Genomes_30x American Sub 980 T=0.508 C=0.492
1000Genomes Global Study-wide 5008 T=0.2664 C=0.7336
1000Genomes African Sub 1322 T=0.2451 C=0.7549
1000Genomes East Asian Sub 1008 T=0.1200 C=0.8800
1000Genomes Europe Sub 1006 T=0.3748 C=0.6252
1000Genomes South Asian Sub 978 T=0.168 C=0.832
1000Genomes American Sub 694 T=0.501 C=0.499
Genetic variation in the Estonian population Estonian Study-wide 4480 T=0.3786 C=0.6214
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 T=0.3765 C=0.6235
UK 10K study - Twins TWIN COHORT Study-wide 3708 T=0.3838 C=0.6162
KOREAN population from KRGDB KOREAN Study-wide 2930 T=0.1785 A=0.0000, C=0.8215
HGDP-CEPH-db Supplement 1 Global Study-wide 2084 T=0.3325 C=0.6675
HGDP-CEPH-db Supplement 1 Est_Asia Sub 470 T=0.179 C=0.821
HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 T=0.266 C=0.734
HGDP-CEPH-db Supplement 1 Middle_Est Sub 350 T=0.366 C=0.634
HGDP-CEPH-db Supplement 1 Europe Sub 320 T=0.394 C=0.606
HGDP-CEPH-db Supplement 1 Africa Sub 242 T=0.194 C=0.806
HGDP-CEPH-db Supplement 1 America Sub 216 T=0.843 C=0.157
HGDP-CEPH-db Supplement 1 Oceania Sub 72 T=0.22 C=0.78
HapMap Global Study-wide 1880 T=0.2686 C=0.7314
HapMap American Sub 762 T=0.294 C=0.706
HapMap African Sub 688 T=0.282 C=0.718
HapMap Asian Sub 254 T=0.118 C=0.882
HapMap Europe Sub 176 T=0.324 C=0.676
Korean Genome Project KOREAN Study-wide 1832 T=0.1599 C=0.8401
Genome-wide autozygosity in Daghestan Global Study-wide 1136 T=0.3257 C=0.6743
Genome-wide autozygosity in Daghestan Daghestan Sub 628 T=0.328 C=0.672
Genome-wide autozygosity in Daghestan Near_East Sub 144 T=0.333 C=0.667
Genome-wide autozygosity in Daghestan Central Asia Sub 122 T=0.328 C=0.672
Genome-wide autozygosity in Daghestan Europe Sub 108 T=0.407 C=0.593
Genome-wide autozygosity in Daghestan South Asian Sub 98 T=0.21 C=0.79
Genome-wide autozygosity in Daghestan Caucasus Sub 36 T=0.31 C=0.69
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 T=0.353 C=0.647
CNV burdens in cranial meningiomas Global Study-wide 792 T=0.152 C=0.848
CNV burdens in cranial meningiomas CRM Sub 792 T=0.152 C=0.848
Northern Sweden ACPOP Study-wide 600 T=0.408 C=0.592
SGDP_PRJ Global Study-wide 496 T=0.183 C=0.817
Qatari Global Study-wide 216 T=0.347 C=0.653
A Vietnamese Genetic Variation Database Global Study-wide 214 T=0.061 C=0.939
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 64 T=0.34 C=0.66
Siberian Global Study-wide 42 T=0.24 C=0.76
The Danish reference pan genome Danish Study-wide 40 T=0.40 C=0.60
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 20 NC_000020.11:g.17205717T>A
GRCh38.p14 chr 20 NC_000020.11:g.17205717T>C
GRCh37.p13 chr 20 NC_000020.10:g.17186362T>A
GRCh37.p13 chr 20 NC_000020.10:g.17186362T>C
