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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs74045046

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr1:976536 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
C>A / C>G / C>T
Variation Type
SNV Single Nucleotide Variation
Frequency
T=0.172205 (45581/264690, TOPMED)
T=0.176308 (24686/140016, GnomAD)
T=0.16335 (8977/54956, ALFA) (+ 17 more)
T=0.07801 (2204/28254, 14KJPN)
T=0.07860 (1317/16756, 8.3KJPN)
T=0.18995 (2874/15130, ExAC)
T=0.1843 (1180/6404, 1000G_30x)
T=0.1823 (913/5008, 1000G)
T=0.1699 (761/4480, Estonian)
T=0.1611 (621/3854, ALSPAC)
T=0.1456 (540/3708, TWINSUK)
T=0.0465 (136/2922, KOREAN)
T=0.0539 (96/1782, Korea1K)
T=0.128 (77/600, NorthernSweden)
T=0.185 (99/534, MGP)
T=0.338 (73/216, Qatari)
T=0.083 (18/216, Vietnamese)
C=0.433 (58/134, SGDP_PRJ)
T=0.25 (10/40, GENOME_DK)
C=0.45 (10/22, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
PERM1 : Missense Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 71310 C=0.83373 T=0.16627
European Sub 50936 C=0.83831 T=0.16169
African Sub 8944 C=0.7784 T=0.2216
African Others Sub 324 C=0.759 T=0.241
African American Sub 8620 C=0.7791 T=0.2209
Asian Sub 472 C=0.945 T=0.055
East Asian Sub 382 C=0.953 T=0.047
Other Asian Sub 90 C=0.91 T=0.09
Latin American 1 Sub 260 C=0.827 T=0.173
Latin American 2 Sub 4934 C=0.8697 T=0.1303
South Asian Sub 132 C=0.788 T=0.212
Other Sub 5632 C=0.8407 T=0.1593


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 C=0.827795 T=0.172205
gnomAD - Genomes Global Study-wide 140016 C=0.823692 T=0.176308
gnomAD - Genomes European Sub 75876 C=0.83254 T=0.16746
gnomAD - Genomes African Sub 41892 C=0.78005 T=0.21995
gnomAD - Genomes American Sub 13640 C=0.87324 T=0.12676
gnomAD - Genomes Ashkenazi Jewish Sub 3324 C=0.8529 T=0.1471
gnomAD - Genomes East Asian Sub 3132 C=0.9441 T=0.0559
gnomAD - Genomes Other Sub 2152 C=0.8267 T=0.1733
Allele Frequency Aggregator Total Global 54956 C=0.83665 T=0.16335
Allele Frequency Aggregator European Sub 40854 C=0.83671 T=0.16329
Allele Frequency Aggregator Latin American 2 Sub 4934 C=0.8697 T=0.1303
Allele Frequency Aggregator Other Sub 4198 C=0.8414 T=0.1586
Allele Frequency Aggregator African Sub 4106 C=0.7813 T=0.2187
Allele Frequency Aggregator Asian Sub 472 C=0.945 T=0.055
Allele Frequency Aggregator Latin American 1 Sub 260 C=0.827 T=0.173
Allele Frequency Aggregator South Asian Sub 132 C=0.788 T=0.212
14KJPN JAPANESE Study-wide 28254 C=0.92199 T=0.07801
8.3KJPN JAPANESE Study-wide 16756 C=0.92140 T=0.07860
ExAC Global Study-wide 15130 C=0.81005 T=0.18995
ExAC Asian Sub 8152 C=0.8031 T=0.1969
ExAC Europe Sub 5614 C=0.8276 T=0.1724
ExAC African Sub 906 C=0.769 T=0.231
ExAC American Sub 290 C=0.834 T=0.166
ExAC Other Sub 168 C=0.738 T=0.262
1000Genomes_30x Global Study-wide 6404 C=0.8157 T=0.1843
1000Genomes_30x African Sub 1786 C=0.7284 T=0.2716
1000Genomes_30x Europe Sub 1266 C=0.8389 T=0.1611
1000Genomes_30x South Asian Sub 1202 C=0.7662 T=0.2338
1000Genomes_30x East Asian Sub 1170 C=0.9299 T=0.0701
1000Genomes_30x American Sub 980 C=0.869 T=0.131
1000Genomes Global Study-wide 5008 C=0.8177 T=0.1823
1000Genomes African Sub 1322 C=0.7300 T=0.2700
1000Genomes East Asian Sub 1008 C=0.9256 T=0.0744
1000Genomes Europe Sub 1006 C=0.8370 T=0.1630
1000Genomes South Asian Sub 978 C=0.766 T=0.234
1000Genomes American Sub 694 C=0.873 T=0.127
Genetic variation in the Estonian population Estonian Study-wide 4480 C=0.8301 T=0.1699
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 C=0.8389 T=0.1611
UK 10K study - Twins TWIN COHORT Study-wide 3708 C=0.8544 T=0.1456
KOREAN population from KRGDB KOREAN Study-wide 2922 C=0.9535 T=0.0465
Korean Genome Project KOREAN Study-wide 1782 C=0.9461 T=0.0539
Northern Sweden ACPOP Study-wide 600 C=0.872 T=0.128
Medical Genome Project healthy controls from Spanish population Spanish controls Study-wide 534 C=0.815 T=0.185
Qatari Global Study-wide 216 C=0.662 T=0.338
A Vietnamese Genetic Variation Database Global Study-wide 216 C=0.917 T=0.083
SGDP_PRJ Global Study-wide 134 C=0.433 T=0.567
The Danish reference pan genome Danish Study-wide 40 C=0.75 T=0.25
Siberian Global Study-wide 22 C=0.45 T=0.55
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 1 NC_000001.11:g.976536C>A
GRCh38.p14 chr 1 NC_000001.11:g.976536C>G
GRCh38.p14 chr 1 NC_000001.11:g.976536C>T
GRCh37.p13 chr 1 NC_000001.10:g.911916C>A
GRCh37.p13 chr 1 NC_000001.10:g.911916C>G
GRCh37.p13 chr 1 NC_000001.10:g.911916C>T
Gene: PERM1, PPARGC1 and ESRR induced regulator, muscle 1 (minus strand)
Molecule type Change Amino acid[Codon] SO Term
PERM1 transcript variant 1 NM_001291366.2:c.2238G>T R [AGG] > S [AGT] Coding Sequence Variant
PGC-1 and ERR-induced regulator in muscle protein 1 isoform 1 NP_001278295.1:p.Arg746Ser R (Arg) > S (Ser) Missense Variant
PERM1 transcript variant 1 NM_001291366.2:c.2238G>C R [AGG] > S [AGC] Coding Sequence Variant
PGC-1 and ERR-induced regulator in muscle protein 1 isoform 1 NP_001278295.1:p.Arg746Ser R (Arg) > S (Ser) Missense Variant
PERM1 transcript variant 1 NM_001291366.2:c.2238G>A R [AGG] > R [AGA] Coding Sequence Variant
PGC-1 and ERR-induced regulator in muscle protein 1 isoform 1 NP_001278295.1:p.Arg746= R (Arg) > R (Arg) Synonymous Variant
PERM1 transcript variant 2 NM_001291367.2:c.1896G>T R [AGG] > S [AGT] Coding Sequence Variant
PGC-1 and ERR-induced regulator in muscle protein 1 isoform 2 NP_001278296.2:p.Arg632Ser R (Arg) > S (Ser) Missense Variant
PERM1 transcript variant 2 NM_001291367.2:c.1896G>C R [AGG] > S [AGC] Coding Sequence Variant
PGC-1 and ERR-induced regulator in muscle protein 1 isoform 2 NP_001278296.2:p.Arg632Ser R (Arg) > S (Ser) Missense Variant
PERM1 transcript variant 2 NM_001291367.2:c.1896G>A R [AGG] > R [AGA] Coding Sequence Variant