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement T= A C
GRCh38.p14 chr 20 NC_000020.11:g.17205717= NC_000020.11:g.17205717T>A NC_000020.11:g.17205717T>C
GRCh37.p13 chr 20 NC_000020.10:g.17186362= NC_000020.10:g.17186362T>A NC_000020.10:g.17186362T>C
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

138 SubSNP, 25 Frequency submissions
No Submitter Submission ID Date (Build)
1 SC_SNP ss8354942 Apr 21, 2003 (114)
2 SSAHASNP ss21795149 Apr 05, 2004 (121)
3 PERLEGEN ss24594372 Sep 20, 2004 (123)
4 ILLUMINA ss66845597 Nov 30, 2006 (127)
5 ILLUMINA ss67437604 Nov 30, 2006 (127)
6 ILLUMINA ss67791750 Nov 30, 2006 (127)
7 CSHL-HAPMAP ss68425211 Jan 12, 2007 (127)
8 ILLUMINA ss70855816 May 26, 2008 (130)
9 ILLUMINA ss71442206 May 17, 2007 (127)
10 ILLUMINA ss75897415 Dec 07, 2007 (129)
11 HGSV ss78400339 Dec 07, 2007 (129)
12 ILLUMINA ss79215131 Dec 16, 2007 (130)
13 KRIBB_YJKIM ss84453516 Dec 16, 2007 (130)
14 HGSV ss85625447 Dec 16, 2007 (130)
15 BCMHGSC_JDW ss91655294 Mar 24, 2008 (129)
16 HUMANGENOME_JCVI ss96188382 Feb 06, 2009 (130)
17 BGI ss106181461 Feb 06, 2009 (130)
18 1000GENOMES ss111806546 Jan 25, 2009 (130)
19 1000GENOMES ss113152784 Jan 25, 2009 (130)
20 ILLUMINA-UK ss117501447 Feb 14, 2009 (130)
21 ILLUMINA ss122506374 Dec 01, 2009 (131)
22 ENSEMBL ss135753739 Dec 01, 2009 (131)
23 ENSEMBL ss138218347 Dec 01, 2009 (131)
24 ILLUMINA ss154350500 Dec 01, 2009 (131)
25 GMI ss156227601 Dec 01, 2009 (131)
26 ILLUMINA ss159526815 Dec 01, 2009 (131)
27 ILLUMINA ss160760323 Dec 01, 2009 (131)
28 COMPLETE_GENOMICS ss167912238 Jul 04, 2010 (132)
29 COMPLETE_GENOMICS ss169227107 Jul 04, 2010 (132)
30 ILLUMINA ss172088040 Jul 04, 2010 (132)
31 ILLUMINA ss173969150 Jul 04, 2010 (132)
32 BUSHMAN ss203846748 Jul 04, 2010 (132)
33 BCM-HGSC-SUB ss208677759 Jul 04, 2010 (132)
34 1000GENOMES ss228284897 Jul 14, 2010 (132)
35 1000GENOMES ss237784815 Jul 15, 2010 (132)
36 1000GENOMES ss243966026 Jul 15, 2010 (132)
37 BL ss255514710 May 09, 2011 (134)
38 GMI ss283320079 May 04, 2012 (137)
39 GMI ss287432123 Apr 25, 2013 (138)
40 PJP ss292622529 May 09, 2011 (134)
41 ILLUMINA ss481200419 May 04, 2012 (137)
42 ILLUMINA ss481223508 May 04, 2012 (137)
43 ILLUMINA ss482210694 Sep 08, 2015 (146)
44 ILLUMINA ss485395446 May 04, 2012 (137)
45 ILLUMINA ss537333364 Sep 08, 2015 (146)
46 TISHKOFF ss566167871 Apr 25, 2013 (138)
47 ILLUMINA ss778563607 Sep 08, 2015 (146)
48 ILLUMINA ss783143241 Sep 08, 2015 (146)
49 ILLUMINA ss784099399 Sep 08, 2015 (146)
50 ILLUMINA ss825545649 Apr 01, 2015 (144)
51 ILLUMINA ss832402339 Sep 08, 2015 (146)
52 ILLUMINA ss833038074 Jul 13, 2019 (153)
53 ILLUMINA ss834020547 Sep 08, 2015 (146)
54 EVA-GONL ss994593532 Aug 21, 2014 (142)
55 JMKIDD_LAB ss1082114272 Aug 21, 2014 (142)
56 1000GENOMES ss1364260503 Aug 21, 2014 (142)