PGC-1 and ERR-induced regulator in muscle protein 1 isoform 2 NP_001278296.2:p.Arg632= R (Arg) > R (Arg) Synonymous Variant
PERM1 transcript variant 3 NM_001369897.1:c.2238G>T R [AGG] > S [AGT] Coding Sequence Variant
PGC-1 and ERR-induced regulator in muscle protein 1 isoform 1 NP_001356826.1:p.Arg746Ser R (Arg) > S (Ser) Missense Variant
PERM1 transcript variant 3 NM_001369897.1:c.2238G>C R [AGG] > S [AGC] Coding Sequence Variant
PGC-1 and ERR-induced regulator in muscle protein 1 isoform 1 NP_001356826.1:p.Arg746Ser R (Arg) > S (Ser) Missense Variant
PERM1 transcript variant 3 NM_001369897.1:c.2238G>A R [AGG] > R [AGA] Coding Sequence Variant
PGC-1 and ERR-induced regulator in muscle protein 1 isoform 1 NP_001356826.1:p.Arg746= R (Arg) > R (Arg) Synonymous Variant
PERM1 transcript variant 4 NM_001369898.1:c.2172G>T R [AGG] > S [AGT] Coding Sequence Variant
PGC-1 and ERR-induced regulator in muscle protein 1 isoform 3 NP_001356827.1:p.Arg724Ser R (Arg) > S (Ser) Missense Variant
PERM1 transcript variant 4 NM_001369898.1:c.2172G>C R [AGG] > S [AGC] Coding Sequence Variant
PGC-1 and ERR-induced regulator in muscle protein 1 isoform 3 NP_001356827.1:p.Arg724Ser R (Arg) > S (Ser) Missense Variant
PERM1 transcript variant 4 NM_001369898.1:c.2172G>A R [AGG] > R [AGA] Coding Sequence Variant
PGC-1 and ERR-induced regulator in muscle protein 1 isoform 3 NP_001356827.1:p.Arg724= R (Arg) > R (Arg) Synonymous Variant
PERM1 transcript variant 5 NM_001394713.1:c.2238G>T R [AGG] > S [AGT] Coding Sequence Variant
PGC-1 and ERR-induced regulator in muscle protein 1 isoform 1 NP_001381642.1:p.Arg746Ser R (Arg) > S (Ser) Missense Variant
PERM1 transcript variant 5 NM_001394713.1:c.2238G>C R [AGG] > S [AGC] Coding Sequence Variant
PGC-1 and ERR-induced regulator in muscle protein 1 isoform 1 NP_001381642.1:p.Arg746Ser R (Arg) > S (Ser) Missense Variant
PERM1 transcript variant 5 NM_001394713.1:c.2238G>A R [AGG] > R [AGA] Coding Sequence Variant
PGC-1 and ERR-induced regulator in muscle protein 1 isoform 1 NP_001381642.1:p.Arg746= R (Arg) > R (Arg) Synonymous Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement C= A G T
GRCh38.p14 chr 1 NC_000001.11:g.976536= NC_000001.11:g.976536C>A NC_000001.11:g.976536C>G NC_000001.11:g.976536C>T
GRCh37.p13 chr 1 NC_000001.10:g.911916= NC_000001.10:g.911916C>A NC_000001.10:g.911916C>G NC_000001.10:g.911916C>T
PERM1 transcript variant 1 NM_001291366.2:c.2238= NM_001291366.2:c.2238G>T NM_001291366.2:c.2238G>C NM_001291366.2:c.2238G>A
PERM1 transcript variant 1 NM_001291366.1:c.2238= NM_001291366.1:c.2238G>T NM_001291366.1:c.2238G>C NM_001291366.1:c.2238G>A
PERM1 transcript variant 2 NM_001291367.2:c.1896= NM_001291367.2:c.1896G>T NM_001291367.2:c.1896G>C NM_001291367.2:c.1896G>A
PERM1 transcript variant 2 NM_001291367.1:c.1956= NM_001291367.1:c.1956G>T NM_001291367.1:c.1956G>C NM_001291367.1:c.1956G>A