57 HAMMER_LAB ss1397766075 Sep 08, 2015 (146)
58 DDI ss1429012756 Apr 01, 2015 (144)
59 EVA_GENOME_DK ss1579459468 Apr 01, 2015 (144)
60 EVA_UK10K_ALSPAC ss1638520002 Apr 01, 2015 (144)
61 EVA_UK10K_TWINSUK ss1681514035 Apr 01, 2015 (144)
62 EVA_DECODE ss1698651095 Apr 01, 2015 (144)
63 EVA_SVP ss1713684588 Apr 01, 2015 (144)
64 ILLUMINA ss1752378332 Sep 08, 2015 (146)
65 HAMMER_LAB ss1809444932 Sep 08, 2015 (146)
66 WEILL_CORNELL_DGM ss1938101767 Feb 12, 2016 (147)
67 ILLUMINA ss1946548254 Feb 12, 2016 (147)
68 ILLUMINA ss1959902477 Feb 12, 2016 (147)
69 GENOMED ss1969104617 Jul 19, 2016 (147)
70 JJLAB ss2029833481 Sep 14, 2016 (149)
71 ILLUMINA ss2095113666 Dec 20, 2016 (150)
72 USC_VALOUEV ss2158386997 Dec 20, 2016 (150)
73 HUMAN_LONGEVITY ss2241736164 Dec 20, 2016 (150)
74 ILLUMINA ss2633783653 Nov 08, 2017 (151)
75 GRF ss2704061531 Nov 08, 2017 (151)
76 ILLUMINA ss2710936534 Nov 08, 2017 (151)
77 GNOMAD ss2965980959 Nov 08, 2017 (151)
78 SWEGEN ss3017947399 Nov 08, 2017 (151)
79 BIOINF_KMB_FNS_UNIBA ss3028750534 Nov 08, 2017 (151)
80 CSHL ss3352444068 Nov 08, 2017 (151)
81 ILLUMINA ss3625785489 Oct 12, 2018 (152)
82 ILLUMINA ss3628362583 Oct 12, 2018 (152)
83 ILLUMINA ss3631741150 Oct 12, 2018 (152)
84 ILLUMINA ss3633246760 Oct 12, 2018 (152)
85 ILLUMINA ss3633960629 Oct 12, 2018 (152)
86 ILLUMINA ss3634829218 Oct 12, 2018 (152)
87 ILLUMINA ss3635645794 Oct 12, 2018 (152)
88 ILLUMINA ss3636519966 Oct 12, 2018 (152)
89 ILLUMINA ss3637397866 Oct 12, 2018 (152)
90 ILLUMINA ss3638338125 Oct 12, 2018 (152)
91 ILLUMINA ss3639173102 Oct 12, 2018 (152)
92 ILLUMINA ss3639600756 Oct 12, 2018 (152)
93 ILLUMINA ss3640536516 Oct 12, 2018 (152)
94 ILLUMINA ss3641126014 Oct 12, 2018 (152)
95 ILLUMINA ss3641422211 Oct 12, 2018 (152)
96 ILLUMINA ss3643301437 Oct 12, 2018 (152)
97 ILLUMINA ss3644778625 Oct 12, 2018 (152)
98 URBANLAB ss3650982710 Oct 12, 2018 (152)
99 ILLUMINA ss3652559956 Oct 12, 2018 (152)
100 EGCUT_WGS ss3684668858 Jul 13, 2019 (153)
101 EVA_DECODE ss3706656822 Jul 13, 2019 (153)
102 ACPOP ss3743293786 Jul 13, 2019 (153)
103 ILLUMINA ss3744195890 Jul 13, 2019 (153)
104 ILLUMINA ss3745129117 Jul 13, 2019 (153)
105 EVA ss3758485211 Jul 13, 2019 (153)
106 PAGE_CC ss3772039555 Jul 13, 2019 (153)
107 ILLUMINA ss3772625374 Jul 13, 2019 (153)
108 PACBIO ss3788612804 Jul 13, 2019 (153)
109 PACBIO ss3793511126 Jul 13, 2019 (153)
110 PACBIO ss3798398298 Jul 13, 2019 (153)
111 KHV_HUMAN_GENOMES ss3821656223 Jul 13, 2019 (153)
112 EVA ss3835614752 Apr 27, 2020 (154)
113 EVA ss3841433460 Apr 27, 2020 (154)
114 EVA ss3846941446 Apr 27, 2020 (154)
115 HGDP ss3847663222 Apr 27, 2020 (154)
116 SGDP_PRJ ss3888834818 Apr 27, 2020 (154)
117 KRGDB ss3939033196 Apr 27, 2020 (154)
118 KOGIC ss3981913287 Apr 27, 2020 (154)