MGC13275 transcript NM_032722.2:c.42= NM_032722.2:c.42G>T NM_032722.2:c.42G>C NM_032722.2:c.42G>A
PERM1 transcript variant 3 NM_001369897.1:c.2238= NM_001369897.1:c.2238G>T NM_001369897.1:c.2238G>C NM_001369897.1:c.2238G>A
PERM1 transcript variant 5 NM_001394713.1:c.2238= NM_001394713.1:c.2238G>T NM_001394713.1:c.2238G>C NM_001394713.1:c.2238G>A
PERM1 transcript variant 4 NM_001369898.1:c.2172= NM_001369898.1:c.2172G>T NM_001369898.1:c.2172G>C NM_001369898.1:c.2172G>A
PERM1 transcript NR_027693.1:n.1932= NR_027693.1:n.1932G>T NR_027693.1:n.1932G>C NR_027693.1:n.1932G>A
MGC13275 transcript NM_032722.1:c.42= NM_032722.1:c.42G>T NM_032722.1:c.42G>C NM_032722.1:c.42G>A
PGC-1 and ERR-induced regulator in muscle protein 1 isoform 1 NP_001278295.1:p.Arg746= NP_001278295.1:p.Arg746Ser NP_001278295.1:p.Arg746Ser NP_001278295.1:p.Arg746=
PGC-1 and ERR-induced regulator in muscle protein 1 isoform 2 NP_001278296.2:p.Arg632= NP_001278296.2:p.Arg632Ser NP_001278296.2:p.Arg632Ser NP_001278296.2:p.Arg632=
PGC-1 and ERR-induced regulator in muscle protein 1 isoform 1 NP_001356826.1:p.Arg746= NP_001356826.1:p.Arg746Ser NP_001356826.1:p.Arg746Ser NP_001356826.1:p.Arg746=
PGC-1 and ERR-induced regulator in muscle protein 1 isoform 1 NP_001381642.1:p.Arg746= NP_001381642.1:p.Arg746Ser NP_001381642.1:p.Arg746Ser NP_001381642.1:p.Arg746=
PGC-1 and ERR-induced regulator in muscle protein 1 isoform 3 NP_001356827.1:p.Arg724= NP_001356827.1:p.Arg724Ser NP_001356827.1:p.Arg724Ser NP_001356827.1:p.Arg724=
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

78 SubSNP, 22 Frequency submissions
No Submitter Submission ID Date (Build)
1 ILLUMINA-UK ss118439363 Feb 14, 2009 (130)
2 ILLUMINA ss159848596 Dec 01, 2009 (131)
3 COMPLETE_GENOMICS ss163704448 Jul 04, 2010 (132)
4 ILLUMINA ss168871278 Jul 04, 2010 (132)
5 BUSHMAN ss197887013 Jul 04, 2010 (132)
6 1000GENOMES ss218191235 Jul 14, 2010 (132)
7 1000GENOMES ss230396005 Jul 14, 2010 (132)
8 1000GENOMES ss238115610 Jul 15, 2010 (132)
9 ILLUMINA ss479154489 Sep 08, 2015 (146)
10 ILLUMINA ss479809850 May 04, 2012 (137)
11 ILLUMINA ss482429253 May 04, 2012 (137)
12 CLINSEQ_SNP ss491581749 May 04, 2012 (137)
13 ILLUMINA ss533298005 Sep 08, 2015 (146)
14 TISHKOFF ss553711890 Apr 25, 2013 (138)
15 SSMP ss647517433 Apr 25, 2013 (138)
16 ILLUMINA ss779655993 Sep 08, 2015 (146)
17 ILLUMINA ss781074122 Sep 08, 2015 (146)
18 ILLUMINA ss835129163 Sep 08, 2015 (146)
19 EVA-GONL ss974770702 Aug 21, 2014 (142)
20 JMKIDD_LAB ss1067612982 Aug 21, 2014 (142)
21 1000GENOMES ss1289344917 Aug 21, 2014 (142)
22 DDI ss1425685368 Apr 01, 2015 (144)
23 EVA_GENOME_DK ss1573851550 Apr 01, 2015 (144)
24 EVA_DECODE ss1584130654 Apr 01, 2015 (144)
25 EVA_UK10K_ALSPAC ss1599380320 Apr 01, 2015 (144)
26 EVA_UK10K_TWINSUK ss1642374353 Apr 01, 2015 (144)
27 EVA_EXAC ss1685221616 Apr 01, 2015 (144)
28 EVA_MGP ss1710883537 Apr 01, 2015 (144)
29 HAMMER_LAB ss1793713782 Sep 08, 2015 (146)
30 WEILL_CORNELL_DGM ss1917962228 Feb 12, 2016 (147)
31 JJLAB ss2019499111 Sep 14, 2016 (149)
32 USC_VALOUEV ss2147485649 Dec 20, 2016 (150)
33 HUMAN_LONGEVITY ss2159375057 Dec 20, 2016 (150)
34 ILLUMINA ss2632465602 Nov 08, 2017 (151)
35 GRF ss2697376598 Nov 08, 2017 (151)
36 GNOMAD ss2730992911 Nov 08, 2017 (151)
37 GNOMAD ss2746171614 Nov 08, 2017 (151)
38 GNOMAD ss2750655850 Nov 08, 2017 (151)
39 SWEGEN ss2986151951 Nov 08, 2017 (151)
40 BIOINF_KMB_FNS_UNIBA ss3023513969 Nov 08, 2017 (151)
41 CSHL ss3343273453 Nov 08, 2017 (151)
42 ILLUMINA ss3626006838 Oct 11, 2018 (152)
43 ILLUMINA ss3630505693 Oct 11, 2018 (152)
44 ILLUMINA ss3635978658 Oct 11, 2018 (152)
45 ILLUMINA ss3637732427 Oct 11, 2018 (152)
46 ILLUMINA ss3641566248 Oct 11, 2018 (152)
47 OMUKHERJEE_ADBS ss3646218831 Oct 11, 2018 (152)
48 EGCUT_WGS ss3654263209 Jul 12, 2019 (153)
49 EVA_DECODE ss3685994854 Jul 12, 2019 (153)
50 ACPOP ss3726717480 Jul 12, 2019 (153)
51 EVA ss3745722611 Jul 12, 2019 (153)
52 KHV_HUMAN_GENOMES ss3798745309 Jul 12, 2019 (153)
53 EVA ss3825549038 Apr 25, 2020 (154)
54 EVA ss3825982024 Apr 25, 2020 (154)
55 SGDP_PRJ ss3847999644 Apr 25, 2020 (154)
56 KRGDB ss3892841630 Apr 25, 2020 (154)
57 KOGIC ss3943632910 Apr 25, 2020 (154)
58 FSA-LAB ss3983910454 Apr 25, 2021 (155)
59 FSA-LAB ss3983910455 Apr 25, 2021 (155)
60 EVA ss3986090855 Apr 25, 2021 (155)
61 TOPMED ss4436477378 Apr 25, 2021 (155)
62 TOMMO_GENOMICS ss5142059631 Apr 25, 2021 (155)
63 EVA ss5236862326 Apr 25, 2021 (155)
64 EVA ss5237158370 Apr 25, 2021 (155)
65 1000G_HIGH_COVERAGE ss5240868524 Oct 12, 2022 (156)
66 EVA ss5314585961 Oct 12, 2022 (156)
67 EVA ss5316191938 Oct 12, 2022 (156)
68 HUGCELL_USP ss5442116113 Oct 12, 2022 (156)
69 1000G_HIGH_COVERAGE ss5512495296 Oct 12, 2022 (156)
70 EVA ss5623985544 Oct 12, 2022 (156)
71 SANFORD_IMAGENETICS ss5624752530 Oct 12, 2022 (156)
72 TOMMO_GENOMICS ss5666201390 Oct 12, 2022 (156)
73 YY_MCH ss5800245129 Oct 12, 2022 (156)
74 EVA ss5831420584 Oct 12, 2022 (156)
75 EVA ss5848243233 Oct 12, 2022 (156)
76 EVA ss5906709724 Oct 12, 2022 (156)
77 EVA ss5936585160 Oct 12, 2022 (156)
78 EVA ss5979926221 Oct 12, 2022 (156)
79 1000Genomes NC_000001.10 - 911916 Oct 11, 2018 (152)
80 1000Genomes_30x NC_000001.11 - 976536 Oct 12, 2022 (156)
81 The Avon Longitudinal Study of Parents and Children NC_000001.10 - 911916 Oct 11, 2018 (152)
82 Genetic variation in the Estonian population NC_000001.10 - 911916 Oct 11, 2018 (152)
83 ExAC NC_000001.10 - 911916 Oct 11, 2018 (152)
84 The Danish reference pan genome NC_000001.10 - 911916 Apr 25, 2020 (154)
85 gnomAD - Genomes NC_000001.11 - 976536 Apr 25, 2021 (155)
86 gnomAD - Exomes

Submission ignored due to conflicting rows:
Row 7764 (NC_000001.10:911915:C:C 150221/150222, NC_000001.10:911915:C:A 1/150222)
Row 7765 (NC_000001.10:911915:C:C 126492/150222, NC_000001.10:911915:C:T 23730/150222)