119 EVA ss3984747956 Apr 26, 2021 (155)
120 EVA ss3985871520 Apr 26, 2021 (155)
121 EVA ss4017841037 Apr 26, 2021 (155)
122 TOPMED ss5083987539 Apr 26, 2021 (155)
123 TOMMO_GENOMICS ss5229057852 Apr 26, 2021 (155)
124 1000G_HIGH_COVERAGE ss5308254624 Oct 13, 2022 (156)
125 EVA ss5315999203 Oct 13, 2022 (156)
126 EVA ss5436576665 Oct 13, 2022 (156)
127 HUGCELL_USP ss5500640985 Oct 13, 2022 (156)
128 EVA ss5512172644 Oct 13, 2022 (156)
129 1000G_HIGH_COVERAGE ss5614425183 Oct 13, 2022 (156)
130 SANFORD_IMAGENETICS ss5662963087 Oct 13, 2022 (156)
131 TOMMO_GENOMICS ss5788105326 Oct 13, 2022 (156)
132 EVA ss5800018346 Oct 13, 2022 (156)
133 YY_MCH ss5817859798 Oct 13, 2022 (156)
134 EVA ss5845514181 Oct 13, 2022 (156)
135 EVA ss5847915981 Oct 13, 2022 (156)
136 EVA ss5853090942 Oct 13, 2022 (156)
137 EVA ss5922873187 Oct 13, 2022 (156)
138 EVA ss5957872572 Oct 13, 2022 (156)
139 1000Genomes NC_000020.10 - 17186362 Oct 12, 2018 (152)
140 1000Genomes_30x NC_000020.11 - 17205717 Oct 13, 2022 (156)
141 The Avon Longitudinal Study of Parents and Children NC_000020.10 - 17186362 Oct 12, 2018 (152)
142 Genome-wide autozygosity in Daghestan NC_000020.9 - 17134362 Apr 27, 2020 (154)
143 Genetic variation in the Estonian population NC_000020.10 - 17186362 Oct 12, 2018 (152)
144 The Danish reference pan genome NC_000020.10 - 17186362 Apr 27, 2020 (154)
145 gnomAD - Genomes NC_000020.11 - 17205717 Apr 26, 2021 (155)
146 Genome of the Netherlands Release 5 NC_000020.10 - 17186362 Apr 27, 2020 (154)
147 HGDP-CEPH-db Supplement 1 NC_000020.9 - 17134362 Apr 27, 2020 (154)
148 HapMap NC_000020.11 - 17205717 Apr 27, 2020 (154)
149 KOREAN population from KRGDB NC_000020.10 - 17186362 Apr 27, 2020 (154)
150 Korean Genome Project NC_000020.11 - 17205717 Apr 27, 2020 (154)
151 Northern Sweden NC_000020.10 - 17186362 Jul 13, 2019 (153)
152 The PAGE Study NC_000020.11 - 17205717 Jul 13, 2019 (153)
153 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000020.10 - 17186362 Apr 26, 2021 (155)
154 CNV burdens in cranial meningiomas NC_000020.10 - 17186362 Apr 26, 2021 (155)
155 Qatari NC_000020.10 - 17186362 Apr 27, 2020 (154)
156 SGDP_PRJ NC_000020.10 - 17186362 Apr 27, 2020 (154)
157 Siberian NC_000020.10 - 17186362 Apr 27, 2020 (154)
158 8.3KJPN NC_000020.10 - 17186362 Apr 26, 2021 (155)
159 14KJPN NC_000020.11 - 17205717 Oct 13, 2022 (156)
160 TopMed NC_000020.11 - 17205717 Apr 26, 2021 (155)
161 UK 10K study - Twins NC_000020.10 - 17186362 Oct 12, 2018 (152)
162 A Vietnamese Genetic Variation Database NC_000020.10 - 17186362 Jul 13, 2019 (153)
163 ALFA NC_000020.11 - 17205717 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs17774805 Oct 07, 2004 (123)
rs61197122 May 26, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
46210590, ss3939033196 NC_000020.10:17186361:T:A NC_000020.11:17205716:T:A (self)
280223, 341114, ss78400339, ss85625447, ss91655294, ss111806546, ss113152784, ss117501447, ss167912238, ss169227107, ss203846748, ss208677759, ss255514710, ss283320079, ss287432123, ss292622529, ss481200419, ss825545649, ss1397766075, ss1698651095, ss1713684588, ss3639173102, ss3639600756, ss3643301437, ss3847663222 NC_000020.9:17134361:T:C NC_000020.11:17205716:T:C (self)
77706942, 43023017, 30407106, 5624407, 19170794, 46210590, 16578651, 1097447, 297523, 20143689, 40851798, 10903351, 87027159, 43023017, 9499890, ss228284897, ss237784815, ss243966026, ss481223508, ss482210694, ss485395446, ss537333364, ss566167871, ss778563607, ss783143241, ss784099399, ss832402339, ss833038074, ss834020547, ss994593532, ss1082114272, ss1364260503, ss1429012756, ss1579459468, ss1638520002, ss1681514035, ss1752378332, ss1809444932, ss1938101767, ss1946548254, ss1959902477, ss1969104617, ss2029833481, ss2095113666, ss2158386997, ss2633783653, ss2704061531, ss2710936534, ss2965980959, ss3017947399, ss3352444068, ss3625785489, ss3628362583, ss3631741150, ss3633246760, ss3633960629, ss3634829218, ss3635645794, ss3636519966, ss3637397866, ss3638338125, ss3640536516, ss3641126014, ss3641422211, ss3644778625, ss3652559956, ss3684668858, ss3743293786, ss3744195890, ss3745129117, ss3758485211, ss3772625374, ss3788612804, ss3793511126, ss3798398298, ss3835614752, ss3841433460, ss3888834818, ss3939033196, ss3984747956, ss3985871520, ss4017841037, ss5229057852, ss5315999203, ss5436576665, ss5512172644, ss5662963087, ss5800018346, ss5845514181, ss5847915981, ss5957872572 NC_000020.10:17186361:T:C NC_000020.11:17205716:T:C (self)
101951118, 547882544, 2087251, 38291288, 1261024, 121942430, 359096484, 12577933844, ss2241736164, ss3028750534, ss3650982710, ss3706656822, ss3772039555, ss3821656223, ss3846941446, ss3981913287, ss5083987539, ss5308254624, ss5500640985, ss5614425183, ss5788105326, ss5817859798, ss5853090942, ss5922873187 NC_000020.11:17205716:T:C NC_000020.11:17205716:T:C (self)
ss8354942, ss21795149, ss24594372, ss66845597, ss67437604, ss67791750, ss68425211, ss70855816, ss71442206, ss75897415, ss79215131, ss84453516, ss96188382, ss106181461, ss122506374, ss135753739, ss138218347, ss154350500, ss156227601, ss159526815, ss160760323, ss172088040, ss173969150 NT_011387.8:17126361:T:C NC_000020.11:17205716:T:C (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs6044680
PMID Title Author Year Journal
31647196 Genome-wide association analysis of autism identified multiple loci that have been reported as strong signals for neuropsychiatric disorders. Xia L et al. 2020 Autism research
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07