- Jul 12, 2019 (153)
87 gnomAD - Exomes

Submission ignored due to conflicting rows:
Row 7764 (NC_000001.10:911915:C:C 150221/150222, NC_000001.10:911915:C:A 1/150222)
Row 7765 (NC_000001.10:911915:C:C 126492/150222, NC_000001.10:911915:C:T 23730/150222)

- Jul 12, 2019 (153)
88 KOREAN population from KRGDB NC_000001.10 - 911916 Apr 25, 2020 (154)
89 Korean Genome Project NC_000001.11 - 976536 Apr 25, 2020 (154)
90 Medical Genome Project healthy controls from Spanish population NC_000001.10 - 911916 Apr 25, 2020 (154)
91 Northern Sweden NC_000001.10 - 911916 Jul 12, 2019 (153)
92 Qatari NC_000001.10 - 911916 Apr 25, 2020 (154)
93 SGDP_PRJ NC_000001.10 - 911916 Apr 25, 2020 (154)
94 Siberian NC_000001.10 - 911916 Apr 25, 2020 (154)
95 8.3KJPN NC_000001.10 - 911916 Apr 25, 2021 (155)
96 14KJPN NC_000001.11 - 976536 Oct 12, 2022 (156)
97 TopMed NC_000001.11 - 976536 Apr 25, 2021 (155)
98 UK 10K study - Twins NC_000001.10 - 911916 Oct 11, 2018 (152)
99 A Vietnamese Genetic Variation Database NC_000001.10 - 911916 Jul 12, 2019 (153)
100 ALFA NC_000001.11 - 976536 Apr 25, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs117293084 Aug 16, 2010 (132)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss2730992911 NC_000001.10:911915:C:A NC_000001.11:976535:C:A (self)
ss197887013 NC_000001.9:901778:C:G NC_000001.11:976535:C:G (self)
ss118439363, ss163704448, ss482429253, ss491581749, ss1584130654 NC_000001.9:901778:C:T NC_000001.11:976535:C:T (self)
9870, 2495, 1457, 4395044, 1358784, 19024, 289, 2345, 4158, 16624, 2003, 28938, 2495, 580, ss218191235, ss230396005, ss238115610, ss479154489, ss479809850, ss533298005, ss553711890, ss647517433, ss779655993, ss781074122, ss835129163, ss974770702, ss1067612982, ss1289344917, ss1425685368, ss1573851550, ss1599380320, ss1642374353, ss1685221616, ss1710883537, ss1793713782, ss1917962228, ss2019499111, ss2147485649, ss2632465602, ss2697376598, ss2730992911, ss2746171614, ss2750655850, ss2986151951, ss3343273453, ss3626006838, ss3630505693, ss3635978658, ss3637732427, ss3641566248, ss3646218831, ss3654263209, ss3726717480, ss3745722611, ss3825549038, ss3825982024, ss3847999644, ss3892841630, ss3983910454, ss3983910455, ss3986090855, ss5142059631, ss5314585961, ss5316191938, ss5623985544, ss5624752530, ss5831420584, ss5848243233, ss5936585160, ss5979926221 NC_000001.10:911915:C:T NC_000001.11:976535:C:T (self)
21231, 103072, 10911, 38494, 83713, 1076002614, ss2159375057, ss3023513969, ss3685994854, ss3798745309, ss3943632910, ss4436477378, ss5236862326, ss5237158370, ss5240868524, ss5442116113, ss5512495296, ss5666201390, ss5800245129, ss5906709724 NC_000001.11:976535:C:T NC_000001.11:976535:C:T (self)
ss159848596, ss168871278 NT_004350.19:390547:C:T NC_000001.11:976535:C:T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs74045046

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07